RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	CCDC61	Q9Y6R9	512 aa		14.25	□□□□□ -0.13
CCDC66-222	ENST00000494672	GALR2	O43603	387 aa	Predicted RBP	14.21	□□□□□ -0.13
CCDC66-222	ENST00000494672	DCBLD2	Q96PD2	775 aa		14.21	□□□□□ -0.13
CCDC66-222	ENST00000494672	FAM212A	Q96EL1	285 aa		14.2	□□□□□ -0.14
CCDC66-222	ENST00000494672	DCAF8	Q5TAQ9	597 aa		14.15	□□□□□ -0.14
CCDC66-222	ENST00000494672	KIF12	Q96FN5	646 aa		14.15	□□□□□ -0.14
CCDC66-222	ENST00000494672	POTEI	P0CG38	1075 aa		14.13	□□□□□ -0.15
CCDC66-222	ENST00000494672	MS4A3	Q96HJ5	214 aa		14.13	□□□□□ -0.15
CCDC66-222	ENST00000494672	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.12	□□□□□ -0.15
CCDC66-222	ENST00000494672	MAP3K13	O43283	966 aa		14.08	□□□□□ -0.16
CCDC66-222	ENST00000494672	SPOCK2	Q92563	424 aa		14.07	□□□□□ -0.16
CCDC66-222	ENST00000494672	GSE1	Q14687	1217 aa		14.05	□□□□□ -0.16
CCDC66-222	ENST00000494672	SGIP1	Q9BQI5	828 aa		14.04	□□□□□ -0.16
CCDC66-222	ENST00000494672	PCDHB13	Q9Y5F0	798 aa		14.02	□□□□□ -0.17
CCDC66-222	ENST00000494672	PYGB	P11216	843 aa		13.97	□□□□□ -0.17
CCDC66-222	ENST00000494672	ASTL	Q6HA08	431 aa	Predicted RBP	13.96	□□□□□ -0.17
CCDC66-222	ENST00000494672	ATMIN	O43313	823 aa	Predicted RBP	13.95	□□□□□ -0.18
CCDC66-222	ENST00000494672	TIE1	P35590	1138 aa		13.93	□□□□□ -0.18
CCDC66-222	ENST00000494672	IFNL1	Q8IU54	200 aa		13.92	□□□□□ -0.18
CCDC66-222	ENST00000494672	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.92	□□□□□ -0.18
CCDC66-222	ENST00000494672	LHX8	Q68G74	356 aa		13.91	□□□□□ -0.18
CCDC66-222	ENST00000494672	TRPC6	Q9Y210	931 aa		13.91	□□□□□ -0.18
CCDC66-222	ENST00000494672	PELP1	Q8IZL8	1130 aa	Known RBP	13.89	□□□□□ -0.19
CCDC66-222	ENST00000494672	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.89	□□□□□ -0.19
CCDC66-222	ENST00000494672	CHRM1	P11229	460 aa	Predicted RBP	13.88	□□□□□ -0.19
CCDC66-222	ENST00000494672	ATN1	P54259	1190 aa	Predicted RBP	13.87	□□□□□ -0.19
CCDC66-222	ENST00000494672	SLC39A7	Q92504	469 aa		13.85	□□□□□ -0.19
CCDC66-222	ENST00000494672	C7	P10643	843 aa		13.84	□□□□□ -0.19
CCDC66-222	ENST00000494672	TTLL13P	A6NNM8	815 aa		13.83	□□□□□ -0.2
CCDC66-222	ENST00000494672	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.82	□□□□□ -0.2
CCDC66-222	ENST00000494672	PCDHB8	Q9UN66	801 aa		13.82	□□□□□ -0.2
CCDC66-222	ENST00000494672	METRN	Q9UJH8	293 aa		13.8	□□□□□ -0.2
CCDC66-222	ENST00000494672	TMEM106C	Q9BVX2	250 aa		13.79	□□□□□ -0.2
CCDC66-222	ENST00000494672	TRIM41	Q8WV44	630 aa		13.78	□□□□□ -0.2
CCDC66-222	ENST00000494672	TRIM35	Q9UPQ4	493 aa		13.75	□□□□□ -0.21
CCDC66-222	ENST00000494672	IER5L	Q5T953	404 aa		13.7	□□□□□ -0.22
CCDC66-222	ENST00000494672	SEC24B	O95487	1268 aa		13.68	□□□□□ -0.22
CCDC66-222	ENST00000494672	POTEB2	H3BUK9	544 aa		13.67	□□□□□ -0.22
CCDC66-222	ENST00000494672	PSEN1	P49768	467 aa		13.66	□□□□□ -0.22
CCDC66-222	ENST00000494672	PDAP1	Q13442	181 aa	Known RBP	13.65	□□□□□ -0.22
CCDC66-222	ENST00000494672	GOLGA2	Q08379	1002 aa		13.62	□□□□□ -0.23
CCDC66-222	ENST00000494672	POTEF	A5A3E0	1075 aa		13.61	□□□□□ -0.23
CCDC66-222	ENST00000494672	COLQ	Q9Y215	455 aa	Predicted RBP	13.6	□□□□□ -0.23
CCDC66-222	ENST00000494672	MAMSTR	Q6ZN01	415 aa		13.58	□□□□□ -0.24
CCDC66-222	ENST00000494672	PLCG2	P16885	1265 aa		13.56	□□□□□ -0.24
CCDC66-222	ENST00000494672	OTUD5	Q96G74	571 aa		13.56	□□□□□ -0.24
CCDC66-222	ENST00000494672	MKRN3	Q13064	507 aa	Known RBP	13.55	□□□□□ -0.24
CCDC66-222	ENST00000494672	RIOK3	O14730	519 aa	Known RBP	13.54	□□□□□ -0.24
CCDC66-222	ENST00000494672	IRX5	P78411	483 aa	Predicted RBP	13.54	□□□□□ -0.24
CCDC66-222	ENST00000494672	POTEJ	P0CG39	1038 aa		13.53	□□□□□ -0.24
CCDC66-222	ENST00000494672	OCEL1	Q9H607	264 aa		13.53	□□□□□ -0.24
CCDC66-222	ENST00000494672	ECM2	O94769	699 aa	Predicted RBP	13.51	□□□□□ -0.25
CCDC66-222	ENST00000494672	SCUBE2	Q9NQ36	999 aa		13.51	□□□□□ -0.25
CCDC66-222	ENST00000494672	RNF25	Q96BH1	459 aa	Predicted RBP	13.49	□□□□□ -0.25
CCDC66-222	ENST00000494672	CABP2	Q9NPB3	220 aa		13.49	□□□□□ -0.25
CCDC66-222	ENST00000494672	VGF	O15240	615 aa	Predicted RBP	13.48	□□□□□ -0.25
CCDC66-222	ENST00000494672	TAOK2	Q9UL54	1235 aa		13.48	□□□□□ -0.25
CCDC66-222	ENST00000494672	PKD2	Q13563	968 aa		13.46	□□□□□ -0.25
CCDC66-222	ENST00000494672	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.44	□□□□□ -0.26	2e-7	■■■■■ 28
CCDC66-222	ENST00000494672	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.42	□□□□□ -0.26
CCDC66-222	ENST00000494672	ZFP91	Q96JP5	570 aa	Predicted RBP	13.42	□□□□□ -0.26
CCDC66-222	ENST00000494672	PDCD7	Q8N8D1	485 aa	Known RBP	13.39	□□□□□ -0.27
CCDC66-222	ENST00000494672	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.37	□□□□□ -0.27
CCDC66-222	ENST00000494672	EFCAB3	Q8N7B9	438 aa		13.36	□□□□□ -0.27
CCDC66-222	ENST00000494672	RGL2	O15211	777 aa		13.34	□□□□□ -0.27
CCDC66-222	ENST00000494672	ILDR1	Q86SU0	546 aa	Predicted RBP	13.34	□□□□□ -0.27
CCDC66-222	ENST00000494672	SOX12	O15370	315 aa		13.31	□□□□□ -0.28
CCDC66-222	ENST00000494672	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.31	□□□□□ -0.28
CCDC66-222	ENST00000494672	STK25	O00506	426 aa		13.29	□□□□□ -0.28
CCDC66-222	ENST00000494672	SLAIN1	Q8ND83	568 aa		13.29	□□□□□ -0.28
CCDC66-222	ENST00000494672	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.29	□□□□□ -0.28
CCDC66-222	ENST00000494672	STK24	Q9Y6E0	443 aa		13.29	□□□□□ -0.28
CCDC66-222	ENST00000494672		G3V3G9	751 aa		13.27	□□□□□ -0.29
CCDC66-222	ENST00000494672	DPY19L2	Q6NUT2	758 aa		13.27	□□□□□ -0.29
CCDC66-222	ENST00000494672	C3orf67	Q6ZVT6	689 aa		13.25	□□□□□ -0.29
CCDC66-222	ENST00000494672	BOLA1	Q9Y3E2	137 aa		13.21	□□□□□ -0.29
CCDC66-222	ENST00000494672	PHF8	Q9UPP1	1060 aa		13.2	□□□□□ -0.3
CCDC66-222	ENST00000494672	NLRP6	P59044	892 aa		13.19	□□□□□ -0.3
CCDC66-222	ENST00000494672	FAM163A	Q96GL9	167 aa	Predicted RBP	13.19	□□□□□ -0.3
CCDC66-222	ENST00000494672	MS4A4A	Q96JQ5	239 aa		13.13	□□□□□ -0.31
CCDC66-222	ENST00000494672	SNPH	O15079	494 aa		13.12	□□□□□ -0.31
CCDC66-222	ENST00000494672	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.12	□□□□□ -0.31
CCDC66-222	ENST00000494672	FBXO22	Q8NEZ5	403 aa		13.11	□□□□□ -0.31
CCDC66-222	ENST00000494672	MFRP	Q9BY79	579 aa		13.11	□□□□□ -0.31
CCDC66-222	ENST00000494672	HS6ST3	Q8IZP7	471 aa		13.09	□□□□□ -0.31
CCDC66-222	ENST00000494672	CHGA	P10645	457 aa	Known RBP	13.08	□□□□□ -0.32
CCDC66-222	ENST00000494672	MICALL2	Q8IY33	904 aa		13.08	□□□□□ -0.32
CCDC66-222	ENST00000494672	POTEM	A6NI47	508 aa		13.05	□□□□□ -0.32
CCDC66-222	ENST00000494672	POTEG	Q6S5H5	508 aa		13.04	□□□□□ -0.32
CCDC66-222	ENST00000494672	LCE2D	Q5TA82	110 aa	Predicted RBP	13.03	□□□□□ -0.32
CCDC66-222	ENST00000494672	ST18	O60284	1047 aa		13.01	□□□□□ -0.33
CCDC66-222	ENST00000494672	DCAF8L2	P0C7V8	631 aa		12.99	□□□□□ -0.33
CCDC66-222	ENST00000494672	DNAJC5	Q9H3Z4	198 aa		12.96	□□□□□ -0.33
CCDC66-222	ENST00000494672	TMEM92	Q6UXU6	159 aa		12.92	□□□□□ -0.34
CCDC66-222	ENST00000494672	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.91	□□□□□ -0.34
CCDC66-222	ENST00000494672	RYDEN	Q9NUL5	291 aa	Known RBP	12.91	□□□□□ -0.34
CCDC66-222	ENST00000494672	DOK7	Q18PE1	504 aa		12.9	□□□□□ -0.34
CCDC66-222	ENST00000494672	PPP1R37	O75864	691 aa		12.89	□□□□□ -0.35
CCDC66-222	ENST00000494672	PCDH10	Q9P2E7	1040 aa		12.89	□□□□□ -0.35
CCDC66-222	ENST00000494672	HOXB3	P14651	431 aa	Predicted RBP	12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms