RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
CLHC1-213ENST00000494539 PHF12Q96QT6 1004 aa9.82□□□□□ -0.84
CLHC1-213ENST00000494539 IFNLR1Q8IU57 520 aaPredicted RBP9.76□□□□□ -0.85
CLHC1-213ENST00000494539 OTUD5Q96G74 571 aa9.76□□□□□ -0.85
CLHC1-213ENST00000494539 NUBP1P53384 320 aa9.75□□□□□ -0.85
CLHC1-213ENST00000494539 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
CLHC1-213ENST00000494539 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
CLHC1-213ENST00000494539 SPOCK2Q92563 424 aa9.73□□□□□ -0.85
CLHC1-213ENST00000494539 TSPYL2Q9H2G4 693 aaPredicted RBP9.73□□□□□ -0.85
CLHC1-213ENST00000494539 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
CLHC1-213ENST00000494539 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
CLHC1-213ENST00000494539 MS4A3Q96HJ5 214 aa9.68□□□□□ -0.86
CLHC1-213ENST00000494539 CCDC61Q9Y6R9 512 aa9.68□□□□□ -0.86
CLHC1-213ENST00000494539 GSE1Q14687 1217 aa9.67□□□□□ -0.86
CLHC1-213ENST00000494539 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
CLHC1-213ENST00000494539 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
CLHC1-213ENST00000494539 SLC39A7Q92504 469 aa9.66□□□□□ -0.86
CLHC1-213ENST00000494539 POTEMA6NI47 508 aa9.65□□□□□ -0.86
CLHC1-213ENST00000494539 C7P10643 843 aa9.65□□□□□ -0.86
CLHC1-213ENST00000494539 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
CLHC1-213ENST00000494539 ATMINO43313 823 aaPredicted RBP9.63□□□□□ -0.87
CLHC1-213ENST00000494539 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
CLHC1-213ENST00000494539 MAMSTRQ6ZN01 415 aa9.62□□□□□ -0.87
CLHC1-213ENST00000494539 KIF12Q96FN5 646 aa9.59□□□□□ -0.87
CLHC1-213ENST00000494539 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
CLHC1-213ENST00000494539 SGIP1Q9BQI5 828 aa9.57□□□□□ -0.88
CLHC1-213ENST00000494539 SCUBE2Q9NQ36 999 aa9.56□□□□□ -0.88
CLHC1-213ENST00000494539 TRIM41Q8WV44 630 aa9.55□□□□□ -0.88
CLHC1-213ENST00000494539 MAP3K13O43283 966 aa9.54□□□□□ -0.88
CLHC1-213ENST00000494539 ATN1P54259 1190 aaPredicted RBP9.54□□□□□ -0.88
CLHC1-213ENST00000494539 PYGBP11216 843 aa9.53□□□□□ -0.88
CLHC1-213ENST00000494539 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
CLHC1-213ENST00000494539 PCDHB13Q9Y5F0 798 aa9.53□□□□□ -0.88
CLHC1-213ENST00000494539 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
CLHC1-213ENST00000494539 CHRM1P11229 460 aaPredicted RBP9.52□□□□□ -0.89
CLHC1-213ENST00000494539 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
CLHC1-213ENST00000494539 BMP2KQ9NSY1 1161 aaPredicted RBP9.49□□□□□ -0.89
CLHC1-213ENST00000494539 ZNF467Q7Z7K2 595 aaPredicted RBP9.48□□□□□ -0.89
CLHC1-213ENST00000494539 TIE1P35590 1138 aa9.46□□□□□ -0.9
CLHC1-213ENST00000494539 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
CLHC1-213ENST00000494539 SEC24BO95487 1268 aa9.45□□□□□ -0.9
CLHC1-213ENST00000494539 TRPC6Q9Y210 931 aa9.44□□□□□ -0.9
CLHC1-213ENST00000494539 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
CLHC1-213ENST00000494539 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
CLHC1-213ENST00000494539 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
CLHC1-213ENST00000494539 ECM2O94769 699 aaPredicted RBP9.38□□□□□ -0.91
CLHC1-213ENST00000494539 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
CLHC1-213ENST00000494539 PKD2Q13563 968 aa9.37□□□□□ -0.91
CLHC1-213ENST00000494539 TMEM106CQ9BVX2 250 aa9.37□□□□□ -0.91
CLHC1-213ENST00000494539 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
CLHC1-213ENST00000494539 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
CLHC1-213ENST00000494539 COLQQ9Y215 455 aaPredicted RBP9.36□□□□□ -0.91
CLHC1-213ENST00000494539 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
CLHC1-213ENST00000494539 IER5LQ5T953 404 aa9.35□□□□□ -0.91
CLHC1-213ENST00000494539 TAOK2Q9UL54 1235 aa9.35□□□□□ -0.91
CLHC1-213ENST00000494539 PSEN1P49768 467 aa9.34□□□□□ -0.91
CLHC1-213ENST00000494539 VGFO15240 615 aaPredicted RBP9.31□□□□□ -0.92
CLHC1-213ENST00000494539 RNF25Q96BH1 459 aaPredicted RBP9.31□□□□□ -0.92
CLHC1-213ENST00000494539 GOLGA2Q08379 1002 aa9.29□□□□□ -0.92
CLHC1-213ENST00000494539 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
CLHC1-213ENST00000494539 PLCG2P16885 1265 aa9.27□□□□□ -0.93
CLHC1-213ENST00000494539 RGL2O15211 777 aa9.26□□□□□ -0.93
CLHC1-213ENST00000494539 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
CLHC1-213ENST00000494539 CDAN1Q8IWY9 1227 aa9.26□□□□□ -0.93
CLHC1-213ENST00000494539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.23□□□□□ -0.93
CLHC1-213ENST00000494539 MKRN3Q13064 507 aaKnown RBP9.23□□□□□ -0.93
CLHC1-213ENST00000494539 ZFP91Q96JP5 570 aaPredicted RBP9.23□□□□□ -0.93
CLHC1-213ENST00000494539 CABP2Q9NPB3 220 aa9.22□□□□□ -0.93
CLHC1-213ENST00000494539 ST18O60284 1047 aa9.2□□□□□ -0.94
CLHC1-213ENST00000494539 STK25O00506 426 aa9.18□□□□□ -0.94
CLHC1-213ENST00000494539 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
CLHC1-213ENST00000494539 IRX5P78411 483 aaPredicted RBP9.17□□□□□ -0.94
CLHC1-213ENST00000494539 OCEL1Q9H607 264 aa9.17□□□□□ -0.94
CLHC1-213ENST00000494539 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
CLHC1-213ENST00000494539 SNPHO15079 494 aa9.14□□□□□ -0.95
CLHC1-213ENST00000494539 RTN4Q9NQC3 1192 aaKnown RBP9.14□□□□□ -0.95
CLHC1-213ENST00000494539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.955e-7■□□□□ 10.4
CLHC1-213ENST00000494539 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.14□□□□□ -0.95
CLHC1-213ENST00000494539 EFCAB3Q8N7B9 438 aa9.13□□□□□ -0.95
CLHC1-213ENST00000494539 SOX12O15370 315 aa9.12□□□□□ -0.95
CLHC1-213ENST00000494539 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
CLHC1-213ENST00000494539 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
CLHC1-213ENST00000494539 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
CLHC1-213ENST00000494539 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
CLHC1-213ENST00000494539 PDCD7Q8N8D1 485 aaKnown RBP9.1□□□□□ -0.95
CLHC1-213ENST00000494539 CHGAP10645 457 aaKnown RBP9.09□□□□□ -0.95
CLHC1-213ENST00000494539 L3MBTL3Q96JM7 780 aaPredicted RBP9.07□□□□□ -0.96
CLHC1-213ENST00000494539 NLRP6P59044 892 aa9.06□□□□□ -0.96
CLHC1-213ENST00000494539 C3orf67Q6ZVT6 689 aa9.06□□□□□ -0.96
CLHC1-213ENST00000494539 G3V3G9 751 aa9.05□□□□□ -0.96
CLHC1-213ENST00000494539 MARVELD3Q96A59 401 aa9.04□□□□□ -0.96
CLHC1-213ENST00000494539 MMRN1Q13201 1228 aa9.03□□□□□ -0.96
CLHC1-213ENST00000494539 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
CLHC1-213ENST00000494539 PHF8Q9UPP1 1060 aa9.03□□□□□ -0.96
CLHC1-213ENST00000494539 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
CLHC1-213ENST00000494539 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
CLHC1-213ENST00000494539 FBXO22Q8NEZ5 403 aa9□□□□□ -0.97
CLHC1-213ENST00000494539 RYDENQ9NUL5 291 aaKnown RBP9□□□□□ -0.97
CLHC1-213ENST00000494539 EMP3P54852 163 aa8.99□□□□□ -0.97
CLHC1-213ENST00000494539 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms