RNA–Protein interactions for RNA: ENST00000494509.1

AC055758.1-201, humanhuman

TSL 3 BASIC

Gene AC055758.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055758.1-201ENST00000494509 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
AC055758.1-201ENST00000494509 FKBP8Q14318 412 aa13.7□□□□□ -0.22
AC055758.1-201ENST00000494509 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
AC055758.1-201ENST00000494509 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
AC055758.1-201ENST00000494509 KIF12Q96FN5 646 aa13.67□□□□□ -0.22
AC055758.1-201ENST00000494509 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
AC055758.1-201ENST00000494509 TRPC6Q9Y210 931 aa13.66□□□□□ -0.22
AC055758.1-201ENST00000494509 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
AC055758.1-201ENST00000494509 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
AC055758.1-201ENST00000494509 MAP3K13O43283 966 aa13.6□□□□□ -0.23
AC055758.1-201ENST00000494509 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
AC055758.1-201ENST00000494509 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
AC055758.1-201ENST00000494509 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
AC055758.1-201ENST00000494509 NUBP1P53384 320 aa13.56□□□□□ -0.24
AC055758.1-201ENST00000494509 BMP2KQ9NSY1 1161 aaPredicted RBP13.56□□□□□ -0.24
AC055758.1-201ENST00000494509 SLC39A7Q92504 469 aa13.54□□□□□ -0.24
AC055758.1-201ENST00000494509 C7P10643 843 aa13.51□□□□□ -0.25
AC055758.1-201ENST00000494509 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
AC055758.1-201ENST00000494509 TIE1P35590 1138 aa13.46□□□□□ -0.25
AC055758.1-201ENST00000494509 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
AC055758.1-201ENST00000494509 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
AC055758.1-201ENST00000494509 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
AC055758.1-201ENST00000494509 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
AC055758.1-201ENST00000494509 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
AC055758.1-201ENST00000494509 SGIP1Q9BQI5 828 aa13.37□□□□□ -0.27
AC055758.1-201ENST00000494509 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
AC055758.1-201ENST00000494509 TRIM35Q9UPQ4 493 aa13.33□□□□□ -0.28
AC055758.1-201ENST00000494509 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
AC055758.1-201ENST00000494509 POTEMA6NI47 508 aa13.28□□□□□ -0.28
AC055758.1-201ENST00000494509 PYGBP11216 843 aa13.28□□□□□ -0.28
AC055758.1-201ENST00000494509 LCE2DQ5TA82 110 aaPredicted RBP13.28□□□□□ -0.28
AC055758.1-201ENST00000494509 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
AC055758.1-201ENST00000494509 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
AC055758.1-201ENST00000494509 TMEM106CQ9BVX2 250 aa13.26□□□□□ -0.29
AC055758.1-201ENST00000494509 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
AC055758.1-201ENST00000494509 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
AC055758.1-201ENST00000494509 SEC24BO95487 1268 aa13.24□□□□□ -0.29
AC055758.1-201ENST00000494509 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
AC055758.1-201ENST00000494509 IER5LQ5T953 404 aa13.22□□□□□ -0.29
AC055758.1-201ENST00000494509 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
AC055758.1-201ENST00000494509 PCDHB8Q9UN66 801 aa13.21□□□□□ -0.29
AC055758.1-201ENST00000494509 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
AC055758.1-201ENST00000494509 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
AC055758.1-201ENST00000494509 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
AC055758.1-201ENST00000494509 PLCG2P16885 1265 aa13.08□□□□□ -0.32
AC055758.1-201ENST00000494509 GSE1Q14687 1217 aa13.06□□□□□ -0.32
AC055758.1-201ENST00000494509 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
AC055758.1-201ENST00000494509 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
AC055758.1-201ENST00000494509 OCEL1Q9H607 264 aa13.02□□□□□ -0.33
AC055758.1-201ENST00000494509 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
AC055758.1-201ENST00000494509 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
AC055758.1-201ENST00000494509 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
AC055758.1-201ENST00000494509 ABCC9O60706 1549 aa12.95□□□□□ -0.34
AC055758.1-201ENST00000494509 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
AC055758.1-201ENST00000494509 PSEN1P49768 467 aa12.94□□□□□ -0.34
AC055758.1-201ENST00000494509 ST18O60284 1047 aa12.93□□□□□ -0.34
AC055758.1-201ENST00000494509 PCDH10Q9P2E7 1040 aa12.93□□□□□ -0.34
AC055758.1-201ENST00000494509 CIZ1Q9ULV3 898 aaPredicted RBP12.91□□□□□ -0.34
AC055758.1-201ENST00000494509 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
AC055758.1-201ENST00000494509 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
AC055758.1-201ENST00000494509 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
AC055758.1-201ENST00000494509 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
AC055758.1-201ENST00000494509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC055758.1-201ENST00000494509 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
AC055758.1-201ENST00000494509 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
AC055758.1-201ENST00000494509 ILDR1Q86SU0 546 aaPredicted RBP12.82□□□□□ -0.36
AC055758.1-201ENST00000494509 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
AC055758.1-201ENST00000494509 L3MBTL3Q96JM7 780 aaPredicted RBP12.76□□□□□ -0.37
AC055758.1-201ENST00000494509 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
AC055758.1-201ENST00000494509 MARVELD3Q96A59 401 aa12.72□□□□□ -0.37
AC055758.1-201ENST00000494509 SNPHO15079 494 aa12.69□□□□□ -0.38
AC055758.1-201ENST00000494509 RNF25Q96BH1 459 aaPredicted RBP12.68□□□□□ -0.38
AC055758.1-201ENST00000494509 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
AC055758.1-201ENST00000494509 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
AC055758.1-201ENST00000494509 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
AC055758.1-201ENST00000494509 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
AC055758.1-201ENST00000494509 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
AC055758.1-201ENST00000494509 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
AC055758.1-201ENST00000494509 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
AC055758.1-201ENST00000494509 HOXB3P14651 431 aaPredicted RBP12.58□□□□□ -0.4
AC055758.1-201ENST00000494509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
AC055758.1-201ENST00000494509 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
AC055758.1-201ENST00000494509 EMP3P54852 163 aa12.56□□□□□ -0.4
AC055758.1-201ENST00000494509 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
AC055758.1-201ENST00000494509 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
AC055758.1-201ENST00000494509 G3V3G9 751 aa12.53□□□□□ -0.4
AC055758.1-201ENST00000494509 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
AC055758.1-201ENST00000494509 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
AC055758.1-201ENST00000494509 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
AC055758.1-201ENST00000494509 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
AC055758.1-201ENST00000494509 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
AC055758.1-201ENST00000494509 MMRN1Q13201 1228 aa12.49□□□□□ -0.41
AC055758.1-201ENST00000494509 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
AC055758.1-201ENST00000494509 KRTAP3-3Q9BYR6 98 aa12.49□□□□□ -0.41
AC055758.1-201ENST00000494509 KRTAP3-2Q9BYR7 98 aa12.49□□□□□ -0.41
AC055758.1-201ENST00000494509 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
AC055758.1-201ENST00000494509 SOX12O15370 315 aa12.45□□□□□ -0.42
AC055758.1-201ENST00000494509 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
AC055758.1-201ENST00000494509 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
AC055758.1-201ENST00000494509 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms