RNA–Protein interactions for RNA: ENST00000494444.2

PTP4A2-207, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 678 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-207ENST00000494444 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
PTP4A2-207ENST00000494444 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
PTP4A2-207ENST00000494444 POTEMA6NI47 508 aa12.26□□□□□ -0.45
PTP4A2-207ENST00000494444 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
PTP4A2-207ENST00000494444 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
PTP4A2-207ENST00000494444 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
PTP4A2-207ENST00000494444 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-207ENST00000494444 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
PTP4A2-207ENST00000494444 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
PTP4A2-207ENST00000494444 METRNQ9UJH8 293 aa12.19□□□□□ -0.46
PTP4A2-207ENST00000494444 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
PTP4A2-207ENST00000494444 ATMINO43313 823 aaPredicted RBP12.17□□□□□ -0.46
PTP4A2-207ENST00000494444 C7P10643 843 aa12.16□□□□□ -0.46
PTP4A2-207ENST00000494444 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
PTP4A2-207ENST00000494444 NUBP1P53384 320 aa12.15□□□□□ -0.46
PTP4A2-207ENST00000494444 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
PTP4A2-207ENST00000494444 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
PTP4A2-207ENST00000494444 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
PTP4A2-207ENST00000494444 MAMSTRQ6ZN01 415 aa12.09□□□□□ -0.47
PTP4A2-207ENST00000494444 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
PTP4A2-207ENST00000494444 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
PTP4A2-207ENST00000494444 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
PTP4A2-207ENST00000494444 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
PTP4A2-207ENST00000494444 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
PTP4A2-207ENST00000494444 LCE2DQ5TA82 110 aaPredicted RBP12.01□□□□□ -0.49
PTP4A2-207ENST00000494444 KIF12Q96FN5 646 aa12□□□□□ -0.49
PTP4A2-207ENST00000494444 SCUBE2Q9NQ36 999 aa12□□□□□ -0.49
PTP4A2-207ENST00000494444 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
PTP4A2-207ENST00000494444 MAP3K13O43283 966 aa11.97□□□□□ -0.49
PTP4A2-207ENST00000494444 SPOCK2Q92563 424 aa11.97□□□□□ -0.49
PTP4A2-207ENST00000494444 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
PTP4A2-207ENST00000494444 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
PTP4A2-207ENST00000494444 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
PTP4A2-207ENST00000494444 PYGBP11216 843 aa11.91□□□□□ -0.5
PTP4A2-207ENST00000494444 TIE1P35590 1138 aa11.9□□□□□ -0.5
PTP4A2-207ENST00000494444 GSE1Q14687 1217 aa11.89□□□□□ -0.51
PTP4A2-207ENST00000494444 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
PTP4A2-207ENST00000494444 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
PTP4A2-207ENST00000494444 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
PTP4A2-207ENST00000494444 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
PTP4A2-207ENST00000494444 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
PTP4A2-207ENST00000494444 SEC24BO95487 1268 aa11.82□□□□□ -0.52
PTP4A2-207ENST00000494444 SGIP1Q9BQI5 828 aa11.82□□□□□ -0.52
PTP4A2-207ENST00000494444 PCDHB8Q9UN66 801 aa11.79□□□□□ -0.52
PTP4A2-207ENST00000494444 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
PTP4A2-207ENST00000494444 IER5LQ5T953 404 aa11.75□□□□□ -0.53
PTP4A2-207ENST00000494444 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
PTP4A2-207ENST00000494444 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
PTP4A2-207ENST00000494444 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
PTP4A2-207ENST00000494444 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
PTP4A2-207ENST00000494444 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
PTP4A2-207ENST00000494444 ST18O60284 1047 aa11.64□□□□□ -0.55
PTP4A2-207ENST00000494444 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
PTP4A2-207ENST00000494444 PSEN1P49768 467 aa11.61□□□□□ -0.55
PTP4A2-207ENST00000494444 PLCG2P16885 1265 aa11.6□□□□□ -0.55
PTP4A2-207ENST00000494444 PKD2Q13563 968 aa11.58□□□□□ -0.56
PTP4A2-207ENST00000494444 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
PTP4A2-207ENST00000494444 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
PTP4A2-207ENST00000494444 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
PTP4A2-207ENST00000494444 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
PTP4A2-207ENST00000494444 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
PTP4A2-207ENST00000494444 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
PTP4A2-207ENST00000494444 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
PTP4A2-207ENST00000494444 TMEM121BQ9BXQ6 578 aaPredicted RBP11.48□□□□□ -0.57
PTP4A2-207ENST00000494444 CABP2Q9NPB3 220 aa11.48□□□□□ -0.57
PTP4A2-207ENST00000494444 RGL2O15211 777 aa11.46□□□□□ -0.57
PTP4A2-207ENST00000494444 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
PTP4A2-207ENST00000494444 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
PTP4A2-207ENST00000494444 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.45□□□□□ -0.58
PTP4A2-207ENST00000494444 SNPHO15079 494 aa11.45□□□□□ -0.58
PTP4A2-207ENST00000494444 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
PTP4A2-207ENST00000494444 SPNS2Q8IVW8 549 aa11.45□□□□□ -0.58
PTP4A2-207ENST00000494444 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
PTP4A2-207ENST00000494444 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.44□□□□□ -0.58
PTP4A2-207ENST00000494444 MARVELD3Q96A59 401 aa11.41□□□□□ -0.58
PTP4A2-207ENST00000494444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTP4A2-207ENST00000494444 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
PTP4A2-207ENST00000494444 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
PTP4A2-207ENST00000494444 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
PTP4A2-207ENST00000494444 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
PTP4A2-207ENST00000494444 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
PTP4A2-207ENST00000494444 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
PTP4A2-207ENST00000494444 STK25O00506 426 aa11.33□□□□□ -0.6
PTP4A2-207ENST00000494444 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
PTP4A2-207ENST00000494444 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
PTP4A2-207ENST00000494444 EMP3P54852 163 aa11.29□□□□□ -0.6
PTP4A2-207ENST00000494444 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
PTP4A2-207ENST00000494444 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
PTP4A2-207ENST00000494444 SOX12O15370 315 aa11.26□□□□□ -0.61
PTP4A2-207ENST00000494444 POTEB3A0JP26 581 aa11.23□□□□□ -0.61
PTP4A2-207ENST00000494444 POTEBQ6S5H4 581 aa11.23□□□□□ -0.61
PTP4A2-207ENST00000494444 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
PTP4A2-207ENST00000494444 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
PTP4A2-207ENST00000494444 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
PTP4A2-207ENST00000494444 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
PTP4A2-207ENST00000494444 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
PTP4A2-207ENST00000494444 CHGAP10645 457 aaKnown RBP11.2□□□□□ -0.62
PTP4A2-207ENST00000494444 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
PTP4A2-207ENST00000494444 MFRPQ9BY79 579 aa11.19□□□□□ -0.62
PTP4A2-207ENST00000494444 NLRP6P59044 892 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms