RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PAK3O75914 559 aaPredicted RBP6.48□□□□□ -1.37
CDC42EP3-205ENST00000494083 MS4A3Q96HJ5 214 aa6.48□□□□□ -1.37
CDC42EP3-205ENST00000494083 KLHL34Q8N239 644 aa6.47□□□□□ -1.37
CDC42EP3-205ENST00000494083 TRPC6Q9Y210 931 aa6.47□□□□□ -1.37
CDC42EP3-205ENST00000494083 MAP3K13O43283 966 aa6.45□□□□□ -1.38
CDC42EP3-205ENST00000494083 KIF12Q96FN5 646 aa6.44□□□□□ -1.38
CDC42EP3-205ENST00000494083 ZBTB47Q9UFB7 747 aaPredicted RBP6.44□□□□□ -1.38
CDC42EP3-205ENST00000494083 PYGBP11216 843 aa6.43□□□□□ -1.38
CDC42EP3-205ENST00000494083 FAM212AQ96EL1 285 aa6.42□□□□□ -1.38
CDC42EP3-205ENST00000494083 DCAF8Q5TAQ9 597 aa6.4□□□□□ -1.38
CDC42EP3-205ENST00000494083 PELP1Q8IZL8 1130 aaKnown RBP6.4□□□□□ -1.38
CDC42EP3-205ENST00000494083 DCBLD2Q96PD2 775 aa6.4□□□□□ -1.38
CDC42EP3-205ENST00000494083 IFNL1Q8IU54 200 aa6.39□□□□□ -1.39
CDC42EP3-205ENST00000494083 PCDHB13Q9Y5F0 798 aa6.38□□□□□ -1.39
CDC42EP3-205ENST00000494083 SPOCK2Q92563 424 aa6.36□□□□□ -1.39
CDC42EP3-205ENST00000494083 PCDHB8Q9UN66 801 aa6.36□□□□□ -1.39
CDC42EP3-205ENST00000494083 BMP2KQ9NSY1 1161 aaPredicted RBP6.36□□□□□ -1.39
CDC42EP3-205ENST00000494083 CIZ1Q9ULV3 898 aaPredicted RBP6.36□□□□□ -1.39
CDC42EP3-205ENST00000494083 ATN1P54259 1190 aaPredicted RBP6.35□□□□□ -1.39
CDC42EP3-205ENST00000494083 ATMINO43313 823 aaPredicted RBP6.34□□□□□ -1.4
CDC42EP3-205ENST00000494083 ASTLQ6HA08 431 aaPredicted RBP6.33□□□□□ -1.4
CDC42EP3-205ENST00000494083 POTEB2H3BUK9 544 aa6.33□□□□□ -1.4
CDC42EP3-205ENST00000494083 CLCN6P51797 869 aa6.33□□□□□ -1.4
CDC42EP3-205ENST00000494083 TTLL13PA6NNM8 815 aa6.32□□□□□ -1.4
CDC42EP3-205ENST00000494083 RNF25Q96BH1 459 aaPredicted RBP6.29□□□□□ -1.4
CDC42EP3-205ENST00000494083 GSE1Q14687 1217 aa6.29□□□□□ -1.4
CDC42EP3-205ENST00000494083 TRIM35Q9UPQ4 493 aa6.29□□□□□ -1.4
CDC42EP3-205ENST00000494083 METRNQ9UJH8 293 aa6.28□□□□□ -1.4
CDC42EP3-205ENST00000494083 POTEFA5A3E0 1075 aa6.28□□□□□ -1.4
CDC42EP3-205ENST00000494083 TMEM106CQ9BVX2 250 aa6.28□□□□□ -1.4
CDC42EP3-205ENST00000494083 LHX8Q68G74 356 aa6.27□□□□□ -1.41
CDC42EP3-205ENST00000494083 TIE1P35590 1138 aa6.27□□□□□ -1.41
CDC42EP3-205ENST00000494083 POTEJP0CG39 1038 aa6.26□□□□□ -1.41
CDC42EP3-205ENST00000494083 COLQQ9Y215 455 aaPredicted RBP6.26□□□□□ -1.41
CDC42EP3-205ENST00000494083 SGIP1Q9BQI5 828 aa6.26□□□□□ -1.41
CDC42EP3-205ENST00000494083 PKD2Q13563 968 aa6.24□□□□□ -1.41
CDC42EP3-205ENST00000494083 CHRM1P11229 460 aaPredicted RBP6.22□□□□□ -1.41
CDC42EP3-205ENST00000494083 ZNF467Q7Z7K2 595 aaPredicted RBP6.22□□□□□ -1.41
CDC42EP3-205ENST00000494083 PSEN1P49768 467 aa6.21□□□□□ -1.42
CDC42EP3-205ENST00000494083 SLC39A7Q92504 469 aa6.21□□□□□ -1.42
CDC42EP3-205ENST00000494083 OTUD5Q96G74 571 aa6.21□□□□□ -1.42
CDC42EP3-205ENST00000494083 C7P10643 843 aa6.2□□□□□ -1.42
CDC42EP3-205ENST00000494083 RGL2O15211 777 aa6.19□□□□□ -1.42
CDC42EP3-205ENST00000494083 CABP2Q9NPB3 220 aa6.18□□□□□ -1.42
CDC42EP3-205ENST00000494083 PDAP1Q13442 181 aaKnown RBP6.17□□□□□ -1.42
CDC42EP3-205ENST00000494083 SEC24BO95487 1268 aa6.17□□□□□ -1.42
CDC42EP3-205ENST00000494083 ECM2O94769 699 aaPredicted RBP6.17□□□□□ -1.42
CDC42EP3-205ENST00000494083 IRX5P78411 483 aaPredicted RBP6.17□□□□□ -1.42
CDC42EP3-205ENST00000494083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.16□□□□□ -1.42
CDC42EP3-205ENST00000494083 ZFP91Q96JP5 570 aaPredicted RBP6.16□□□□□ -1.42
CDC42EP3-205ENST00000494083 RIOK3O14730 519 aaKnown RBP6.15□□□□□ -1.42
CDC42EP3-205ENST00000494083 PDCD7Q8N8D1 485 aaKnown RBP6.15□□□□□ -1.42
CDC42EP3-205ENST00000494083 DPY19L2Q6NUT2 758 aa6.14□□□□□ -1.43
CDC42EP3-205ENST00000494083 IER5LQ5T953 404 aa6.13□□□□□ -1.43
CDC42EP3-205ENST00000494083 EFCAB3Q8N7B9 438 aa6.13□□□□□ -1.43
CDC42EP3-205ENST00000494083 TRIM41Q8WV44 630 aa6.12□□□□□ -1.43
CDC42EP3-205ENST00000494083 PLCG2P16885 1265 aa6.12□□□□□ -1.43
CDC42EP3-205ENST00000494083 GOLGA2Q08379 1002 aa6.12□□□□□ -1.43
CDC42EP3-205ENST00000494083 BCL11BQ9C0K0 894 aaPredicted RBP6.11□□□□□ -1.43
CDC42EP3-205ENST00000494083 MKRN3Q13064 507 aaKnown RBP6.11□□□□□ -1.43
CDC42EP3-205ENST00000494083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDC42EP3-205ENST00000494083 OCEL1Q9H607 264 aa6.1□□□□□ -1.43
CDC42EP3-205ENST00000494083 STK25O00506 426 aa6.09□□□□□ -1.43
CDC42EP3-205ENST00000494083 VGFO15240 615 aaPredicted RBP6.09□□□□□ -1.43
CDC42EP3-205ENST00000494083 STK24Q9Y6E0 443 aa6.08□□□□□ -1.44
CDC42EP3-205ENST00000494083 ILDR1Q86SU0 546 aaPredicted RBP6.07□□□□□ -1.44
CDC42EP3-205ENST00000494083 MS4A4AQ96JQ5 239 aa6.07□□□□□ -1.44
CDC42EP3-205ENST00000494083 PHF8Q9UPP1 1060 aa6.07□□□□□ -1.44
CDC42EP3-205ENST00000494083 SCUBE2Q9NQ36 999 aa6.05□□□□□ -1.44
CDC42EP3-205ENST00000494083 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
CDC42EP3-205ENST00000494083 MFRPQ9BY79 579 aa6.04□□□□□ -1.44
CDC42EP3-205ENST00000494083 SLAIN1Q8ND83 568 aa6.03□□□□□ -1.44
CDC42EP3-205ENST00000494083 RTN4Q9NQC3 1192 aaKnown RBP6.02□□□□□ -1.45
CDC42EP3-205ENST00000494083 CHGAP10645 457 aaKnown RBP6.01□□□□□ -1.45
CDC42EP3-205ENST00000494083 FBXO22Q8NEZ5 403 aa6.01□□□□□ -1.45
CDC42EP3-205ENST00000494083 MAMSTRQ6ZN01 415 aa6□□□□□ -1.45
CDC42EP3-205ENST00000494083 NKX1-1Q15270 411 aaPredicted RBP5.99□□□□□ -1.45
CDC42EP3-205ENST00000494083 TMEM92Q6UXU6 159 aa5.99□□□□□ -1.45
CDC42EP3-205ENST00000494083 BOLA1Q9Y3E2 137 aa5.99□□□□□ -1.45
CDC42EP3-205ENST00000494083 C3orf67Q6ZVT6 689 aa5.99□□□□□ -1.45
CDC42EP3-205ENST00000494083 DCAF8L2P0C7V8 631 aa5.98□□□□□ -1.45
CDC42EP3-205ENST00000494083 MICALL2Q8IY33 904 aa5.98□□□□□ -1.45
CDC42EP3-205ENST00000494083 PPP1R37O75864 691 aa5.98□□□□□ -1.45
CDC42EP3-205ENST00000494083 FAM163AQ96GL9 167 aaPredicted RBP5.97□□□□□ -1.45
CDC42EP3-205ENST00000494083 HS6ST3Q8IZP7 471 aa5.97□□□□□ -1.45
CDC42EP3-205ENST00000494083 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.97□□□□□ -1.45
CDC42EP3-205ENST00000494083 SOX12O15370 315 aa5.96□□□□□ -1.45
CDC42EP3-205ENST00000494083 TMEM121BQ9BXQ6 578 aaPredicted RBP5.95□□□□□ -1.46
CDC42EP3-205ENST00000494083 L3MBTL3Q96JM7 780 aaPredicted RBP5.95□□□□□ -1.46
CDC42EP3-205ENST00000494083 TAOK2Q9UL54 1235 aa5.94□□□□□ -1.46
CDC42EP3-205ENST00000494083 POTEMA6NI47 508 aa5.94□□□□□ -1.46
CDC42EP3-205ENST00000494083 NLRP6P59044 892 aa5.94□□□□□ -1.46
CDC42EP3-205ENST00000494083 ST18O60284 1047 aa5.93□□□□□ -1.46
CDC42EP3-205ENST00000494083 POTEGQ6S5H5 508 aa5.93□□□□□ -1.46
CDC42EP3-205ENST00000494083 MARVELD3Q96A59 401 aa5.92□□□□□ -1.46
CDC42EP3-205ENST00000494083 G3V3G9 751 aa5.91□□□□□ -1.46
CDC42EP3-205ENST00000494083 HOXB3P14651 431 aaPredicted RBP5.89□□□□□ -1.47
CDC42EP3-205ENST00000494083 AMER1Q5JTC6 1135 aaPredicted RBP5.87□□□□□ -1.47
CDC42EP3-205ENST00000494083 C2orf72A6NCS6 295 aa5.87□□□□□ -1.47
CDC42EP3-205ENST00000494083 GTPBP6O43824 516 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms