RNA–Protein interactions for RNA: ENST00000493835.5

ZEB1-207, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 683 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-207ENST00000493835 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
ZEB1-207ENST00000493835 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
ZEB1-207ENST00000493835 PELP1Q8IZL8 1130 aaKnown RBP12.7□□□□□ -0.38
ZEB1-207ENST00000493835 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
ZEB1-207ENST00000493835 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
ZEB1-207ENST00000493835 POTEB2H3BUK9 544 aa12.65□□□□□ -0.38
ZEB1-207ENST00000493835 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
ZEB1-207ENST00000493835 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
ZEB1-207ENST00000493835 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
ZEB1-207ENST00000493835 VASPP50552 380 aaPredicted RBP12.61□□□□□ -0.39
ZEB1-207ENST00000493835 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
ZEB1-207ENST00000493835 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
ZEB1-207ENST00000493835 MAP3K13O43283 966 aa12.55□□□□□ -0.4
ZEB1-207ENST00000493835 C7P10643 843 aa12.55□□□□□ -0.4
ZEB1-207ENST00000493835 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
ZEB1-207ENST00000493835 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
ZEB1-207ENST00000493835 NUBP1P53384 320 aa12.54□□□□□ -0.4
ZEB1-207ENST00000493835 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-207ENST00000493835 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
ZEB1-207ENST00000493835 ATN1P54259 1190 aaPredicted RBP12.52□□□□□ -0.41
ZEB1-207ENST00000493835 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
ZEB1-207ENST00000493835 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
ZEB1-207ENST00000493835 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
ZEB1-207ENST00000493835 TIE1P35590 1138 aa12.47□□□□□ -0.41
ZEB1-207ENST00000493835 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
ZEB1-207ENST00000493835 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
ZEB1-207ENST00000493835 TTLL13PA6NNM8 815 aa12.41□□□□□ -0.42
ZEB1-207ENST00000493835 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
ZEB1-207ENST00000493835 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
ZEB1-207ENST00000493835 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
ZEB1-207ENST00000493835 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
ZEB1-207ENST00000493835 PKD2Q13563 968 aa12.33□□□□□ -0.44
ZEB1-207ENST00000493835 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
ZEB1-207ENST00000493835 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
ZEB1-207ENST00000493835 IER5LQ5T953 404 aa12.3□□□□□ -0.44
ZEB1-207ENST00000493835 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
ZEB1-207ENST00000493835 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
ZEB1-207ENST00000493835 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
ZEB1-207ENST00000493835 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
ZEB1-207ENST00000493835 TMEM106CQ9BVX2 250 aa12.25□□□□□ -0.45
ZEB1-207ENST00000493835 SEC24BO95487 1268 aa12.24□□□□□ -0.45
ZEB1-207ENST00000493835 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
ZEB1-207ENST00000493835 POTEMA6NI47 508 aa12.23□□□□□ -0.45
ZEB1-207ENST00000493835 PYGBP11216 843 aa12.23□□□□□ -0.45
ZEB1-207ENST00000493835 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
ZEB1-207ENST00000493835 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
ZEB1-207ENST00000493835 LCE2DQ5TA82 110 aaPredicted RBP12.19□□□□□ -0.46
ZEB1-207ENST00000493835 IRX5P78411 483 aaPredicted RBP12.16□□□□□ -0.46
ZEB1-207ENST00000493835 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
ZEB1-207ENST00000493835 GSE1Q14687 1217 aa12.15□□□□□ -0.46
ZEB1-207ENST00000493835 ECM2O94769 699 aaPredicted RBP12.12□□□□□ -0.47
ZEB1-207ENST00000493835 CHRM1P11229 460 aaPredicted RBP12.12□□□□□ -0.47
ZEB1-207ENST00000493835 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
ZEB1-207ENST00000493835 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
ZEB1-207ENST00000493835 PLCG2P16885 1265 aa12.1□□□□□ -0.47
ZEB1-207ENST00000493835 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
ZEB1-207ENST00000493835 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
ZEB1-207ENST00000493835 OCEL1Q9H607 264 aa12.07□□□□□ -0.48
ZEB1-207ENST00000493835 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
ZEB1-207ENST00000493835 RGL2O15211 777 aa12.02□□□□□ -0.49
ZEB1-207ENST00000493835 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
ZEB1-207ENST00000493835 PDCD7Q8N8D1 485 aaKnown RBP11.98□□□□□ -0.49
ZEB1-207ENST00000493835 BBXQ8WY36 941 aaPredicted RBP11.97□□□□□ -0.49
ZEB1-207ENST00000493835 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
ZEB1-207ENST00000493835 PSEN1P49768 467 aa11.96□□□□□ -0.49
ZEB1-207ENST00000493835 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
ZEB1-207ENST00000493835 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
ZEB1-207ENST00000493835 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.92□□□□□ -0.5
ZEB1-207ENST00000493835 ST18O60284 1047 aa11.91□□□□□ -0.5
ZEB1-207ENST00000493835 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
ZEB1-207ENST00000493835 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
ZEB1-207ENST00000493835 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
ZEB1-207ENST00000493835 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
ZEB1-207ENST00000493835 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
ZEB1-207ENST00000493835 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
ZEB1-207ENST00000493835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.511e-11■■■■■ 28.4
ZEB1-207ENST00000493835 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
ZEB1-207ENST00000493835 CHGAP10645 457 aaKnown RBP11.83□□□□□ -0.52
ZEB1-207ENST00000493835 KDM2AQ9Y2K7 1162 aa11.83□□□□□ -0.52
ZEB1-207ENST00000493835 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
ZEB1-207ENST00000493835 SNPHO15079 494 aa11.81□□□□□ -0.52
ZEB1-207ENST00000493835 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
ZEB1-207ENST00000493835 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
ZEB1-207ENST00000493835 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
ZEB1-207ENST00000493835 C3orf67Q6ZVT6 689 aa11.79□□□□□ -0.52
ZEB1-207ENST00000493835 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
ZEB1-207ENST00000493835 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
ZEB1-207ENST00000493835 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
ZEB1-207ENST00000493835 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
ZEB1-207ENST00000493835 BCANQ96GW7 911 aa11.74□□□□□ -0.53
ZEB1-207ENST00000493835 BOLA1Q9Y3E2 137 aa11.71□□□□□ -0.53
ZEB1-207ENST00000493835 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
ZEB1-207ENST00000493835 EFCAB3Q8N7B9 438 aa11.68□□□□□ -0.54
ZEB1-207ENST00000493835 MARVELD3Q96A59 401 aa11.68□□□□□ -0.54
ZEB1-207ENST00000493835 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
ZEB1-207ENST00000493835 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
ZEB1-207ENST00000493835 G3V3G9 751 aa11.62□□□□□ -0.55
ZEB1-207ENST00000493835 HOXB3P14651 431 aaPredicted RBP11.61□□□□□ -0.55
ZEB1-207ENST00000493835 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
ZEB1-207ENST00000493835 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms