RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
SMG7-208ENST00000493609 PHF12Q96QT6 1004 aa15.53■□□□□ 0.08
SMG7-208ENST00000493609 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
SMG7-208ENST00000493609 DCBLD2Q96PD2 775 aa15.5■□□□□ 0.07
SMG7-208ENST00000493609 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
SMG7-208ENST00000493609 PKD2Q13563 968 aa15.45■□□□□ 0.06
SMG7-208ENST00000493609 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
SMG7-208ENST00000493609 PLSCR2Q9NRY7 297 aa15.39■□□□□ 0.05
SMG7-208ENST00000493609 CIZ1Q9ULV3 898 aaPredicted RBP15.32■□□□□ 0.04
SMG7-208ENST00000493609 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
SMG7-208ENST00000493609 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
SMG7-208ENST00000493609 NUBP1P53384 320 aa15.3■□□□□ 0.04
SMG7-208ENST00000493609 ECM2O94769 699 aaPredicted RBP15.29■□□□□ 0.04
SMG7-208ENST00000493609 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
SMG7-208ENST00000493609 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
SMG7-208ENST00000493609 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
SMG7-208ENST00000493609 KIF12Q96FN5 646 aa15.22■□□□□ 0.03
SMG7-208ENST00000493609 DCAF8Q5TAQ9 597 aa15.19■□□□□ 0.02
SMG7-208ENST00000493609 GSE1Q14687 1217 aa15.17■□□□□ 0.02
SMG7-208ENST00000493609 ASTLQ6HA08 431 aaPredicted RBP15.17■□□□□ 0.02
SMG7-208ENST00000493609 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
SMG7-208ENST00000493609 RGL2O15211 777 aa15.15■□□□□ 0.02
SMG7-208ENST00000493609 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
SMG7-208ENST00000493609 MAP3K13O43283 966 aa15.14■□□□□ 0.01
SMG7-208ENST00000493609 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
SMG7-208ENST00000493609 TRPC6Q9Y210 931 aa15.11■□□□□ 0.01
SMG7-208ENST00000493609 TRIM41Q8WV44 630 aa15.08■□□□□ 0
SMG7-208ENST00000493609 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
SMG7-208ENST00000493609 METRNQ9UJH8 293 aa15.06■□□□□ 0
SMG7-208ENST00000493609 SLC39A7Q92504 469 aa15.04■□□□□ -0
SMG7-208ENST00000493609 OTUD5Q96G74 571 aa15.04■□□□□ -0
SMG7-208ENST00000493609 BMP2KQ9NSY1 1161 aaPredicted RBP15.03■□□□□ -0
SMG7-208ENST00000493609 C7P10643 843 aa15.02■□□□□ -0
SMG7-208ENST00000493609 RNF25Q96BH1 459 aaPredicted RBP14.99□□□□□ -0.01
SMG7-208ENST00000493609 TIE1P35590 1138 aa14.98□□□□□ -0.01
SMG7-208ENST00000493609 PYGBP11216 843 aa14.97□□□□□ -0.01
SMG7-208ENST00000493609 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
SMG7-208ENST00000493609 SLC24A1O60721 1099 aa14.96□□□□□ -0.01
SMG7-208ENST00000493609 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
SMG7-208ENST00000493609 POTEJP0CG39 1038 aa14.94□□□□□ -0.02
SMG7-208ENST00000493609 CHRM1P11229 460 aaPredicted RBP14.93□□□□□ -0.02
SMG7-208ENST00000493609 TTLL13PA6NNM8 815 aa14.92□□□□□ -0.02
SMG7-208ENST00000493609 IFNL1Q8IU54 200 aa14.91□□□□□ -0.02
SMG7-208ENST00000493609 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
SMG7-208ENST00000493609 RIOK3O14730 519 aaKnown RBP14.89□□□□□ -0.03
SMG7-208ENST00000493609 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
SMG7-208ENST00000493609 PLCB2Q00722 1185 aa14.83□□□□□ -0.04
SMG7-208ENST00000493609 TRIM35Q9UPQ4 493 aa14.83□□□□□ -0.04
SMG7-208ENST00000493609 BBXQ8WY36 941 aaPredicted RBP14.82□□□□□ -0.04
SMG7-208ENST00000493609 POTEMA6NI47 508 aa14.81□□□□□ -0.04
SMG7-208ENST00000493609 COLQQ9Y215 455 aaPredicted RBP14.81□□□□□ -0.04
SMG7-208ENST00000493609 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
SMG7-208ENST00000493609 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
SMG7-208ENST00000493609 HS6ST3Q8IZP7 471 aa14.77□□□□□ -0.05
SMG7-208ENST00000493609 TAOK2Q9UL54 1235 aa14.77□□□□□ -0.05
SMG7-208ENST00000493609 MAMSTRQ6ZN01 415 aa14.76□□□□□ -0.05
SMG7-208ENST00000493609 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
SMG7-208ENST00000493609 SEC24BO95487 1268 aa14.75□□□□□ -0.05
SMG7-208ENST00000493609 PCDHB8Q9UN66 801 aa14.74□□□□□ -0.05
SMG7-208ENST00000493609 IER5LQ5T953 404 aa14.73□□□□□ -0.05
SMG7-208ENST00000493609 POTEGQ6S5H5 508 aa14.73□□□□□ -0.05
SMG7-208ENST00000493609 STK25O00506 426 aa14.72□□□□□ -0.05
SMG7-208ENST00000493609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.71□□□□□ -0.05
SMG7-208ENST00000493609 ZFP91Q96JP5 570 aaPredicted RBP14.71□□□□□ -0.05
SMG7-208ENST00000493609 SCUBE2Q9NQ36 999 aa14.71□□□□□ -0.05
SMG7-208ENST00000493609 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
SMG7-208ENST00000493609 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
SMG7-208ENST00000493609 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
SMG7-208ENST00000493609 BCL11BQ9C0K0 894 aaPredicted RBP14.66□□□□□ -0.06
SMG7-208ENST00000493609 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
SMG7-208ENST00000493609 PCDH10Q9P2E7 1040 aa14.65□□□□□ -0.06
SMG7-208ENST00000493609 STK24Q9Y6E0 443 aa14.65□□□□□ -0.06
SMG7-208ENST00000493609 PDAP1Q13442 181 aaKnown RBP14.62□□□□□ -0.07
SMG7-208ENST00000493609 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
SMG7-208ENST00000493609 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
SMG7-208ENST00000493609 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
SMG7-208ENST00000493609 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
SMG7-208ENST00000493609 PLCG2P16885 1265 aa14.58□□□□□ -0.08
SMG7-208ENST00000493609 PSEN1P49768 467 aa14.58□□□□□ -0.08
SMG7-208ENST00000493609 FAM163AQ96GL9 167 aaPredicted RBP14.54□□□□□ -0.08
SMG7-208ENST00000493609 LCE2DQ5TA82 110 aaPredicted RBP14.53□□□□□ -0.08
SMG7-208ENST00000493609 OCEL1Q9H607 264 aa14.53□□□□□ -0.08
SMG7-208ENST00000493609 GTPBP6O43824 516 aaPredicted RBP14.48□□□□□ -0.09
SMG7-208ENST00000493609 SLAIN1Q8ND83 568 aa14.45□□□□□ -0.1
SMG7-208ENST00000493609 TSHZ2Q9NRE2 1034 aa14.45□□□□□ -0.1
SMG7-208ENST00000493609 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
SMG7-208ENST00000493609 MKRN3Q13064 507 aaKnown RBP14.41□□□□□ -0.1
SMG7-208ENST00000493609 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
SMG7-208ENST00000493609 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
SMG7-208ENST00000493609 EFCAB3Q8N7B9 438 aa14.38□□□□□ -0.11
SMG7-208ENST00000493609 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
SMG7-208ENST00000493609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMG7-208ENST00000493609 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
SMG7-208ENST00000493609 MFRPQ9BY79 579 aa14.34□□□□□ -0.11
SMG7-208ENST00000493609 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
SMG7-208ENST00000493609 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.31□□□□□ -0.12
SMG7-208ENST00000493609 ST18O60284 1047 aa14.28□□□□□ -0.12
SMG7-208ENST00000493609 PHF8Q9UPP1 1060 aa14.28□□□□□ -0.12
SMG7-208ENST00000493609 SOX12O15370 315 aa14.27□□□□□ -0.13
SMG7-208ENST00000493609 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms