RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 TSPYL2Q9H2G4 693 aaPredicted RBP11.96□□□□□ -0.49
CCNB3-208ENST00000493507 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
CCNB3-208ENST00000493507 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
CCNB3-208ENST00000493507 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
CCNB3-208ENST00000493507 PYGBP11216 843 aa11.85□□□□□ -0.51
CCNB3-208ENST00000493507 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
CCNB3-208ENST00000493507 CCDC61Q9Y6R9 512 aa11.85□□□□□ -0.51
CCNB3-208ENST00000493507 RGL2O15211 777 aa11.83□□□□□ -0.52
CCNB3-208ENST00000493507 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
CCNB3-208ENST00000493507 POTEHQ6S545 545 aa11.83□□□□□ -0.52
CCNB3-208ENST00000493507 HAX1O00165 279 aa11.82□□□□□ -0.52
CCNB3-208ENST00000493507 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
CCNB3-208ENST00000493507 RIOK3O14730 519 aaKnown RBP11.78□□□□□ -0.52
CCNB3-208ENST00000493507 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
CCNB3-208ENST00000493507 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
CCNB3-208ENST00000493507 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
CCNB3-208ENST00000493507 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
CCNB3-208ENST00000493507 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
CCNB3-208ENST00000493507 PHF12Q96QT6 1004 aa11.72□□□□□ -0.53
CCNB3-208ENST00000493507 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.53
CCNB3-208ENST00000493507 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
CCNB3-208ENST00000493507 MAP3K13O43283 966 aa11.7□□□□□ -0.54
CCNB3-208ENST00000493507 CLCN6P51797 869 aa11.68□□□□□ -0.54
CCNB3-208ENST00000493507 EVX2Q03828 476 aa11.66□□□□□ -0.54
CCNB3-208ENST00000493507 PCDHB8Q9UN66 801 aa11.66□□□□□ -0.54
CCNB3-208ENST00000493507 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.54
CCNB3-208ENST00000493507 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
CCNB3-208ENST00000493507 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
CCNB3-208ENST00000493507 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
CCNB3-208ENST00000493507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.6□□□□□ -0.55
CCNB3-208ENST00000493507 STK25O00506 426 aa11.6□□□□□ -0.55
CCNB3-208ENST00000493507 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
CCNB3-208ENST00000493507 PSEN1P49768 467 aa11.59□□□□□ -0.55
CCNB3-208ENST00000493507 BBXQ8WY36 941 aaPredicted RBP11.59□□□□□ -0.55
CCNB3-208ENST00000493507 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
CCNB3-208ENST00000493507 BCL11BQ9C0K0 894 aaPredicted RBP11.56□□□□□ -0.56
CCNB3-208ENST00000493507 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
CCNB3-208ENST00000493507 STK24Q9Y6E0 443 aa11.55□□□□□ -0.56
CCNB3-208ENST00000493507 DNAJC5Q9H3Z4 198 aa11.53□□□□□ -0.56
CCNB3-208ENST00000493507 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
CCNB3-208ENST00000493507 GABBR2O75899 941 aa11.49□□□□□ -0.57
CCNB3-208ENST00000493507 TIE1P35590 1138 aa11.49□□□□□ -0.57
CCNB3-208ENST00000493507 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
CCNB3-208ENST00000493507 TRPC6Q9Y210 931 aa11.47□□□□□ -0.57
CCNB3-208ENST00000493507 SP7Q8TDD2 431 aaPredicted RBP11.46□□□□□ -0.57
CCNB3-208ENST00000493507 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
CCNB3-208ENST00000493507 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
CCNB3-208ENST00000493507 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
CCNB3-208ENST00000493507 SPRYD3Q8NCJ5 442 aa11.43□□□□□ -0.58
CCNB3-208ENST00000493507 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
CCNB3-208ENST00000493507 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
CCNB3-208ENST00000493507 RYDENQ9NUL5 291 aaKnown RBP11.42□□□□□ -0.58
CCNB3-208ENST00000493507 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
CCNB3-208ENST00000493507 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
CCNB3-208ENST00000493507 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
CCNB3-208ENST00000493507 SOX12O15370 315 aa11.38□□□□□ -0.59
CCNB3-208ENST00000493507 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
CCNB3-208ENST00000493507 CFAP44Q96MT7 982 aa11.38□□□□□ -0.59
CCNB3-208ENST00000493507 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
CCNB3-208ENST00000493507 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
CCNB3-208ENST00000493507 ATMINO43313 823 aaPredicted RBP11.36□□□□□ -0.59
CCNB3-208ENST00000493507 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
CCNB3-208ENST00000493507 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
CCNB3-208ENST00000493507 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
CCNB3-208ENST00000493507 NLRP6P59044 892 aa11.33□□□□□ -0.6
CCNB3-208ENST00000493507 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
CCNB3-208ENST00000493507 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
CCNB3-208ENST00000493507 IER5LQ5T953 404 aa11.28□□□□□ -0.6
CCNB3-208ENST00000493507 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
CCNB3-208ENST00000493507 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
CCNB3-208ENST00000493507 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
CCNB3-208ENST00000493507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
CCNB3-208ENST00000493507 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
CCNB3-208ENST00000493507 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
CCNB3-208ENST00000493507 POTEIP0CG38 1075 aa11.21□□□□□ -0.61
CCNB3-208ENST00000493507 C7P10643 843 aa11.21□□□□□ -0.61
CCNB3-208ENST00000493507 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
CCNB3-208ENST00000493507 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
CCNB3-208ENST00000493507 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
CCNB3-208ENST00000493507 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
CCNB3-208ENST00000493507 PLCG2P16885 1265 aa11.18□□□□□ -0.62
CCNB3-208ENST00000493507 SEC24BO95487 1268 aa11.17□□□□□ -0.62
CCNB3-208ENST00000493507 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
CCNB3-208ENST00000493507 PPP1R37O75864 691 aa11.15□□□□□ -0.62
CCNB3-208ENST00000493507 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
CCNB3-208ENST00000493507 METRNQ9UJH8 293 aa11.15□□□□□ -0.62
CCNB3-208ENST00000493507 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
CCNB3-208ENST00000493507 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
CCNB3-208ENST00000493507 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
CCNB3-208ENST00000493507 G3V3G9 751 aa11.09□□□□□ -0.63
CCNB3-208ENST00000493507 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
CCNB3-208ENST00000493507 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
CCNB3-208ENST00000493507 POTEFA5A3E0 1075 aa11.05□□□□□ -0.64
CCNB3-208ENST00000493507 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
CCNB3-208ENST00000493507 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
CCNB3-208ENST00000493507 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
CCNB3-208ENST00000493507 KDM2AQ9Y2K7 1162 aa11.01□□□□□ -0.65
CCNB3-208ENST00000493507 PDE4AP27815 886 aa10.98□□□□□ -0.65
CCNB3-208ENST00000493507 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
CCNB3-208ENST00000493507 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms