RNA–Protein interactions for RNA: ENST00000493409.5

CCSER2-206, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 5

Gene CCSER2, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-206ENST00000493409 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
CCSER2-206ENST00000493409 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
CCSER2-206ENST00000493409 PLSCR2Q9NRY7 297 aa16.74■□□□□ 0.27
CCSER2-206ENST00000493409 C7P10643 843 aa16.73■□□□□ 0.27
CCSER2-206ENST00000493409 SLC39A7Q92504 469 aa16.73■□□□□ 0.27
CCSER2-206ENST00000493409 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
CCSER2-206ENST00000493409 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
CCSER2-206ENST00000493409 POTEMA6NI47 508 aa16.64■□□□□ 0.25
CCSER2-206ENST00000493409 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
CCSER2-206ENST00000493409 POTEGQ6S5H5 508 aa16.59■□□□□ 0.25
CCSER2-206ENST00000493409 TRPC6Q9Y210 931 aa16.58■□□□□ 0.24
CCSER2-206ENST00000493409 RASEFQ8IZ41 740 aa16.57■□□□□ 0.24
CCSER2-206ENST00000493409 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
CCSER2-206ENST00000493409 MAMSTRQ6ZN01 415 aa16.56■□□□□ 0.24
CCSER2-206ENST00000493409 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CCSER2-206ENST00000493409 MAP3K13O43283 966 aa16.54■□□□□ 0.24
CCSER2-206ENST00000493409 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
CCSER2-206ENST00000493409 PLEKHG5O94827 1062 aa16.51■□□□□ 0.23
CCSER2-206ENST00000493409 TIE1P35590 1138 aa16.49■□□□□ 0.23
CCSER2-206ENST00000493409 LCE2DQ5TA82 110 aaPredicted RBP16.47■□□□□ 0.23
CCSER2-206ENST00000493409 SCUBE2Q9NQ36 999 aa16.44■□□□□ 0.22
CCSER2-206ENST00000493409 TTLL13PA6NNM8 815 aa16.41■□□□□ 0.22
CCSER2-206ENST00000493409 PCDH10Q9P2E7 1040 aa16.38■□□□□ 0.21
CCSER2-206ENST00000493409 PLCD3Q8N3E9 789 aa16.37■□□□□ 0.21
CCSER2-206ENST00000493409 COLQQ9Y215 455 aaPredicted RBP16.37■□□□□ 0.21
CCSER2-206ENST00000493409 NUBP1P53384 320 aa16.35■□□□□ 0.21
CCSER2-206ENST00000493409 SGIP1Q9BQI5 828 aa16.35■□□□□ 0.21
CCSER2-206ENST00000493409 FAM163AQ96GL9 167 aaPredicted RBP16.32■□□□□ 0.2
CCSER2-206ENST00000493409 PCDHB13Q9Y5F0 798 aa16.3■□□□□ 0.2
CCSER2-206ENST00000493409 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
CCSER2-206ENST00000493409 SEC24BO95487 1268 aa16.27■□□□□ 0.2
CCSER2-206ENST00000493409 IER5LQ5T953 404 aa16.27■□□□□ 0.2
CCSER2-206ENST00000493409 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
CCSER2-206ENST00000493409 IFNL1Q8IU54 200 aa16.24■□□□□ 0.19
CCSER2-206ENST00000493409 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
CCSER2-206ENST00000493409 TMEM106CQ9BVX2 250 aa16.14■□□□□ 0.17
CCSER2-206ENST00000493409 FKBP8Q14318 412 aa16.11■□□□□ 0.17
CCSER2-206ENST00000493409 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
CCSER2-206ENST00000493409 SLAIN1Q8ND83 568 aa16.04■□□□□ 0.16
CCSER2-206ENST00000493409 PLCG2P16885 1265 aa16.03■□□□□ 0.16
CCSER2-206ENST00000493409 ST18O60284 1047 aa15.98■□□□□ 0.15
CCSER2-206ENST00000493409 PYGBP11216 843 aa15.98■□□□□ 0.15
CCSER2-206ENST00000493409 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
CCSER2-206ENST00000493409 DCAF8Q5TAQ9 597 aa15.96■□□□□ 0.15
CCSER2-206ENST00000493409 OCEL1Q9H607 264 aa15.94■□□□□ 0.14
CCSER2-206ENST00000493409 PCDHB8Q9UN66 801 aa15.92■□□□□ 0.14
CCSER2-206ENST00000493409 FBXO3Q9UK99 471 aa15.87■□□□□ 0.13
CCSER2-206ENST00000493409 PDCD7Q8N8D1 485 aaKnown RBP15.79■□□□□ 0.12
CCSER2-206ENST00000493409 TMEM121BQ9BXQ6 578 aaPredicted RBP15.79■□□□□ 0.12
CCSER2-206ENST00000493409 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.78■□□□□ 0.12
CCSER2-206ENST00000493409 GSE1Q14687 1217 aa15.74■□□□□ 0.11
CCSER2-206ENST00000493409 ZNF467Q7Z7K2 595 aaPredicted RBP15.74■□□□□ 0.11
CCSER2-206ENST00000493409 SNPHO15079 494 aa15.73■□□□□ 0.11
CCSER2-206ENST00000493409 VASPP50552 380 aaPredicted RBP15.73■□□□□ 0.11
CCSER2-206ENST00000493409 CHRM1P11229 460 aaPredicted RBP15.71■□□□□ 0.11
CCSER2-206ENST00000493409 KLHL34Q8N239 644 aa15.69■□□□□ 0.1
CCSER2-206ENST00000493409 MARVELD3Q96A59 401 aa15.66■□□□□ 0.1
CCSER2-206ENST00000493409 MKRN3Q13064 507 aaKnown RBP15.65■□□□□ 0.1
CCSER2-206ENST00000493409 PSEN1P49768 467 aa15.62■□□□□ 0.09
CCSER2-206ENST00000493409 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
CCSER2-206ENST00000493409 C3orf67Q6ZVT6 689 aa15.62■□□□□ 0.09
CCSER2-206ENST00000493409 SPNS2Q8IVW8 549 aa15.62■□□□□ 0.09
CCSER2-206ENST00000493409 L3MBTL3Q96JM7 780 aaPredicted RBP15.62■□□□□ 0.09
CCSER2-206ENST00000493409 MMRN1Q13201 1228 aa15.61■□□□□ 0.09
CCSER2-206ENST00000493409 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
CCSER2-206ENST00000493409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.6■□□□□ 0.094e-10■□□□□ 8.7
CCSER2-206ENST00000493409 PDAP1Q13442 181 aaKnown RBP15.52■□□□□ 0.08
CCSER2-206ENST00000493409 EMP3P54852 163 aa15.5■□□□□ 0.07
CCSER2-206ENST00000493409 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
CCSER2-206ENST00000493409 POTEB3A0JP26 581 aa15.48■□□□□ 0.07
CCSER2-206ENST00000493409 POTEBQ6S5H4 581 aa15.48■□□□□ 0.07
CCSER2-206ENST00000493409 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
CCSER2-206ENST00000493409 SPOCK2Q92563 424 aa15.43■□□□□ 0.06
CCSER2-206ENST00000493409 KRTAP3-3Q9BYR6 98 aa15.43■□□□□ 0.06
CCSER2-206ENST00000493409 KRTAP3-2Q9BYR7 98 aa15.43■□□□□ 0.06
CCSER2-206ENST00000493409 HS3ST6Q96QI5 342 aa15.42■□□□□ 0.06
CCSER2-206ENST00000493409 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
CCSER2-206ENST00000493409 BOLA1Q9Y3E2 137 aa15.39■□□□□ 0.05
CCSER2-206ENST00000493409 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
CCSER2-206ENST00000493409 CIZ1Q9ULV3 898 aaPredicted RBP15.38■□□□□ 0.05
CCSER2-206ENST00000493409 HOXB3P14651 431 aaPredicted RBP15.37■□□□□ 0.05
CCSER2-206ENST00000493409 G3V3G9 751 aa15.28■□□□□ 0.04
CCSER2-206ENST00000493409 HOXB1P14653 301 aaPredicted RBP15.25■□□□□ 0.03
CCSER2-206ENST00000493409 EFCAB3Q8N7B9 438 aa15.22■□□□□ 0.03
CCSER2-206ENST00000493409 DOK7Q18PE1 504 aa15.19■□□□□ 0.02
CCSER2-206ENST00000493409 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
CCSER2-206ENST00000493409 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
CCSER2-206ENST00000493409 TMEM92Q6UXU6 159 aa15.13■□□□□ 0.01
CCSER2-206ENST00000493409 ERBB3P21860 1342 aa15.13■□□□□ 0.01
CCSER2-206ENST00000493409 MICALL2Q8IY33 904 aa15.12■□□□□ 0.01
CCSER2-206ENST00000493409 RIMBP2O15034 1052 aa15.07■□□□□ 0
CCSER2-206ENST00000493409 RNF25Q96BH1 459 aaPredicted RBP15.06■□□□□ 0
CCSER2-206ENST00000493409 MS4A4AQ96JQ5 239 aa15.06■□□□□ 0
CCSER2-206ENST00000493409 VARS2Q5ST30 1063 aaKnown RBP15.05■□□□□ -0
CCSER2-206ENST00000493409 SOX12O15370 315 aa15.04■□□□□ -0
CCSER2-206ENST00000493409 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
CCSER2-206ENST00000493409 RIOK3O14730 519 aaKnown RBP15.02■□□□□ -0
CCSER2-206ENST00000493409 GPR153Q6NV75 609 aa15.01□□□□□ -0.01
CCSER2-206ENST00000493409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.99□□□□□ -0.01
CCSER2-206ENST00000493409 ZFP91Q96JP5 570 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms