RNA–Protein interactions for RNA: ENST00000493238.1

RNF13-216, Transcript of ring finger protein 13, humanhuman

TSL 2

Gene RNF13, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-216ENST00000493238 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
RNF13-216ENST00000493238 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
RNF13-216ENST00000493238 GALR2O43603 387 aaPredicted RBP12.24□□□□□ -0.45
RNF13-216ENST00000493238 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
RNF13-216ENST00000493238 KIF12Q96FN5 646 aa12.22□□□□□ -0.45
RNF13-216ENST00000493238 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
RNF13-216ENST00000493238 DCAF8Q5TAQ9 597 aa12.18□□□□□ -0.46
RNF13-216ENST00000493238 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
RNF13-216ENST00000493238 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
RNF13-216ENST00000493238 MAP3K13O43283 966 aa12.16□□□□□ -0.46
RNF13-216ENST00000493238 DCBLD2Q96PD2 775 aa12.15□□□□□ -0.46
RNF13-216ENST00000493238 GSE1Q14687 1217 aa12.13□□□□□ -0.47
RNF13-216ENST00000493238 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
RNF13-216ENST00000493238 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
RNF13-216ENST00000493238 PYGBP11216 843 aa12.05□□□□□ -0.48
RNF13-216ENST00000493238 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
RNF13-216ENST00000493238 ASTLQ6HA08 431 aaPredicted RBP12.04□□□□□ -0.48
RNF13-216ENST00000493238 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
RNF13-216ENST00000493238 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
RNF13-216ENST00000493238 IFNL1Q8IU54 200 aa12.02□□□□□ -0.49
RNF13-216ENST00000493238 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
RNF13-216ENST00000493238 TIE1P35590 1138 aa12□□□□□ -0.49
RNF13-216ENST00000493238 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
RNF13-216ENST00000493238 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
RNF13-216ENST00000493238 ATN1P54259 1190 aaPredicted RBP11.96□□□□□ -0.49
RNF13-216ENST00000493238 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
RNF13-216ENST00000493238 TTLL13PA6NNM8 815 aa11.93□□□□□ -0.5
RNF13-216ENST00000493238 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
RNF13-216ENST00000493238 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
RNF13-216ENST00000493238 LHX8Q68G74 356 aa11.9□□□□□ -0.5
RNF13-216ENST00000493238 SLC39A7Q92504 469 aa11.9□□□□□ -0.5
RNF13-216ENST00000493238 C7P10643 843 aa11.89□□□□□ -0.51
RNF13-216ENST00000493238 TMEM106CQ9BVX2 250 aa11.87□□□□□ -0.51
RNF13-216ENST00000493238 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
RNF13-216ENST00000493238 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
RNF13-216ENST00000493238 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
RNF13-216ENST00000493238 PSEN1P49768 467 aa11.8□□□□□ -0.52
RNF13-216ENST00000493238 PDAP1Q13442 181 aaKnown RBP11.8□□□□□ -0.52
RNF13-216ENST00000493238 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
RNF13-216ENST00000493238 IER5LQ5T953 404 aa11.79□□□□□ -0.52
RNF13-216ENST00000493238 PKD2Q13563 968 aa11.76□□□□□ -0.53
RNF13-216ENST00000493238 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
RNF13-216ENST00000493238 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
RNF13-216ENST00000493238 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
RNF13-216ENST00000493238 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
RNF13-216ENST00000493238 SEC24BO95487 1268 aa11.7□□□□□ -0.54
RNF13-216ENST00000493238 POTEJP0CG39 1038 aa11.7□□□□□ -0.54
RNF13-216ENST00000493238 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
RNF13-216ENST00000493238 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
RNF13-216ENST00000493238 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
RNF13-216ENST00000493238 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
RNF13-216ENST00000493238 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
RNF13-216ENST00000493238 PLCG2P16885 1265 aa11.64□□□□□ -0.55
RNF13-216ENST00000493238 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
RNF13-216ENST00000493238 OCEL1Q9H607 264 aa11.64□□□□□ -0.55
RNF13-216ENST00000493238 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
RNF13-216ENST00000493238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.62□□□□□ -0.55
RNF13-216ENST00000493238 RGL2O15211 777 aa11.62□□□□□ -0.55
RNF13-216ENST00000493238 MAMSTRQ6ZN01 415 aa11.62□□□□□ -0.55
RNF13-216ENST00000493238 ZFP91Q96JP5 570 aaPredicted RBP11.62□□□□□ -0.55
RNF13-216ENST00000493238 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
RNF13-216ENST00000493238 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
RNF13-216ENST00000493238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNF13-216ENST00000493238 EFCAB3Q8N7B9 438 aa11.56□□□□□ -0.56
RNF13-216ENST00000493238 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
RNF13-216ENST00000493238 SOX12O15370 315 aa11.51□□□□□ -0.57
RNF13-216ENST00000493238 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
RNF13-216ENST00000493238 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
RNF13-216ENST00000493238 STK25O00506 426 aa11.48□□□□□ -0.57
RNF13-216ENST00000493238 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
RNF13-216ENST00000493238 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
RNF13-216ENST00000493238 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
RNF13-216ENST00000493238 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
RNF13-216ENST00000493238 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
RNF13-216ENST00000493238 NLRP6P59044 892 aa11.39□□□□□ -0.59
RNF13-216ENST00000493238 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
RNF13-216ENST00000493238 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
RNF13-216ENST00000493238 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
RNF13-216ENST00000493238 BOLA1Q9Y3E2 137 aa11.39□□□□□ -0.59
RNF13-216ENST00000493238 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
RNF13-216ENST00000493238 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
RNF13-216ENST00000493238 MFRPQ9BY79 579 aa11.38□□□□□ -0.59
RNF13-216ENST00000493238 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
RNF13-216ENST00000493238 G3V3G9 751 aa11.34□□□□□ -0.59
RNF13-216ENST00000493238 CHGAP10645 457 aaKnown RBP11.33□□□□□ -0.6
RNF13-216ENST00000493238 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
RNF13-216ENST00000493238 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
RNF13-216ENST00000493238 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
RNF13-216ENST00000493238 LCE2DQ5TA82 110 aaPredicted RBP11.27□□□□□ -0.61
RNF13-216ENST00000493238 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
RNF13-216ENST00000493238 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
RNF13-216ENST00000493238 RTN4Q9NQC3 1192 aaKnown RBP11.24□□□□□ -0.61
RNF13-216ENST00000493238 SNPHO15079 494 aa11.22□□□□□ -0.61
RNF13-216ENST00000493238 TMEM92Q6UXU6 159 aa11.21□□□□□ -0.61
RNF13-216ENST00000493238 PPP1R37O75864 691 aa11.2□□□□□ -0.62
RNF13-216ENST00000493238 DCAF8L2P0C7V8 631 aa11.19□□□□□ -0.62
RNF13-216ENST00000493238 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
RNF13-216ENST00000493238 ST18O60284 1047 aa11.17□□□□□ -0.62
RNF13-216ENST00000493238 POTEMA6NI47 508 aa11.15□□□□□ -0.62
RNF13-216ENST00000493238 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms