RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 RASEFQ8IZ41 740 aa18.76■□□□□ 0.59
COL12A1-209ENST00000493109 ATMINO43313 823 aaPredicted RBP18.73■□□□□ 0.59
COL12A1-209ENST00000493109 FKBP8Q14318 412 aa18.73■□□□□ 0.59
COL12A1-209ENST00000493109 KIF12Q96FN5 646 aa18.72■□□□□ 0.59
COL12A1-209ENST00000493109 OTUD5Q96G74 571 aa18.7■□□□□ 0.58
COL12A1-209ENST00000493109 TRPC6Q9Y210 931 aa18.66■□□□□ 0.58
COL12A1-209ENST00000493109 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
COL12A1-209ENST00000493109 PLCD3Q8N3E9 789 aa18.64■□□□□ 0.57
COL12A1-209ENST00000493109 MAP3K13O43283 966 aa18.61■□□□□ 0.57
COL12A1-209ENST00000493109 METRNQ9UJH8 293 aa18.61■□□□□ 0.57
COL12A1-209ENST00000493109 ATN1P54259 1190 aaPredicted RBP18.59■□□□□ 0.57
COL12A1-209ENST00000493109 NUBP1P53384 320 aa18.58■□□□□ 0.56
COL12A1-209ENST00000493109 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
COL12A1-209ENST00000493109 SLC39A7Q92504 469 aa18.55■□□□□ 0.56
COL12A1-209ENST00000493109 BMP2KQ9NSY1 1161 aaPredicted RBP18.55■□□□□ 0.56
COL12A1-209ENST00000493109 C7P10643 843 aa18.52■□□□□ 0.56
COL12A1-209ENST00000493109 POTEFA5A3E0 1075 aa18.47■□□□□ 0.55
COL12A1-209ENST00000493109 TIE1P35590 1138 aa18.44■□□□□ 0.54
COL12A1-209ENST00000493109 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
COL12A1-209ENST00000493109 TTLL13PA6NNM8 815 aa18.39■□□□□ 0.53
COL12A1-209ENST00000493109 PCDHB13Q9Y5F0 798 aa18.36■□□□□ 0.53
COL12A1-209ENST00000493109 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
COL12A1-209ENST00000493109 IFNL1Q8IU54 200 aa18.32■□□□□ 0.52
COL12A1-209ENST00000493109 FAM212AQ96EL1 285 aa18.31■□□□□ 0.52
COL12A1-209ENST00000493109 COLQQ9Y215 455 aaPredicted RBP18.29■□□□□ 0.52
COL12A1-209ENST00000493109 TRIM35Q9UPQ4 493 aa18.25■□□□□ 0.51
COL12A1-209ENST00000493109 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
COL12A1-209ENST00000493109 MAMSTRQ6ZN01 415 aa18.22■□□□□ 0.51
COL12A1-209ENST00000493109 LCE2DQ5TA82 110 aaPredicted RBP18.16■□□□□ 0.5
COL12A1-209ENST00000493109 POTEMA6NI47 508 aa18.15■□□□□ 0.5
COL12A1-209ENST00000493109 PYGBP11216 843 aa18.15■□□□□ 0.5
COL12A1-209ENST00000493109 VASPP50552 380 aaPredicted RBP18.15■□□□□ 0.5
COL12A1-209ENST00000493109 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
COL12A1-209ENST00000493109 IER5LQ5T953 404 aa18.14■□□□□ 0.49
COL12A1-209ENST00000493109 TMEM106CQ9BVX2 250 aa18.14■□□□□ 0.49
COL12A1-209ENST00000493109 SCUBE2Q9NQ36 999 aa18.14■□□□□ 0.49
COL12A1-209ENST00000493109 SEC24BO95487 1268 aa18.11■□□□□ 0.49
COL12A1-209ENST00000493109 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
COL12A1-209ENST00000493109 PCDHB8Q9UN66 801 aa18.05■□□□□ 0.48
COL12A1-209ENST00000493109 PLSCR2Q9NRY7 297 aa18.03■□□□□ 0.48
COL12A1-209ENST00000493109 IRX5P78411 483 aaPredicted RBP18■□□□□ 0.47
COL12A1-209ENST00000493109 KLHL34Q8N239 644 aa18■□□□□ 0.47
COL12A1-209ENST00000493109 FAM163AQ96GL9 167 aaPredicted RBP17.96■□□□□ 0.47
COL12A1-209ENST00000493109 PLCG2P16885 1265 aa17.91■□□□□ 0.46
COL12A1-209ENST00000493109 GSE1Q14687 1217 aa17.91■□□□□ 0.46
COL12A1-209ENST00000493109 IFNLR1Q8IU57 520 aaPredicted RBP17.88■□□□□ 0.45
COL12A1-209ENST00000493109 CHRM1P11229 460 aaPredicted RBP17.84■□□□□ 0.45
COL12A1-209ENST00000493109 OCEL1Q9H607 264 aa17.83■□□□□ 0.44
COL12A1-209ENST00000493109 SLAIN1Q8ND83 568 aa17.82■□□□□ 0.44
COL12A1-209ENST00000493109 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
COL12A1-209ENST00000493109 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
COL12A1-209ENST00000493109 SPOCK2Q92563 424 aa17.74■□□□□ 0.43
COL12A1-209ENST00000493109 PCDH10Q9P2E7 1040 aa17.74■□□□□ 0.43
COL12A1-209ENST00000493109 PSEN1P49768 467 aa17.71■□□□□ 0.43
COL12A1-209ENST00000493109 ST18O60284 1047 aa17.68■□□□□ 0.42
COL12A1-209ENST00000493109 CIZ1Q9ULV3 898 aaPredicted RBP17.65■□□□□ 0.42
COL12A1-209ENST00000493109 MKRN3Q13064 507 aaKnown RBP17.61■□□□□ 0.41
COL12A1-209ENST00000493109 PDAP1Q13442 181 aaKnown RBP17.6■□□□□ 0.41
COL12A1-209ENST00000493109 ILDR1Q86SU0 546 aaPredicted RBP17.6■□□□□ 0.41
COL12A1-209ENST00000493109 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.59■□□□□ 0.41
COL12A1-209ENST00000493109 GOLGA2Q08379 1002 aa17.58■□□□□ 0.4
COL12A1-209ENST00000493109 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL12A1-209ENST00000493109 CDAN1Q8IWY9 1227 aa17.53■□□□□ 0.4
COL12A1-209ENST00000493109 DPY19L2Q6NUT2 758 aa17.52■□□□□ 0.4
COL12A1-209ENST00000493109 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
COL12A1-209ENST00000493109 L3MBTL3Q96JM7 780 aaPredicted RBP17.47■□□□□ 0.39
COL12A1-209ENST00000493109 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
COL12A1-209ENST00000493109 TMEM121BQ9BXQ6 578 aaPredicted RBP17.4■□□□□ 0.38
COL12A1-209ENST00000493109 SNPHO15079 494 aa17.39■□□□□ 0.37
COL12A1-209ENST00000493109 MARVELD3Q96A59 401 aa17.38■□□□□ 0.37
COL12A1-209ENST00000493109 RNF25Q96BH1 459 aaPredicted RBP17.36■□□□□ 0.37
COL12A1-209ENST00000493109 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
COL12A1-209ENST00000493109 EFCAB3Q8N7B9 438 aa17.33■□□□□ 0.36
COL12A1-209ENST00000493109 BOLA1Q9Y3E2 137 aa17.32■□□□□ 0.36
COL12A1-209ENST00000493109 POTEB3A0JP26 581 aa17.23■□□□□ 0.35
COL12A1-209ENST00000493109 POTEBQ6S5H4 581 aa17.23■□□□□ 0.35
COL12A1-209ENST00000493109 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
COL12A1-209ENST00000493109 HOXB3P14651 431 aaPredicted RBP17.21■□□□□ 0.35
COL12A1-209ENST00000493109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
COL12A1-209ENST00000493109 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
COL12A1-209ENST00000493109 EMP3P54852 163 aa17.18■□□□□ 0.34
COL12A1-209ENST00000493109 MS4A4AQ96JQ5 239 aa17.16■□□□□ 0.34
COL12A1-209ENST00000493109 G3V3G9 751 aa17.15■□□□□ 0.34
COL12A1-209ENST00000493109 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
COL12A1-209ENST00000493109 TMEM92Q6UXU6 159 aa17.13■□□□□ 0.33
COL12A1-209ENST00000493109 VGFO15240 615 aaPredicted RBP17.12■□□□□ 0.33
COL12A1-209ENST00000493109 HS3ST6Q96QI5 342 aa17.12■□□□□ 0.33
COL12A1-209ENST00000493109 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
COL12A1-209ENST00000493109 FAM205CA6NFA0 338 aa17.09■□□□□ 0.33
COL12A1-209ENST00000493109 KRTAP3-3Q9BYR6 98 aa17.09■□□□□ 0.33
COL12A1-209ENST00000493109 KRTAP3-2Q9BYR7 98 aa17.09■□□□□ 0.33
COL12A1-209ENST00000493109 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
COL12A1-209ENST00000493109 MMRN1Q13201 1228 aa17.08■□□□□ 0.32
COL12A1-209ENST00000493109 SOX12O15370 315 aa17.07■□□□□ 0.32
COL12A1-209ENST00000493109 HOXB1P14653 301 aaPredicted RBP17.01■□□□□ 0.31
COL12A1-209ENST00000493109 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
COL12A1-209ENST00000493109 FBXO22Q8NEZ5 403 aa16.96■□□□□ 0.31
COL12A1-209ENST00000493109 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
COL12A1-209ENST00000493109 ZNF710Q8N1W2 664 aa16.94■□□□□ 0.3
COL12A1-209ENST00000493109 MFRPQ9BY79 579 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms