RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
VPS36-205ENST00000492650 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
VPS36-205ENST00000492650 NUBP1P53384 320 aa11.05□□□□□ -0.64
VPS36-205ENST00000492650 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
VPS36-205ENST00000492650 FAM212AQ96EL1 285 aa11□□□□□ -0.65
VPS36-205ENST00000492650 MS4A3Q96HJ5 214 aa11□□□□□ -0.65
VPS36-205ENST00000492650 KIF12Q96FN5 646 aa10.98□□□□□ -0.65
VPS36-205ENST00000492650 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
VPS36-205ENST00000492650 MAP3K13O43283 966 aa10.95□□□□□ -0.66
VPS36-205ENST00000492650 IFNLR1Q8IU57 520 aaPredicted RBP10.91□□□□□ -0.66
VPS36-205ENST00000492650 PCDHB13Q9Y5F0 798 aa10.89□□□□□ -0.67
VPS36-205ENST00000492650 LHX8Q68G74 356 aa10.88□□□□□ -0.67
VPS36-205ENST00000492650 PYGBP11216 843 aa10.86□□□□□ -0.67
VPS36-205ENST00000492650 SPOCK2Q92563 424 aa10.86□□□□□ -0.67
VPS36-205ENST00000492650 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
VPS36-205ENST00000492650 GSE1Q14687 1217 aa10.85□□□□□ -0.67
VPS36-205ENST00000492650 ASTLQ6HA08 431 aaPredicted RBP10.85□□□□□ -0.67
VPS36-205ENST00000492650 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
VPS36-205ENST00000492650 TRPC6Q9Y210 931 aa10.85□□□□□ -0.67
VPS36-205ENST00000492650 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
VPS36-205ENST00000492650 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
VPS36-205ENST00000492650 BMP2KQ9NSY1 1161 aaPredicted RBP10.81□□□□□ -0.68
VPS36-205ENST00000492650 TIE1P35590 1138 aa10.8□□□□□ -0.68
VPS36-205ENST00000492650 ATN1P54259 1190 aaPredicted RBP10.8□□□□□ -0.68
VPS36-205ENST00000492650 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
VPS36-205ENST00000492650 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
VPS36-205ENST00000492650 C7P10643 843 aa10.76□□□□□ -0.69
VPS36-205ENST00000492650 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
VPS36-205ENST00000492650 TTLL13PA6NNM8 815 aa10.75□□□□□ -0.69
VPS36-205ENST00000492650 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
VPS36-205ENST00000492650 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
VPS36-205ENST00000492650 CHRM1P11229 460 aaPredicted RBP10.71□□□□□ -0.69
VPS36-205ENST00000492650 TRIM35Q9UPQ4 493 aa10.7□□□□□ -0.7
VPS36-205ENST00000492650 ZNF467Q7Z7K2 595 aaPredicted RBP10.69□□□□□ -0.7
VPS36-205ENST00000492650 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
VPS36-205ENST00000492650 SEC24BO95487 1268 aa10.66□□□□□ -0.7
VPS36-205ENST00000492650 IER5LQ5T953 404 aa10.61□□□□□ -0.71
VPS36-205ENST00000492650 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
VPS36-205ENST00000492650 POTEFA5A3E0 1075 aa10.6□□□□□ -0.71
VPS36-205ENST00000492650 PSEN1P49768 467 aa10.6□□□□□ -0.71
VPS36-205ENST00000492650 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
VPS36-205ENST00000492650 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
VPS36-205ENST00000492650 GOLGA2Q08379 1002 aa10.58□□□□□ -0.72
VPS36-205ENST00000492650 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
VPS36-205ENST00000492650 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
VPS36-205ENST00000492650 PLCG2P16885 1265 aa10.55□□□□□ -0.72
VPS36-205ENST00000492650 MAMSTRQ6ZN01 415 aa10.55□□□□□ -0.72
VPS36-205ENST00000492650 MKRN3Q13064 507 aaKnown RBP10.52□□□□□ -0.73
VPS36-205ENST00000492650 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
VPS36-205ENST00000492650 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
VPS36-205ENST00000492650 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
VPS36-205ENST00000492650 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
VPS36-205ENST00000492650 RIOK3O14730 519 aaKnown RBP10.47□□□□□ -0.73
VPS36-205ENST00000492650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.747e-8■■□□□ 12.8
VPS36-205ENST00000492650 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
VPS36-205ENST00000492650 RNF25Q96BH1 459 aaPredicted RBP10.44□□□□□ -0.74
VPS36-205ENST00000492650 PLSCR2Q9NRY7 297 aa10.43□□□□□ -0.74
VPS36-205ENST00000492650 VGFO15240 615 aaPredicted RBP10.4□□□□□ -0.74
VPS36-205ENST00000492650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.39□□□□□ -0.75
VPS36-205ENST00000492650 PKD2Q13563 968 aa10.39□□□□□ -0.75
VPS36-205ENST00000492650 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
VPS36-205ENST00000492650 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
VPS36-205ENST00000492650 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
VPS36-205ENST00000492650 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
VPS36-205ENST00000492650 SLAIN1Q8ND83 568 aa10.36□□□□□ -0.75
VPS36-205ENST00000492650 L3MBTL3Q96JM7 780 aaPredicted RBP10.36□□□□□ -0.75
VPS36-205ENST00000492650 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.34□□□□□ -0.75
VPS36-205ENST00000492650 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
VPS36-205ENST00000492650 G3V3G9 751 aa10.32□□□□□ -0.76
VPS36-205ENST00000492650 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
VPS36-205ENST00000492650 RGL2O15211 777 aa10.31□□□□□ -0.76
VPS36-205ENST00000492650 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
VPS36-205ENST00000492650 ILDR1Q86SU0 546 aaPredicted RBP10.31□□□□□ -0.76
VPS36-205ENST00000492650 BCL11BQ9C0K0 894 aaPredicted RBP10.3□□□□□ -0.76
VPS36-205ENST00000492650 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
VPS36-205ENST00000492650 STK25O00506 426 aa10.28□□□□□ -0.76
VPS36-205ENST00000492650 SOX12O15370 315 aa10.28□□□□□ -0.76
VPS36-205ENST00000492650 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
VPS36-205ENST00000492650 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
VPS36-205ENST00000492650 POTEMA6NI47 508 aa10.22□□□□□ -0.77
VPS36-205ENST00000492650 POTEGQ6S5H5 508 aa10.21□□□□□ -0.77
VPS36-205ENST00000492650 NLRP6P59044 892 aa10.2□□□□□ -0.78
VPS36-205ENST00000492650 SNPHO15079 494 aa10.18□□□□□ -0.78
VPS36-205ENST00000492650 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
VPS36-205ENST00000492650 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
VPS36-205ENST00000492650 ST18O60284 1047 aa10.15□□□□□ -0.78
VPS36-205ENST00000492650 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
VPS36-205ENST00000492650 TMEM121BQ9BXQ6 578 aaPredicted RBP10.15□□□□□ -0.78
VPS36-205ENST00000492650 MFRPQ9BY79 579 aa10.15□□□□□ -0.78
VPS36-205ENST00000492650 FBXO22Q8NEZ5 403 aa10.14□□□□□ -0.79
VPS36-205ENST00000492650 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
VPS36-205ENST00000492650 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
VPS36-205ENST00000492650 DCAF8L2P0C7V8 631 aa10.06□□□□□ -0.8
VPS36-205ENST00000492650 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
VPS36-205ENST00000492650 MARVELD3Q96A59 401 aa10.03□□□□□ -0.8
VPS36-205ENST00000492650 PCDH10Q9P2E7 1040 aa10.03□□□□□ -0.8
VPS36-205ENST00000492650 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
VPS36-205ENST00000492650 DOK7Q18PE1 504 aa10.01□□□□□ -0.81
VPS36-205ENST00000492650 PPP1R37O75864 691 aa9.99□□□□□ -0.81
VPS36-205ENST00000492650 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms