RNA–Protein interactions for RNA: ENST00000492262.1

ZNF638-223, Transcript of zinc finger protein 638, human

TSL 2

Gene ZNF638, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF638-223	ENST00000492262	PRR29	P0C7W0	189 aa		12.05	□□□□□ -0.48
ZNF638-223	ENST00000492262	SPRYD3	Q8NCJ5	442 aa		12.04	□□□□□ -0.48
ZNF638-223	ENST00000492262	CFAP44	Q96MT7	982 aa		12.04	□□□□□ -0.48
ZNF638-223	ENST00000492262	CLEC11A	Q9Y240	323 aa		12.04	□□□□□ -0.48
ZNF638-223	ENST00000492262	PITPNM1	O00562	1244 aa		12	□□□□□ -0.49
ZNF638-223	ENST00000492262	TSHZ2	Q9NRE2	1034 aa		12	□□□□□ -0.49
ZNF638-223	ENST00000492262	CHRM1	P11229	460 aa	Predicted RBP	11.99	□□□□□ -0.49
ZNF638-223	ENST00000492262	RASEF	Q8IZ41	740 aa		11.99	□□□□□ -0.49
ZNF638-223	ENST00000492262	BCAN	Q96GW7	911 aa		11.98	□□□□□ -0.49
ZNF638-223	ENST00000492262	RIOK3	O14730	519 aa	Known RBP	11.97	□□□□□ -0.49
ZNF638-223	ENST00000492262	DCAF8	Q5TAQ9	597 aa		11.97	□□□□□ -0.49
ZNF638-223	ENST00000492262	NKX1-1	Q15270	411 aa	Predicted RBP	11.96	□□□□□ -0.49
ZNF638-223	ENST00000492262	FAM212A	Q96EL1	285 aa		11.96	□□□□□ -0.49
ZNF638-223	ENST00000492262	SGIP1	Q9BQI5	828 aa		11.9	□□□□□ -0.5
ZNF638-223	ENST00000492262	VGF	O15240	615 aa	Predicted RBP	11.87	□□□□□ -0.51
ZNF638-223	ENST00000492262	GTPBP6	O43824	516 aa	Predicted RBP	11.86	□□□□□ -0.51
ZNF638-223	ENST00000492262	TAOK2	Q9UL54	1235 aa		11.86	□□□□□ -0.51
ZNF638-223	ENST00000492262	STK25	O00506	426 aa		11.81	□□□□□ -0.52
ZNF638-223	ENST00000492262	PYGB	P11216	843 aa		11.8	□□□□□ -0.52
ZNF638-223	ENST00000492262	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.79	□□□□□ -0.52
ZNF638-223	ENST00000492262	ZFP91	Q96JP5	570 aa	Predicted RBP	11.79	□□□□□ -0.52
ZNF638-223	ENST00000492262	CHADL	Q6NUI6	762 aa		11.77	□□□□□ -0.53
ZNF638-223	ENST00000492262	PRKCSH	P14314	528 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF638-223	ENST00000492262	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF638-223	ENST00000492262	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.75	□□□□□ -0.53
ZNF638-223	ENST00000492262	STK24	Q9Y6E0	443 aa		11.71	□□□□□ -0.53
ZNF638-223	ENST00000492262	FXR2	P51116	673 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	8e-8	■□□□□ 8.7
ZNF638-223	ENST00000492262	CCDC61	Q9Y6R9	512 aa		11.68	□□□□□ -0.54
ZNF638-223	ENST00000492262	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.67	□□□□□ -0.54
ZNF638-223	ENST00000492262	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.65	□□□□□ -0.54
ZNF638-223	ENST00000492262	PRKAR2A	P13861	404 aa	Known RBP	11.64	□□□□□ -0.55
ZNF638-223	ENST00000492262	RYDEN	Q9NUL5	291 aa	Known RBP	11.63	□□□□□ -0.55
ZNF638-223	ENST00000492262	PDAP1	Q13442	181 aa	Known RBP	11.61	□□□□□ -0.55
ZNF638-223	ENST00000492262	TPRN	Q4KMQ1	711 aa		11.61	□□□□□ -0.55
ZNF638-223	ENST00000492262	POTEH	Q6S545	545 aa		11.59	□□□□□ -0.55
ZNF638-223	ENST00000492262	ZNF579	Q8NAF0	562 aa	Known RBP	11.59	□□□□□ -0.55
ZNF638-223	ENST00000492262	PCDHB8	Q9UN66	801 aa		11.59	□□□□□ -0.55
ZNF638-223	ENST00000492262	PCDHB13	Q9Y5F0	798 aa		11.59	□□□□□ -0.55
ZNF638-223	ENST00000492262	CHRDL2	Q6WN34	429 aa		11.56	□□□□□ -0.56
ZNF638-223	ENST00000492262	PIP4P2	Q8N4L2	257 aa		11.54	□□□□□ -0.56
ZNF638-223	ENST00000492262	PSEN1	P49768	467 aa		11.53	□□□□□ -0.56
ZNF638-223	ENST00000492262	MFRP	Q9BY79	579 aa		11.53	□□□□□ -0.56
ZNF638-223	ENST00000492262	NBR1	Q14596	966 aa		11.52	□□□□□ -0.57
ZNF638-223	ENST00000492262	CADPS2	Q86UW7	1296 aa		11.52	□□□□□ -0.57
ZNF638-223	ENST00000492262	IFNL1	Q8IU54	200 aa		11.51	□□□□□ -0.57
ZNF638-223	ENST00000492262	KIF12	Q96FN5	646 aa		11.51	□□□□□ -0.57
ZNF638-223	ENST00000492262	MAP3K13	O43283	966 aa		11.48	□□□□□ -0.57
ZNF638-223	ENST00000492262	FBXO22	Q8NEZ5	403 aa		11.46	□□□□□ -0.57
ZNF638-223	ENST00000492262	PAK3	O75914	559 aa	Predicted RBP	11.42	□□□□□ -0.58
ZNF638-223	ENST00000492262	PPP1R37	O75864	691 aa		11.41	□□□□□ -0.58
ZNF638-223	ENST00000492262	EFCAB3	Q8N7B9	438 aa		11.4	□□□□□ -0.58
ZNF638-223	ENST00000492262	KCNV2	Q8TDN2	545 aa		11.38	□□□□□ -0.59
ZNF638-223	ENST00000492262	SOX12	O15370	315 aa		11.37	□□□□□ -0.59
ZNF638-223	ENST00000492262	P3H3	Q8IVL6	736 aa		11.37	□□□□□ -0.59
ZNF638-223	ENST00000492262	NISCH	Q9Y2I1	1504 aa		11.36	□□□□□ -0.59
ZNF638-223	ENST00000492262	CABP2	Q9NPB3	220 aa		11.36	□□□□□ -0.59
ZNF638-223	ENST00000492262	PHF12	Q96QT6	1004 aa		11.35	□□□□□ -0.59
ZNF638-223	ENST00000492262	PHF8	Q9UPP1	1060 aa		11.35	□□□□□ -0.59
ZNF638-223	ENST00000492262	CD44	P16070	742 aa	Known RBP	11.34	□□□□□ -0.59
ZNF638-223	ENST00000492262	NLRP6	P59044	892 aa		11.34	□□□□□ -0.59
ZNF638-223	ENST00000492262	ZRANB1	Q9UGI0	708 aa		11.34	□□□□□ -0.59
ZNF638-223	ENST00000492262	MS4A4A	Q96JQ5	239 aa		11.32	□□□□□ -0.6
ZNF638-223	ENST00000492262	C19orf67	A6NJJ6	358 aa		11.27	□□□□□ -0.61
ZNF638-223	ENST00000492262	WDR70	Q9NW82	654 aa		11.27	□□□□□ -0.61
ZNF638-223	ENST00000492262	TRPC6	Q9Y210	931 aa		11.27	□□□□□ -0.61
ZNF638-223	ENST00000492262	NCKAP5L	Q9HCH0	1330 aa		11.26	□□□□□ -0.61
ZNF638-223	ENST00000492262	ILDR1	Q86SU0	546 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF638-223	ENST00000492262	MS4A3	Q96HJ5	214 aa		11.23	□□□□□ -0.61
ZNF638-223	ENST00000492262	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
ZNF638-223	ENST00000492262	ARHGEF1	Q92888	912 aa	Known RBP	11.22	□□□□□ -0.61
ZNF638-223	ENST00000492262	TMEM106C	Q9BVX2	250 aa		11.22	□□□□□ -0.61
ZNF638-223	ENST00000492262	MFSD10	Q14728	455 aa		11.21	□□□□□ -0.61
ZNF638-223	ENST00000492262	CRISPLD2	Q9H0B8	497 aa		11.2	□□□□□ -0.62
ZNF638-223	ENST00000492262	E2F4	Q16254	413 aa		11.19	□□□□□ -0.62
ZNF638-223	ENST00000492262	LMOD2	Q6P5Q4	547 aa		11.16	□□□□□ -0.62
ZNF638-223	ENST00000492262	TIE1	P35590	1138 aa		11.15	□□□□□ -0.62
ZNF638-223	ENST00000492262	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.15	□□□□□ -0.62
ZNF638-223	ENST00000492262	TTLL13P	A6NNM8	815 aa		11.14	□□□□□ -0.63
ZNF638-223	ENST00000492262	TESPA1	A2RU30	521 aa	Predicted RBP	11.13	□□□□□ -0.63
ZNF638-223	ENST00000492262	PDE4A	P27815	886 aa		11.12	□□□□□ -0.63
ZNF638-223	ENST00000492262	CAMK2B	Q13554	666 aa		11.12	□□□□□ -0.63
ZNF638-223	ENST00000492262	LARP6	Q9BRS8	491 aa	Known RBP	11.12	□□□□□ -0.63
ZNF638-223	ENST00000492262	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.11	□□□□□ -0.63
ZNF638-223	ENST00000492262	SEMA3E	O15041	775 aa		11.09	□□□□□ -0.63
ZNF638-223	ENST00000492262	MKRN3	Q13064	507 aa	Known RBP	11.09	□□□□□ -0.63
ZNF638-223	ENST00000492262	GOLGA2	Q08379	1002 aa		11.08	□□□□□ -0.64
ZNF638-223	ENST00000492262	DDX27	Q96GQ7	796 aa	Known RBP	11.07	□□□□□ -0.64
ZNF638-223	ENST00000492262	GALR2	O43603	387 aa	Predicted RBP	11.06	□□□□□ -0.64
ZNF638-223	ENST00000492262	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.03	□□□□□ -0.64	1e-11	■■■■■ 34.7
ZNF638-223	ENST00000492262	EVX2	Q03828	476 aa		11.02	□□□□□ -0.65
ZNF638-223	ENST00000492262	ZC3H15	Q8WU90	426 aa	Known RBP	11.02	□□□□□ -0.65
ZNF638-223	ENST00000492262	GPHN	Q9NQX3	736 aa	Predicted RBP	11.02	□□□□□ -0.65
ZNF638-223	ENST00000492262	TRIM35	Q9UPQ4	493 aa		11.02	□□□□□ -0.65
ZNF638-223	ENST00000492262	PDCD7	Q8N8D1	485 aa	Known RBP	11.01	□□□□□ -0.65
ZNF638-223	ENST00000492262	DPY19L2	Q6NUT2	758 aa		10.99	□□□□□ -0.65
ZNF638-223	ENST00000492262	HAX1	O00165	279 aa		10.98	□□□□□ -0.65
ZNF638-223	ENST00000492262	TULP1	O00294	542 aa	Predicted RBP	10.98	□□□□□ -0.65
ZNF638-223	ENST00000492262	CLCN6	P51797	869 aa		10.97	□□□□□ -0.65
ZNF638-223	ENST00000492262	PPP1R15B	Q5SWA1	713 aa		10.97	□□□□□ -0.65
ZNF638-223	ENST00000492262	MICALL2	Q8IY33	904 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms