RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
CLIP4-211ENST00000491701 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
CLIP4-211ENST00000491701 ASTLQ6HA08 431 aaPredicted RBP9.1□□□□□ -0.95
CLIP4-211ENST00000491701 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
CLIP4-211ENST00000491701 PROM2Q8N271 834 aa9.07□□□□□ -0.96
CLIP4-211ENST00000491701 METRNQ9UJH8 293 aa9.07□□□□□ -0.96
CLIP4-211ENST00000491701 POTEJP0CG39 1038 aa9.06□□□□□ -0.96
CLIP4-211ENST00000491701 TSPYL2Q9H2G4 693 aaPredicted RBP9.05□□□□□ -0.96
CLIP4-211ENST00000491701 POTEMA6NI47 508 aa9.05□□□□□ -0.96
CLIP4-211ENST00000491701 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
CLIP4-211ENST00000491701 CCDC61Q9Y6R9 512 aa9.03□□□□□ -0.96
CLIP4-211ENST00000491701 C7P10643 843 aa9.02□□□□□ -0.97
CLIP4-211ENST00000491701 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
CLIP4-211ENST00000491701 ATN1P54259 1190 aaPredicted RBP9□□□□□ -0.97
CLIP4-211ENST00000491701 KIF12Q96FN5 646 aa8.98□□□□□ -0.97
CLIP4-211ENST00000491701 TRPC6Q9Y210 931 aa8.97□□□□□ -0.97
CLIP4-211ENST00000491701 CCDC180Q9P1Z9 1646 aa8.95□□□□□ -0.98
CLIP4-211ENST00000491701 POTEFA5A3E0 1075 aa8.95□□□□□ -0.98
CLIP4-211ENST00000491701 BMP2KQ9NSY1 1161 aaPredicted RBP8.95□□□□□ -0.98
CLIP4-211ENST00000491701 MAP3K13O43283 966 aa8.93□□□□□ -0.98
CLIP4-211ENST00000491701 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
CLIP4-211ENST00000491701 MAMSTRQ6ZN01 415 aa8.93□□□□□ -0.98
CLIP4-211ENST00000491701 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
CLIP4-211ENST00000491701 MIER1Q8N108 512 aa8.91□□□□□ -0.98
CLIP4-211ENST00000491701 SCUBE2Q9NQ36 999 aa8.89□□□□□ -0.99
CLIP4-211ENST00000491701 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
CLIP4-211ENST00000491701 TIE1P35590 1138 aa8.88□□□□□ -0.99
CLIP4-211ENST00000491701 PLEKHG5O94827 1062 aa8.87□□□□□ -0.99
CLIP4-211ENST00000491701 FAM163AQ96GL9 167 aaPredicted RBP8.87□□□□□ -0.99
CLIP4-211ENST00000491701 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
CLIP4-211ENST00000491701 PCDH10Q9P2E7 1040 aa8.85□□□□□ -0.99
CLIP4-211ENST00000491701 COLQQ9Y215 455 aaPredicted RBP8.85□□□□□ -0.99
CLIP4-211ENST00000491701 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
CLIP4-211ENST00000491701 SEC24BO95487 1268 aa8.8□□□□□ -1
CLIP4-211ENST00000491701 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
CLIP4-211ENST00000491701 PCDHB13Q9Y5F0 798 aa8.8□□□□□ -1
CLIP4-211ENST00000491701 NUBP1P53384 320 aa8.79□□□□□ -1
CLIP4-211ENST00000491701 SGIP1Q9BQI5 828 aa8.78□□□□□ -1
CLIP4-211ENST00000491701 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
CLIP4-211ENST00000491701 IER5LQ5T953 404 aa8.75□□□□□ -1.01
CLIP4-211ENST00000491701 IFNL1Q8IU54 200 aa8.75□□□□□ -1.01
CLIP4-211ENST00000491701 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
CLIP4-211ENST00000491701 ZBTB47Q9UFB7 747 aaPredicted RBP8.71□□□□□ -1.01
CLIP4-211ENST00000491701 TMEM106CQ9BVX2 250 aa8.71□□□□□ -1.02
CLIP4-211ENST00000491701 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
CLIP4-211ENST00000491701 CDAN1Q8IWY9 1227 aa8.68□□□□□ -1.02
CLIP4-211ENST00000491701 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
CLIP4-211ENST00000491701 IRX5P78411 483 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-211ENST00000491701 ST18O60284 1047 aa8.65□□□□□ -1.02
CLIP4-211ENST00000491701 PLCG2P16885 1265 aa8.65□□□□□ -1.02
CLIP4-211ENST00000491701 IFNLR1Q8IU57 520 aaPredicted RBP8.65□□□□□ -1.02
CLIP4-211ENST00000491701 PYGBP11216 843 aa8.63□□□□□ -1.03
CLIP4-211ENST00000491701 ABCC9O60706 1549 aa8.63□□□□□ -1.03
CLIP4-211ENST00000491701 ZCCHC6Q5VYS8 1495 aaKnown RBP8.61□□□□□ -1.03
CLIP4-211ENST00000491701 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
CLIP4-211ENST00000491701 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
CLIP4-211ENST00000491701 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
CLIP4-211ENST00000491701 SPOCK2Q92563 424 aa8.56□□□□□ -1.04
CLIP4-211ENST00000491701 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.52□□□□□ -1.05
CLIP4-211ENST00000491701 CIZ1Q9ULV3 898 aaPredicted RBP8.51□□□□□ -1.05
CLIP4-211ENST00000491701 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
CLIP4-211ENST00000491701 MARVELD3Q96A59 401 aa8.5□□□□□ -1.05
CLIP4-211ENST00000491701 TMEM121BQ9BXQ6 578 aaPredicted RBP8.5□□□□□ -1.05
CLIP4-211ENST00000491701 DCAF1Q9Y4B6 1507 aa8.5□□□□□ -1.05
CLIP4-211ENST00000491701 SNPHO15079 494 aa8.48□□□□□ -1.05
CLIP4-211ENST00000491701 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
CLIP4-211ENST00000491701 SPNS2Q8IVW8 549 aa8.47□□□□□ -1.05
CLIP4-211ENST00000491701 ZNF467Q7Z7K2 595 aaPredicted RBP8.46□□□□□ -1.06
CLIP4-211ENST00000491701 MKRN3Q13064 507 aaKnown RBP8.44□□□□□ -1.06
CLIP4-211ENST00000491701 GSE1Q14687 1217 aa8.44□□□□□ -1.06
CLIP4-211ENST00000491701 C3orf67Q6ZVT6 689 aa8.43□□□□□ -1.06
CLIP4-211ENST00000491701 MYO15BQ96JP2 1530 aa8.42□□□□□ -1.06
CLIP4-211ENST00000491701 GOLGA2Q08379 1002 aa8.42□□□□□ -1.06
CLIP4-211ENST00000491701 DCAF8L2P0C7V8 631 aa8.41□□□□□ -1.06
CLIP4-211ENST00000491701 CHRM1P11229 460 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-211ENST00000491701 L3MBTL3Q96JM7 780 aaPredicted RBP8.41□□□□□ -1.06
CLIP4-211ENST00000491701 PRKCSHP14314 528 aaPredicted RBP8.4□□□□□ -1.06
CLIP4-211ENST00000491701 PSEN1P49768 467 aa8.4□□□□□ -1.06
CLIP4-211ENST00000491701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLIP4-211ENST00000491701 POTEB3A0JP26 581 aa8.39□□□□□ -1.07
CLIP4-211ENST00000491701 POTEBQ6S5H4 581 aa8.39□□□□□ -1.07
CLIP4-211ENST00000491701 ECM2O94769 699 aaPredicted RBP8.38□□□□□ -1.07
CLIP4-211ENST00000491701 EMP3P54852 163 aa8.38□□□□□ -1.07
CLIP4-211ENST00000491701 PLCB2Q00722 1185 aa8.38□□□□□ -1.07
CLIP4-211ENST00000491701 ILDR1Q86SU0 546 aaPredicted RBP8.37□□□□□ -1.07
CLIP4-211ENST00000491701 PKD2Q13563 968 aa8.37□□□□□ -1.07
CLIP4-211ENST00000491701 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
CLIP4-211ENST00000491701 BCANQ96GW7 911 aa8.37□□□□□ -1.07
CLIP4-211ENST00000491701 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
CLIP4-211ENST00000491701 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
CLIP4-211ENST00000491701 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
CLIP4-211ENST00000491701 NACADO15069 1562 aa8.35□□□□□ -1.07
CLIP4-211ENST00000491701 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
CLIP4-211ENST00000491701 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
CLIP4-211ENST00000491701 TAOK2Q9UL54 1235 aa8.33□□□□□ -1.08
CLIP4-211ENST00000491701 CABP2Q9NPB3 220 aa8.31□□□□□ -1.08
CLIP4-211ENST00000491701 HOXB3P14651 431 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-211ENST00000491701 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
CLIP4-211ENST00000491701 RGL2O15211 777 aa8.27□□□□□ -1.09
CLIP4-211ENST00000491701 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms