RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
ABCB1-208ENST00000491360 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
ABCB1-208ENST00000491360 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
ABCB1-208ENST00000491360 POTEMA6NI47 508 aa11.53□□□□□ -0.56
ABCB1-208ENST00000491360 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
ABCB1-208ENST00000491360 PROM2Q8N271 834 aa11.52□□□□□ -0.57
ABCB1-208ENST00000491360 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
ABCB1-208ENST00000491360 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
ABCB1-208ENST00000491360 CCDC61Q9Y6R9 512 aa11.48□□□□□ -0.57
ABCB1-208ENST00000491360 PCDH10Q9P2E7 1040 aa11.46□□□□□ -0.57
ABCB1-208ENST00000491360 KIF12Q96FN5 646 aa11.45□□□□□ -0.58
ABCB1-208ENST00000491360 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
ABCB1-208ENST00000491360 SCUBE2Q9NQ36 999 aa11.43□□□□□ -0.58
ABCB1-208ENST00000491360 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
ABCB1-208ENST00000491360 MIER1Q8N108 512 aa11.42□□□□□ -0.58
ABCB1-208ENST00000491360 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
ABCB1-208ENST00000491360 TIE1P35590 1138 aa11.36□□□□□ -0.59
ABCB1-208ENST00000491360 MAP3K13O43283 966 aa11.35□□□□□ -0.59
ABCB1-208ENST00000491360 FAM163AQ96GL9 167 aaPredicted RBP11.34□□□□□ -0.59
ABCB1-208ENST00000491360 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
ABCB1-208ENST00000491360 SEC24BO95487 1268 aa11.3□□□□□ -0.6
ABCB1-208ENST00000491360 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
ABCB1-208ENST00000491360 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
ABCB1-208ENST00000491360 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
ABCB1-208ENST00000491360 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
ABCB1-208ENST00000491360 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
ABCB1-208ENST00000491360 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
ABCB1-208ENST00000491360 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
ABCB1-208ENST00000491360 IER5LQ5T953 404 aa11.24□□□□□ -0.61
ABCB1-208ENST00000491360 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
ABCB1-208ENST00000491360 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
ABCB1-208ENST00000491360 TRIM35Q9UPQ4 493 aa11.2□□□□□ -0.62
ABCB1-208ENST00000491360 NUBP1P53384 320 aa11.17□□□□□ -0.62
ABCB1-208ENST00000491360 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
ABCB1-208ENST00000491360 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
ABCB1-208ENST00000491360 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
ABCB1-208ENST00000491360 PLCG2P16885 1265 aa11.09□□□□□ -0.63
ABCB1-208ENST00000491360 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
ABCB1-208ENST00000491360 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
ABCB1-208ENST00000491360 ST18O60284 1047 aa11.02□□□□□ -0.65
ABCB1-208ENST00000491360 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
ABCB1-208ENST00000491360 OCEL1Q9H607 264 aa11.01□□□□□ -0.65
ABCB1-208ENST00000491360 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
ABCB1-208ENST00000491360 FKBP8Q14318 412 aa10.97□□□□□ -0.65
ABCB1-208ENST00000491360 SNPHO15079 494 aa10.96□□□□□ -0.65
ABCB1-208ENST00000491360 PYGBP11216 843 aa10.95□□□□□ -0.66
ABCB1-208ENST00000491360 TMEM121BQ9BXQ6 578 aaPredicted RBP10.95□□□□□ -0.66
ABCB1-208ENST00000491360 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
ABCB1-208ENST00000491360 FBXO3Q9UK99 471 aa10.93□□□□□ -0.66
ABCB1-208ENST00000491360 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
ABCB1-208ENST00000491360 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
ABCB1-208ENST00000491360 GSE1Q14687 1217 aa10.85□□□□□ -0.67
ABCB1-208ENST00000491360 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
ABCB1-208ENST00000491360 MKRN3Q13064 507 aaKnown RBP10.83□□□□□ -0.68
ABCB1-208ENST00000491360 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
ABCB1-208ENST00000491360 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
ABCB1-208ENST00000491360 KLHL34Q8N239 644 aa10.82□□□□□ -0.68
ABCB1-208ENST00000491360 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
ABCB1-208ENST00000491360 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
ABCB1-208ENST00000491360 CHRM1P11229 460 aaPredicted RBP10.79□□□□□ -0.68
ABCB1-208ENST00000491360 MARVELD3Q96A59 401 aa10.79□□□□□ -0.68
ABCB1-208ENST00000491360 PDCD7Q8N8D1 485 aaKnown RBP10.78□□□□□ -0.68
ABCB1-208ENST00000491360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.69
ABCB1-208ENST00000491360 PSEN1P49768 467 aa10.73□□□□□ -0.69
ABCB1-208ENST00000491360 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
ABCB1-208ENST00000491360 EMP3P54852 163 aa10.73□□□□□ -0.69
ABCB1-208ENST00000491360 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
ABCB1-208ENST00000491360 G3V3G9 751 aa10.65□□□□□ -0.7
ABCB1-208ENST00000491360 ILDR1Q86SU0 546 aaPredicted RBP10.65□□□□□ -0.7
ABCB1-208ENST00000491360 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
ABCB1-208ENST00000491360 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
ABCB1-208ENST00000491360 BOLA1Q9Y3E2 137 aa10.6□□□□□ -0.71
ABCB1-208ENST00000491360 DPY19L2Q6NUT2 758 aa10.59□□□□□ -0.71
ABCB1-208ENST00000491360 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
ABCB1-208ENST00000491360 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
ABCB1-208ENST00000491360 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
ABCB1-208ENST00000491360 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
ABCB1-208ENST00000491360 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
ABCB1-208ENST00000491360 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
ABCB1-208ENST00000491360 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
ABCB1-208ENST00000491360 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
ABCB1-208ENST00000491360 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
ABCB1-208ENST00000491360 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
ABCB1-208ENST00000491360 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
ABCB1-208ENST00000491360 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
ABCB1-208ENST00000491360 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
ABCB1-208ENST00000491360 ERBB3P21860 1342 aa10.48□□□□□ -0.73
ABCB1-208ENST00000491360 TRIM41Q8WV44 630 aa10.46□□□□□ -0.73
ABCB1-208ENST00000491360 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
ABCB1-208ENST00000491360 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
ABCB1-208ENST00000491360 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
ABCB1-208ENST00000491360 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
ABCB1-208ENST00000491360 SOX12O15370 315 aa10.36□□□□□ -0.75
ABCB1-208ENST00000491360 MICALL2Q8IY33 904 aa10.36□□□□□ -0.75
ABCB1-208ENST00000491360 ZNF687Q8N1G0 1237 aa10.34□□□□□ -0.75
ABCB1-208ENST00000491360 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
ABCB1-208ENST00000491360 PTGER2P43116 358 aa10.3□□□□□ -0.76
ABCB1-208ENST00000491360 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
ABCB1-208ENST00000491360 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
ABCB1-208ENST00000491360 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms