RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 PLCD3Q8N3E9 789 aa12.28□□□□□ -0.44
RBM39-235ENST00000490354 RASEFQ8IZ41 740 aa12.27□□□□□ -0.45
RBM39-235ENST00000490354 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
RBM39-235ENST00000490354 ASTLQ6HA08 431 aaPredicted RBP12.24□□□□□ -0.45
RBM39-235ENST00000490354 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
RBM39-235ENST00000490354 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
RBM39-235ENST00000490354 MAP3K13O43283 966 aa12.18□□□□□ -0.46
RBM39-235ENST00000490354 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
RBM39-235ENST00000490354 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
RBM39-235ENST00000490354 NUBP1P53384 320 aa12.15□□□□□ -0.46
RBM39-235ENST00000490354 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
RBM39-235ENST00000490354 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
RBM39-235ENST00000490354 ZBTB47Q9UFB7 747 aaPredicted RBP12.15□□□□□ -0.46
RBM39-235ENST00000490354 TRPC6Q9Y210 931 aa12.15□□□□□ -0.46
RBM39-235ENST00000490354 C7P10643 843 aa12.12□□□□□ -0.47
RBM39-235ENST00000490354 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
RBM39-235ENST00000490354 TIE1P35590 1138 aa12.07□□□□□ -0.48
RBM39-235ENST00000490354 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
RBM39-235ENST00000490354 PCDHB13Q9Y5F0 798 aa12.05□□□□□ -0.48
RBM39-235ENST00000490354 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
RBM39-235ENST00000490354 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
RBM39-235ENST00000490354 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
RBM39-235ENST00000490354 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
RBM39-235ENST00000490354 POTEFA5A3E0 1075 aa12.01□□□□□ -0.49
RBM39-235ENST00000490354 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
RBM39-235ENST00000490354 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
RBM39-235ENST00000490354 MAMSTRQ6ZN01 415 aa11.95□□□□□ -0.5
RBM39-235ENST00000490354 TRIM35Q9UPQ4 493 aa11.95□□□□□ -0.5
RBM39-235ENST00000490354 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
RBM39-235ENST00000490354 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
RBM39-235ENST00000490354 SEC24BO95487 1268 aa11.91□□□□□ -0.5
RBM39-235ENST00000490354 PYGBP11216 843 aa11.91□□□□□ -0.5
RBM39-235ENST00000490354 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
RBM39-235ENST00000490354 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
RBM39-235ENST00000490354 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
RBM39-235ENST00000490354 IER5LQ5T953 404 aa11.88□□□□□ -0.51
RBM39-235ENST00000490354 POTEMA6NI47 508 aa11.84□□□□□ -0.51
RBM39-235ENST00000490354 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
RBM39-235ENST00000490354 POTEGQ6S5H5 508 aa11.81□□□□□ -0.52
RBM39-235ENST00000490354 GSE1Q14687 1217 aa11.79□□□□□ -0.52
RBM39-235ENST00000490354 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
RBM39-235ENST00000490354 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
RBM39-235ENST00000490354 PLCG2P16885 1265 aa11.76□□□□□ -0.53
RBM39-235ENST00000490354 IRX5P78411 483 aaPredicted RBP11.76□□□□□ -0.53
RBM39-235ENST00000490354 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
RBM39-235ENST00000490354 IFNLR1Q8IU57 520 aaPredicted RBP11.73□□□□□ -0.53
RBM39-235ENST00000490354 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
RBM39-235ENST00000490354 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
RBM39-235ENST00000490354 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
RBM39-235ENST00000490354 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
RBM39-235ENST00000490354 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
RBM39-235ENST00000490354 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
RBM39-235ENST00000490354 PSEN1P49768 467 aa11.62□□□□□ -0.55
RBM39-235ENST00000490354 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
RBM39-235ENST00000490354 PCDH10Q9P2E7 1040 aa11.6□□□□□ -0.55
RBM39-235ENST00000490354 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
RBM39-235ENST00000490354 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
RBM39-235ENST00000490354 PDAP1Q13442 181 aaKnown RBP11.55□□□□□ -0.56
RBM39-235ENST00000490354 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
RBM39-235ENST00000490354 ST18O60284 1047 aa11.54□□□□□ -0.56
RBM39-235ENST00000490354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.566e-51■■■■□ 20.9
RBM39-235ENST00000490354 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
RBM39-235ENST00000490354 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
RBM39-235ENST00000490354 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
RBM39-235ENST00000490354 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
RBM39-235ENST00000490354 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
RBM39-235ENST00000490354 CDAN1Q8IWY9 1227 aa11.45□□□□□ -0.58
RBM39-235ENST00000490354 SNPHO15079 494 aa11.43□□□□□ -0.58
RBM39-235ENST00000490354 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
RBM39-235ENST00000490354 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
RBM39-235ENST00000490354 EFCAB3Q8N7B9 438 aa11.36□□□□□ -0.59
RBM39-235ENST00000490354 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
RBM39-235ENST00000490354 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
RBM39-235ENST00000490354 RNF25Q96BH1 459 aaPredicted RBP11.34□□□□□ -0.59
RBM39-235ENST00000490354 G3V3G9 751 aa11.33□□□□□ -0.6
RBM39-235ENST00000490354 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
RBM39-235ENST00000490354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
RBM39-235ENST00000490354 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
RBM39-235ENST00000490354 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
RBM39-235ENST00000490354 EMP3P54852 163 aa11.26□□□□□ -0.61
RBM39-235ENST00000490354 SOX12O15370 315 aa11.22□□□□□ -0.61
RBM39-235ENST00000490354 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
RBM39-235ENST00000490354 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
RBM39-235ENST00000490354 FAM205CA6NFA0 338 aa11.2□□□□□ -0.62
RBM39-235ENST00000490354 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
RBM39-235ENST00000490354 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
RBM39-235ENST00000490354 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
RBM39-235ENST00000490354 PHF8Q9UPP1 1060 aa11.2□□□□□ -0.62
RBM39-235ENST00000490354 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
RBM39-235ENST00000490354 SPNS2Q8IVW8 549 aa11.18□□□□□ -0.62
RBM39-235ENST00000490354 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
RBM39-235ENST00000490354 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
RBM39-235ENST00000490354 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
RBM39-235ENST00000490354 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
RBM39-235ENST00000490354 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
RBM39-235ENST00000490354 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
RBM39-235ENST00000490354 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
RBM39-235ENST00000490354 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
RBM39-235ENST00000490354 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
RBM39-235ENST00000490354 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms