RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 DNAJC5Q9H3Z4 198 aa4.85□□□□□ -1.63
EPB41-212ENST00000490308 FXR2P51116 673 aaKnown RBP eCLIP4.84□□□□□ -1.63
EPB41-212ENST00000490308 TSHZ2Q9NRE2 1034 aa4.84□□□□□ -1.63
EPB41-212ENST00000490308 HAX1O00165 279 aa4.83□□□□□ -1.64
EPB41-212ENST00000490308 TRIM41Q8WV44 630 aa4.82□□□□□ -1.64
EPB41-212ENST00000490308 ZNF692Q9BU19 519 aaPredicted RBP4.82□□□□□ -1.64
EPB41-212ENST00000490308 SPDYE2BA6NHP3 402 aa4.8□□□□□ -1.64
EPB41-212ENST00000490308 SPDYE6P0CI01 402 aa4.8□□□□□ -1.64
EPB41-212ENST00000490308 SPDYE2Q495Y8 402 aa4.8□□□□□ -1.64
EPB41-212ENST00000490308 PODXL2Q9NZ53 605 aa4.8□□□□□ -1.64
EPB41-212ENST00000490308 STAG3Q9UJ98 1225 aa4.8□□□□□ -1.64
EPB41-212ENST00000490308 NPM1P06748 294 aaKnown RBP eCLIP4.79□□□□□ -1.64
EPB41-212ENST00000490308 PLEKHG5O94827 1062 aa4.78□□□□□ -1.64
EPB41-212ENST00000490308 CHGAP10645 457 aaKnown RBP4.78□□□□□ -1.64
EPB41-212ENST00000490308 P3H3Q8IVL6 736 aa4.78□□□□□ -1.64
EPB41-212ENST00000490308 RYDENQ9NUL5 291 aaKnown RBP4.78□□□□□ -1.64
EPB41-212ENST00000490308 ZBTB47Q9UFB7 747 aaPredicted RBP4.78□□□□□ -1.64
EPB41-212ENST00000490308 SSUH2Q9Y2M2 353 aa4.78□□□□□ -1.64
EPB41-212ENST00000490308 PABPN1Q86U42 306 aaKnown RBP eCLIP4.77□□□□□ -1.65
EPB41-212ENST00000490308 RGL2O15211 777 aa4.74□□□□□ -1.65
EPB41-212ENST00000490308 PLCD3Q8N3E9 789 aa4.74□□□□□ -1.65
EPB41-212ENST00000490308 HS6ST3Q8IZP7 471 aa4.73□□□□□ -1.65
EPB41-212ENST00000490308 NPM2Q86SE8 214 aaKnown RBP4.71□□□□□ -1.66
EPB41-212ENST00000490308 C19orf67A6NJJ6 358 aa4.7□□□□□ -1.66
EPB41-212ENST00000490308 PRKAR2AP13861 404 aaKnown RBP4.7□□□□□ -1.66
EPB41-212ENST00000490308 MIER1Q8N108 512 aa4.69□□□□□ -1.66
EPB41-212ENST00000490308 GABBR2O75899 941 aa4.68□□□□□ -1.66
EPB41-212ENST00000490308 CIZ1Q9ULV3 898 aaPredicted RBP4.68□□□□□ -1.66
EPB41-212ENST00000490308 CLEC11AQ9Y240 323 aa4.68□□□□□ -1.66
EPB41-212ENST00000490308 LHX8Q68G74 356 aa4.67□□□□□ -1.66
EPB41-212ENST00000490308 SUPT5HO00267 1087 aaKnown RBP4.66□□□□□ -1.66
EPB41-212ENST00000490308 CHADLQ6NUI6 762 aa4.66□□□□□ -1.66
EPB41-212ENST00000490308 WDR70Q9NW82 654 aa4.66□□□□□ -1.66
EPB41-212ENST00000490308 GSE1Q14687 1217 aa4.65□□□□□ -1.67
EPB41-212ENST00000490308 SPDYE1Q8NFV5 336 aaPredicted RBP4.65□□□□□ -1.67
EPB41-212ENST00000490308 LMOD2Q6P5Q4 547 aa4.64□□□□□ -1.67
EPB41-212ENST00000490308 RSPH6AQ9H0K4 717 aa4.64□□□□□ -1.67
EPB41-212ENST00000490308 CCDC9Q9Y3X0 531 aaKnown RBP4.64□□□□□ -1.67
EPB41-212ENST00000490308 ZBTB7CA1YPR0 619 aa4.63□□□□□ -1.67
EPB41-212ENST00000490308 POTEIP0CG38 1075 aa4.63□□□□□ -1.67
EPB41-212ENST00000490308 NEUROD2Q15784 382 aa4.63□□□□□ -1.67
EPB41-212ENST00000490308 BRPF1P55201 1214 aaPredicted RBP4.62□□□□□ -1.67
EPB41-212ENST00000490308 MYT1Q01538 1121 aa4.62□□□□□ -1.67
EPB41-212ENST00000490308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.62□□□□□ -1.67
EPB41-212ENST00000490308 ZMYND15Q9H091 742 aa4.61□□□□□ -1.67
EPB41-212ENST00000490308 GTPBP6O43824 516 aaPredicted RBP4.59□□□□□ -1.67
EPB41-212ENST00000490308 PRR29P0C7W0 189 aa4.59□□□□□ -1.67
EPB41-212ENST00000490308 PELP1Q8IZL8 1130 aaKnown RBP4.59□□□□□ -1.67
EPB41-212ENST00000490308 RIOK3O14730 519 aaKnown RBP4.58□□□□□ -1.68
EPB41-212ENST00000490308 VGFO15240 615 aaPredicted RBP4.58□□□□□ -1.68
EPB41-212ENST00000490308 TRIM26Q12899 539 aaPredicted RBP4.58□□□□□ -1.68
EPB41-212ENST00000490308 SMYD5Q6GMV2 418 aa4.58□□□□□ -1.68
EPB41-212ENST00000490308 PDIA4P13667 645 aaKnown RBP4.57□□□□□ -1.68
EPB41-212ENST00000490308 TTBK1Q5TCY1 1321 aaPredicted RBP4.56□□□□□ -1.68
EPB41-212ENST00000490308 STK25O00506 426 aa4.56□□□□□ -1.68
EPB41-212ENST00000490308 UBTFP17480 764 aaKnown RBP4.56□□□□□ -1.68
EPB41-212ENST00000490308 CREBZFQ9NS37 354 aa4.56□□□□□ -1.68
EPB41-212ENST00000490308 ARHGEF1Q92888 912 aaKnown RBP4.54□□□□□ -1.68
EPB41-212ENST00000490308 SGIP1Q9BQI5 828 aa4.54□□□□□ -1.68
EPB41-212ENST00000490308 FARP1Q9Y4F1 1045 aaPredicted RBP4.54□□□□□ -1.68
EPB41-212ENST00000490308 HMGB1P09429 215 aaKnown RBP4.53□□□□□ -1.68
EPB41-212ENST00000490308 CD44P16070 742 aaKnown RBP4.53□□□□□ -1.68
EPB41-212ENST00000490308 NUBP1P53384 320 aa4.53□□□□□ -1.68
EPB41-212ENST00000490308 ZC3H15Q8WU90 426 aaKnown RBP4.53□□□□□ -1.68
EPB41-212ENST00000490308 PCDH10Q9P2E7 1040 aa4.53□□□□□ -1.68
EPB41-212ENST00000490308 MNX1P50219 401 aaPredicted RBP4.52□□□□□ -1.69
EPB41-212ENST00000490308 NKX1-1Q15270 411 aaPredicted RBP4.52□□□□□ -1.69
EPB41-212ENST00000490308 DCAF8Q5TAQ9 597 aa4.52□□□□□ -1.69
EPB41-212ENST00000490308 RASEFQ8IZ41 740 aa4.51□□□□□ -1.69
EPB41-212ENST00000490308 FAM212AQ96EL1 285 aa4.51□□□□□ -1.69
EPB41-212ENST00000490308 FLIIQ13045 1269 aa4.5□□□□□ -1.69
EPB41-212ENST00000490308 KCNV2Q8TDN2 545 aa4.5□□□□□ -1.69
EPB41-212ENST00000490308 RNF25Q96BH1 459 aaPredicted RBP4.5□□□□□ -1.69
EPB41-212ENST00000490308 SLC24A3Q9HC58 644 aa4.5□□□□□ -1.69
EPB41-212ENST00000490308 POTEB2H3BUK9 544 aa4.49□□□□□ -1.69
EPB41-212ENST00000490308 HRCP23327 699 aa4.49□□□□□ -1.69
EPB41-212ENST00000490308 KCTD17Q8N5Z5 321 aa4.49□□□□□ -1.69
EPB41-212ENST00000490308 STK24Q9Y6E0 443 aa4.49□□□□□ -1.69
EPB41-212ENST00000490308 CHRM1P11229 460 aaPredicted RBP4.48□□□□□ -1.69
EPB41-212ENST00000490308 AK7Q96M32 723 aa4.48□□□□□ -1.69
EPB41-212ENST00000490308 ZMYND10O75800 440 aa4.47□□□□□ -1.69
EPB41-212ENST00000490308 PYGBP11216 843 aa4.47□□□□□ -1.69
EPB41-212ENST00000490308 GALR2O43603 387 aaPredicted RBP4.46□□□□□ -1.7
EPB41-212ENST00000490308 ZNF579Q8NAF0 562 aaKnown RBP4.46□□□□□ -1.7
EPB41-212ENST00000490308 OTUD5Q96G74 571 aa4.46□□□□□ -1.7
EPB41-212ENST00000490308 ARID3AQ99856 593 aa4.46□□□□□ -1.7
EPB41-212ENST00000490308 BCL11BQ9C0K0 894 aaPredicted RBP4.46□□□□□ -1.7
EPB41-212ENST00000490308 TSPYL2Q9H2G4 693 aaPredicted RBP4.46□□□□□ -1.7
EPB41-212ENST00000490308 TESPA1A2RU30 521 aaPredicted RBP4.45□□□□□ -1.7
EPB41-212ENST00000490308 PDE4CQ08493 712 aa4.45□□□□□ -1.7
EPB41-212ENST00000490308 E2F4Q16254 413 aa4.45□□□□□ -1.7
EPB41-212ENST00000490308 DCBLD2Q96PD2 775 aa4.45□□□□□ -1.7
EPB41-212ENST00000490308 ZRANB1Q9UGI0 708 aa4.45□□□□□ -1.7
EPB41-212ENST00000490308 POTEMA6NI47 508 aa4.44□□□□□ -1.7
EPB41-212ENST00000490308 APBB1O00213 710 aa4.44□□□□□ -1.7
EPB41-212ENST00000490308 CLCN6P51797 869 aa4.44□□□□□ -1.7
EPB41-212ENST00000490308 BARGINQ6ZT62 677 aa4.44□□□□□ -1.7
EPB41-212ENST00000490308 KRI1Q8N9T8 703 aaKnown RBP4.44□□□□□ -1.7
EPB41-212ENST00000490308 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
EPB41-212ENST00000490308 PATL2C9JE40 543 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms