RNA–Protein interactions for RNA: ENST00000490248.1

NCOA3-204, Transcript of nuclear receptor coactivator 3, humanhuman

TSL 5

Gene NCOA3, Length 226 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA3-204ENST00000490248 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
NCOA3-204ENST00000490248 AMER1Q5JTC6 1135 aaPredicted RBP9.27□□□□□ -0.93
NCOA3-204ENST00000490248 TSPYL2Q9H2G4 693 aaPredicted RBP9.27□□□□□ -0.93
NCOA3-204ENST00000490248 CIZ1Q9ULV3 898 aaPredicted RBP9.25□□□□□ -0.93
NCOA3-204ENST00000490248 CCDC61Q9Y6R9 512 aa9.25□□□□□ -0.93
NCOA3-204ENST00000490248 CHRM1P11229 460 aaPredicted RBP9.23□□□□□ -0.93
NCOA3-204ENST00000490248 SGIP1Q9BQI5 828 aa9.22□□□□□ -0.93
NCOA3-204ENST00000490248 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
NCOA3-204ENST00000490248 EVX2Q03828 476 aa9.16□□□□□ -0.94
NCOA3-204ENST00000490248 KIF12Q96FN5 646 aa9.16□□□□□ -0.94
NCOA3-204ENST00000490248 PKD2Q13563 968 aa9.15□□□□□ -0.94
NCOA3-204ENST00000490248 ZNF467Q7Z7K2 595 aaPredicted RBP9.15□□□□□ -0.94
NCOA3-204ENST00000490248 PHF12Q96QT6 1004 aa9.15□□□□□ -0.94
NCOA3-204ENST00000490248 TAOK2Q9UL54 1235 aa9.14□□□□□ -0.95
NCOA3-204ENST00000490248 ECM2O94769 699 aaPredicted RBP9.13□□□□□ -0.95
NCOA3-204ENST00000490248 PYGBP11216 843 aa9.13□□□□□ -0.95
NCOA3-204ENST00000490248 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
NCOA3-204ENST00000490248 MAP3K13O43283 966 aa9.1□□□□□ -0.95
NCOA3-204ENST00000490248 GABBR2O75899 941 aa9.08□□□□□ -0.96
NCOA3-204ENST00000490248 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
NCOA3-204ENST00000490248 RIOK3O14730 519 aaKnown RBP9.07□□□□□ -0.96
NCOA3-204ENST00000490248 MS4A3Q96HJ5 214 aa9.07□□□□□ -0.96
NCOA3-204ENST00000490248 VGFO15240 615 aaPredicted RBP9.04□□□□□ -0.96
NCOA3-204ENST00000490248 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
NCOA3-204ENST00000490248 TIE1P35590 1138 aa9.03□□□□□ -0.96
NCOA3-204ENST00000490248 PDAP1Q13442 181 aaKnown RBP9.03□□□□□ -0.96
NCOA3-204ENST00000490248 GALR2O43603 387 aaPredicted RBP9.02□□□□□ -0.97
NCOA3-204ENST00000490248 RGL2O15211 777 aa9□□□□□ -0.97
NCOA3-204ENST00000490248 RNF25Q96BH1 459 aaPredicted RBP9□□□□□ -0.97
NCOA3-204ENST00000490248 PCDHB8Q9UN66 801 aa9□□□□□ -0.97
NCOA3-204ENST00000490248 DCBLD2Q96PD2 775 aa8.99□□□□□ -0.97
NCOA3-204ENST00000490248 PSEN1P49768 467 aa8.97□□□□□ -0.97
NCOA3-204ENST00000490248 ASTLQ6HA08 431 aaPredicted RBP8.96□□□□□ -0.98
NCOA3-204ENST00000490248 TMEM106CQ9BVX2 250 aa8.94□□□□□ -0.98
NCOA3-204ENST00000490248 TTLL13PA6NNM8 815 aa8.93□□□□□ -0.98
NCOA3-204ENST00000490248 BMP2KQ9NSY1 1161 aaPredicted RBP8.93□□□□□ -0.98
NCOA3-204ENST00000490248 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
NCOA3-204ENST00000490248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
NCOA3-204ENST00000490248 HS6ST3Q8IZP7 471 aa8.91□□□□□ -0.98
NCOA3-204ENST00000490248 ZFP91Q96JP5 570 aaPredicted RBP8.91□□□□□ -0.98
NCOA3-204ENST00000490248 DCAF8L2P0C7V8 631 aa8.9□□□□□ -0.98
NCOA3-204ENST00000490248 GOLGA2Q08379 1002 aa8.9□□□□□ -0.98
NCOA3-204ENST00000490248 IER5LQ5T953 404 aa8.9□□□□□ -0.98
NCOA3-204ENST00000490248 TRPC6Q9Y210 931 aa8.9□□□□□ -0.98
NCOA3-204ENST00000490248 STK25O00506 426 aa8.89□□□□□ -0.99
NCOA3-204ENST00000490248 SLC39A7Q92504 469 aa8.87□□□□□ -0.99
NCOA3-204ENST00000490248 BCL11BQ9C0K0 894 aaPredicted RBP8.87□□□□□ -0.99
NCOA3-204ENST00000490248 DNAJC5Q9H3Z4 198 aa8.87□□□□□ -0.99
NCOA3-204ENST00000490248 TRIM35Q9UPQ4 493 aa8.87□□□□□ -0.99
NCOA3-204ENST00000490248 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
NCOA3-204ENST00000490248 STK24Q9Y6E0 443 aa8.86□□□□□ -0.99
NCOA3-204ENST00000490248 C7P10643 843 aa8.85□□□□□ -0.99
NCOA3-204ENST00000490248 CHGAP10645 457 aaKnown RBP8.85□□□□□ -0.99
NCOA3-204ENST00000490248 MKRN3Q13064 507 aaKnown RBP8.85□□□□□ -0.99
NCOA3-204ENST00000490248 CABP2Q9NPB3 220 aa8.84□□□□□ -0.99
NCOA3-204ENST00000490248 SOX12O15370 315 aa8.83□□□□□ -1
NCOA3-204ENST00000490248 POTEIP0CG38 1075 aa8.83□□□□□ -1
NCOA3-204ENST00000490248 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
NCOA3-204ENST00000490248 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
NCOA3-204ENST00000490248 METRNQ9UJH8 293 aa8.78□□□□□ -1
NCOA3-204ENST00000490248 PLCG2P16885 1265 aa8.77□□□□□ -1.01
NCOA3-204ENST00000490248 NLRP6P59044 892 aa8.77□□□□□ -1.01
NCOA3-204ENST00000490248 PELP1Q8IZL8 1130 aaKnown RBP8.77□□□□□ -1.01
NCOA3-204ENST00000490248 EFCAB3Q8N7B9 438 aa8.77□□□□□ -1.01
NCOA3-204ENST00000490248 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
NCOA3-204ENST00000490248 SEC24BO95487 1268 aa8.76□□□□□ -1.01
NCOA3-204ENST00000490248 ILDR1Q86SU0 546 aaPredicted RBP8.76□□□□□ -1.01
NCOA3-204ENST00000490248 IRX5P78411 483 aaPredicted RBP8.75□□□□□ -1.01
NCOA3-204ENST00000490248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.75□□□□□ -1.012e-9■■□□□ 14
NCOA3-204ENST00000490248 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
NCOA3-204ENST00000490248 L3MBTL3Q96JM7 780 aaPredicted RBP8.7□□□□□ -1.02
NCOA3-204ENST00000490248 MFRPQ9BY79 579 aa8.7□□□□□ -1.02
NCOA3-204ENST00000490248 PDCD7Q8N8D1 485 aaKnown RBP8.69□□□□□ -1.02
NCOA3-204ENST00000490248 FBXO22Q8NEZ5 403 aa8.69□□□□□ -1.02
NCOA3-204ENST00000490248 PHF8Q9UPP1 1060 aa8.68□□□□□ -1.02
NCOA3-204ENST00000490248 G3V3G9 751 aa8.67□□□□□ -1.02
NCOA3-204ENST00000490248 NKX1-1Q15270 411 aaPredicted RBP8.67□□□□□ -1.02
NCOA3-204ENST00000490248 COLQQ9Y215 455 aaPredicted RBP8.67□□□□□ -1.02
NCOA3-204ENST00000490248 MAMSTRQ6ZN01 415 aa8.66□□□□□ -1.02
NCOA3-204ENST00000490248 POTEFA5A3E0 1075 aa8.65□□□□□ -1.02
NCOA3-204ENST00000490248 SPRYD3Q8NCJ5 442 aa8.65□□□□□ -1.02
NCOA3-204ENST00000490248 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
NCOA3-204ENST00000490248 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
NCOA3-204ENST00000490248 BOLA1Q9Y3E2 137 aa8.61□□□□□ -1.03
NCOA3-204ENST00000490248 SCUBE2Q9NQ36 999 aa8.6□□□□□ -1.03
NCOA3-204ENST00000490248 LHX8Q68G74 356 aa8.59□□□□□ -1.03
NCOA3-204ENST00000490248 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
NCOA3-204ENST00000490248 C3orf67Q6ZVT6 689 aa8.58□□□□□ -1.04
NCOA3-204ENST00000490248 PAXIP1Q6ZW49 1069 aaPredicted RBP8.58□□□□□ -1.04
NCOA3-204ENST00000490248 MICALL2Q8IY33 904 aa8.57□□□□□ -1.04
NCOA3-204ENST00000490248 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
NCOA3-204ENST00000490248 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.56□□□□□ -1.04
NCOA3-204ENST00000490248 PLCB2Q00722 1185 aa8.55□□□□□ -1.04
NCOA3-204ENST00000490248 CFAP44Q96MT7 982 aa8.55□□□□□ -1.04
NCOA3-204ENST00000490248 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
NCOA3-204ENST00000490248 PPP1R37O75864 691 aa8.52□□□□□ -1.05
NCOA3-204ENST00000490248 POTEJP0CG39 1038 aa8.49□□□□□ -1.05
NCOA3-204ENST00000490248 TMC2Q8TDI7 906 aa8.46□□□□□ -1.06
NCOA3-204ENST00000490248 OTUD5Q96G74 571 aa8.46□□□□□ -1.06
NCOA3-204ENST00000490248 SLAIN1Q8ND83 568 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms