RNA–Protein interactions for RNA: ENST00000490222.1

LRRC1-204, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3

Gene LRRC1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-204ENST00000490222 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
LRRC1-204ENST00000490222 CCDC61Q9Y6R9 512 aa15.54■□□□□ 0.08
LRRC1-204ENST00000490222 FAM212AQ96EL1 285 aa15.53■□□□□ 0.08
LRRC1-204ENST00000490222 SPOCK2Q92563 424 aa15.52■□□□□ 0.08
LRRC1-204ENST00000490222 DCAF8Q5TAQ9 597 aa15.44■□□□□ 0.06
LRRC1-204ENST00000490222 GSE1Q14687 1217 aa15.4■□□□□ 0.06
LRRC1-204ENST00000490222 KIF12Q96FN5 646 aa15.4■□□□□ 0.06
LRRC1-204ENST00000490222 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
LRRC1-204ENST00000490222 MAP3K13O43283 966 aa15.34■□□□□ 0.05
LRRC1-204ENST00000490222 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
LRRC1-204ENST00000490222 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
LRRC1-204ENST00000490222 PYGBP11216 843 aa15.28■□□□□ 0.04
LRRC1-204ENST00000490222 SGIP1Q9BQI5 828 aa15.28■□□□□ 0.04
LRRC1-204ENST00000490222 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
LRRC1-204ENST00000490222 DCBLD2Q96PD2 775 aa15.25■□□□□ 0.03
LRRC1-204ENST00000490222 CHRM1P11229 460 aaPredicted RBP15.24■□□□□ 0.03
LRRC1-204ENST00000490222 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
LRRC1-204ENST00000490222 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
LRRC1-204ENST00000490222 TRIM41Q8WV44 630 aa15.18■□□□□ 0.02
LRRC1-204ENST00000490222 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
LRRC1-204ENST00000490222 ASTLQ6HA08 431 aaPredicted RBP15.13■□□□□ 0.01
LRRC1-204ENST00000490222 PCDHB8Q9UN66 801 aa15.12■□□□□ 0.01
LRRC1-204ENST00000490222 TIE1P35590 1138 aa15.11■□□□□ 0.01
LRRC1-204ENST00000490222 ZNF467Q7Z7K2 595 aaPredicted RBP15.11■□□□□ 0.01
LRRC1-204ENST00000490222 ATMINO43313 823 aaPredicted RBP15.1■□□□□ 0.01
LRRC1-204ENST00000490222 BMP2KQ9NSY1 1161 aaPredicted RBP15.1■□□□□ 0.01
LRRC1-204ENST00000490222 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
LRRC1-204ENST00000490222 ATN1P54259 1190 aaPredicted RBP15.04■□□□□ -0
LRRC1-204ENST00000490222 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
LRRC1-204ENST00000490222 PKD2Q13563 968 aa15.03■□□□□ -0
LRRC1-204ENST00000490222 TMEM106CQ9BVX2 250 aa15.01□□□□□ -0.01
LRRC1-204ENST00000490222 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
LRRC1-204ENST00000490222 RNF25Q96BH1 459 aaPredicted RBP14.97□□□□□ -0.01
LRRC1-204ENST00000490222 PDAP1Q13442 181 aaKnown RBP14.96□□□□□ -0.01
LRRC1-204ENST00000490222 PSEN1P49768 467 aa14.95□□□□□ -0.02
LRRC1-204ENST00000490222 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
LRRC1-204ENST00000490222 SLC39A7Q92504 469 aa14.94□□□□□ -0.02
LRRC1-204ENST00000490222 TRIM35Q9UPQ4 493 aa14.93□□□□□ -0.02
LRRC1-204ENST00000490222 C7P10643 843 aa14.92□□□□□ -0.02
LRRC1-204ENST00000490222 METRNQ9UJH8 293 aa14.9□□□□□ -0.02
LRRC1-204ENST00000490222 IER5LQ5T953 404 aa14.86□□□□□ -0.03
LRRC1-204ENST00000490222 RGL2O15211 777 aa14.85□□□□□ -0.03
LRRC1-204ENST00000490222 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
LRRC1-204ENST00000490222 LHX8Q68G74 356 aa14.81□□□□□ -0.04
LRRC1-204ENST00000490222 TAOK2Q9UL54 1235 aa14.8□□□□□ -0.04
LRRC1-204ENST00000490222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.79□□□□□ -0.04
LRRC1-204ENST00000490222 ZFP91Q96JP5 570 aaPredicted RBP14.79□□□□□ -0.04
LRRC1-204ENST00000490222 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
LRRC1-204ENST00000490222 GOLGA2Q08379 1002 aa14.78□□□□□ -0.04
LRRC1-204ENST00000490222 COLQQ9Y215 455 aaPredicted RBP14.76□□□□□ -0.05
LRRC1-204ENST00000490222 SEC24BO95487 1268 aa14.75□□□□□ -0.05
LRRC1-204ENST00000490222 CABP2Q9NPB3 220 aa14.75□□□□□ -0.05
LRRC1-204ENST00000490222 IRX5P78411 483 aaPredicted RBP14.74□□□□□ -0.05
LRRC1-204ENST00000490222 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
LRRC1-204ENST00000490222 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
LRRC1-204ENST00000490222 PLCG2P16885 1265 aa14.69□□□□□ -0.06
LRRC1-204ENST00000490222 OCEL1Q9H607 264 aa14.69□□□□□ -0.06
LRRC1-204ENST00000490222 BCL11BQ9C0K0 894 aaPredicted RBP14.68□□□□□ -0.06
LRRC1-204ENST00000490222 AMER1Q5JTC6 1135 aaPredicted RBP14.67□□□□□ -0.06
LRRC1-204ENST00000490222 STK25O00506 426 aa14.66□□□□□ -0.06
LRRC1-204ENST00000490222 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
LRRC1-204ENST00000490222 ILDR1Q86SU0 546 aaPredicted RBP14.64□□□□□ -0.07
LRRC1-204ENST00000490222 EFCAB3Q8N7B9 438 aa14.64□□□□□ -0.07
LRRC1-204ENST00000490222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.64□□□□□ -0.07
LRRC1-204ENST00000490222 PDCD7Q8N8D1 485 aaKnown RBP14.63□□□□□ -0.07
LRRC1-204ENST00000490222 STK24Q9Y6E0 443 aa14.63□□□□□ -0.07
LRRC1-204ENST00000490222 RTN4Q9NQC3 1192 aaKnown RBP14.6□□□□□ -0.07
LRRC1-204ENST00000490222 SOX12O15370 315 aa14.57□□□□□ -0.08
LRRC1-204ENST00000490222 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
LRRC1-204ENST00000490222 HS6ST3Q8IZP7 471 aa14.56□□□□□ -0.08
LRRC1-204ENST00000490222 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
LRRC1-204ENST00000490222 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
LRRC1-204ENST00000490222 SCUBE2Q9NQ36 999 aa14.5□□□□□ -0.09
LRRC1-204ENST00000490222 PHF8Q9UPP1 1060 aa14.5□□□□□ -0.09
LRRC1-204ENST00000490222 DPY19L2Q6NUT2 758 aa14.49□□□□□ -0.09
LRRC1-204ENST00000490222 L3MBTL3Q96JM7 780 aaPredicted RBP14.48□□□□□ -0.09
LRRC1-204ENST00000490222 DCAF8L2P0C7V8 631 aa14.46□□□□□ -0.09
LRRC1-204ENST00000490222 NLRP6P59044 892 aa14.46□□□□□ -0.09
LRRC1-204ENST00000490222 MS4A4AQ96JQ5 239 aa14.46□□□□□ -0.09
LRRC1-204ENST00000490222 MFRPQ9BY79 579 aa14.46□□□□□ -0.09
LRRC1-204ENST00000490222 FBXO22Q8NEZ5 403 aa14.45□□□□□ -0.1
LRRC1-204ENST00000490222 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
LRRC1-204ENST00000490222 BOLA1Q9Y3E2 137 aa14.4□□□□□ -0.1
LRRC1-204ENST00000490222 G3V3G9 751 aa14.37□□□□□ -0.11
LRRC1-204ENST00000490222 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
LRRC1-204ENST00000490222 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
LRRC1-204ENST00000490222 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
LRRC1-204ENST00000490222 NKX1-1Q15270 411 aaPredicted RBP14.34□□□□□ -0.11
LRRC1-204ENST00000490222 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
LRRC1-204ENST00000490222 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
LRRC1-204ENST00000490222 RYDENQ9NUL5 291 aaKnown RBP14.25□□□□□ -0.13
LRRC1-204ENST00000490222 PPP1R37O75864 691 aa14.23□□□□□ -0.13
LRRC1-204ENST00000490222 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
LRRC1-204ENST00000490222 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
LRRC1-204ENST00000490222 TMEM92Q6UXU6 159 aa14.15□□□□□ -0.14
LRRC1-204ENST00000490222 SNPHO15079 494 aa14.1□□□□□ -0.15
LRRC1-204ENST00000490222 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
LRRC1-204ENST00000490222 LCE2DQ5TA82 110 aaPredicted RBP14.06□□□□□ -0.16
LRRC1-204ENST00000490222 KIF3CO14782 793 aa14.04□□□□□ -0.16
LRRC1-204ENST00000490222 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms