RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
TM9SF3-206ENST00000490192 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
TM9SF3-206ENST00000490192 RASEFQ8IZ41 740 aa14.14□□□□□ -0.15
TM9SF3-206ENST00000490192 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
TM9SF3-206ENST00000490192 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
TM9SF3-206ENST00000490192 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
TM9SF3-206ENST00000490192 NUBP1P53384 320 aa14.1□□□□□ -0.15
TM9SF3-206ENST00000490192 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
TM9SF3-206ENST00000490192 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
TM9SF3-206ENST00000490192 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
TM9SF3-206ENST00000490192 IFNLR1Q8IU57 520 aaPredicted RBP14.04□□□□□ -0.16
TM9SF3-206ENST00000490192 GALR2O43603 387 aaPredicted RBP14.03□□□□□ -0.16
TM9SF3-206ENST00000490192 BCANQ96GW7 911 aa14.03□□□□□ -0.16
TM9SF3-206ENST00000490192 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
TM9SF3-206ENST00000490192 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
TM9SF3-206ENST00000490192 GSE1Q14687 1217 aa13.97□□□□□ -0.17
TM9SF3-206ENST00000490192 PRKCSHP14314 528 aaPredicted RBP13.96□□□□□ -0.17
TM9SF3-206ENST00000490192 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
TM9SF3-206ENST00000490192 PKD2Q13563 968 aa13.95□□□□□ -0.18
TM9SF3-206ENST00000490192 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
TM9SF3-206ENST00000490192 MAP3K13O43283 966 aa13.93□□□□□ -0.18
TM9SF3-206ENST00000490192 SGIP1Q9BQI5 828 aa13.89□□□□□ -0.19
TM9SF3-206ENST00000490192 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
TM9SF3-206ENST00000490192 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
TM9SF3-206ENST00000490192 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
TM9SF3-206ENST00000490192 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
TM9SF3-206ENST00000490192 PYGBP11216 843 aa13.86□□□□□ -0.19
TM9SF3-206ENST00000490192 TIE1P35590 1138 aa13.77□□□□□ -0.21
TM9SF3-206ENST00000490192 ASTLQ6HA08 431 aaPredicted RBP13.77□□□□□ -0.21
TM9SF3-206ENST00000490192 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
TM9SF3-206ENST00000490192 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
TM9SF3-206ENST00000490192 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.76□□□□□ -0.21
TM9SF3-206ENST00000490192 CHRM1P11229 460 aaPredicted RBP13.74□□□□□ -0.21
TM9SF3-206ENST00000490192 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
TM9SF3-206ENST00000490192 KDM2AQ9Y2K7 1162 aa13.74□□□□□ -0.21
TM9SF3-206ENST00000490192 TRPC6Q9Y210 931 aa13.73□□□□□ -0.21
TM9SF3-206ENST00000490192 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
TM9SF3-206ENST00000490192 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
TM9SF3-206ENST00000490192 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
TM9SF3-206ENST00000490192 LHX8Q68G74 356 aa13.7□□□□□ -0.22
TM9SF3-206ENST00000490192 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
TM9SF3-206ENST00000490192 TRIM41Q8WV44 630 aa13.7□□□□□ -0.22
TM9SF3-206ENST00000490192 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
TM9SF3-206ENST00000490192 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
TM9SF3-206ENST00000490192 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
TM9SF3-206ENST00000490192 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
TM9SF3-206ENST00000490192 C7P10643 843 aa13.68□□□□□ -0.22
TM9SF3-206ENST00000490192 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
TM9SF3-206ENST00000490192 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
TM9SF3-206ENST00000490192 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
TM9SF3-206ENST00000490192 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
TM9SF3-206ENST00000490192 METRNQ9UJH8 293 aa13.64□□□□□ -0.23
TM9SF3-206ENST00000490192 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
TM9SF3-206ENST00000490192 SEC24BO95487 1268 aa13.58□□□□□ -0.24
TM9SF3-206ENST00000490192 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
TM9SF3-206ENST00000490192 PSEN1P49768 467 aa13.55□□□□□ -0.24
TM9SF3-206ENST00000490192 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
TM9SF3-206ENST00000490192 IER5LQ5T953 404 aa13.54□□□□□ -0.24
TM9SF3-206ENST00000490192 RGL2O15211 777 aa13.53□□□□□ -0.24
TM9SF3-206ENST00000490192 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
TM9SF3-206ENST00000490192 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
TM9SF3-206ENST00000490192 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
TM9SF3-206ENST00000490192 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
TM9SF3-206ENST00000490192 PLCG2P16885 1265 aa13.45□□□□□ -0.26
TM9SF3-206ENST00000490192 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
TM9SF3-206ENST00000490192 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
TM9SF3-206ENST00000490192 COLQQ9Y215 455 aaPredicted RBP13.42□□□□□ -0.26
TM9SF3-206ENST00000490192 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
TM9SF3-206ENST00000490192 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
TM9SF3-206ENST00000490192 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
TM9SF3-206ENST00000490192 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
TM9SF3-206ENST00000490192 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
TM9SF3-206ENST00000490192 SCUBE2Q9NQ36 999 aa13.38□□□□□ -0.27
TM9SF3-206ENST00000490192 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
TM9SF3-206ENST00000490192 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
TM9SF3-206ENST00000490192 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
TM9SF3-206ENST00000490192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.272e-7■■□□□ 13.2
TM9SF3-206ENST00000490192 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
TM9SF3-206ENST00000490192 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
TM9SF3-206ENST00000490192 POTEJP0CG39 1038 aa13.3□□□□□ -0.28
TM9SF3-206ENST00000490192 NBR1Q14596 966 aa13.29□□□□□ -0.28
TM9SF3-206ENST00000490192 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
TM9SF3-206ENST00000490192 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
TM9SF3-206ENST00000490192 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
TM9SF3-206ENST00000490192 STK25O00506 426 aa13.23□□□□□ -0.29
TM9SF3-206ENST00000490192 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
TM9SF3-206ENST00000490192 G3V3G9 751 aa13.22□□□□□ -0.29
TM9SF3-206ENST00000490192 PDCD7Q8N8D1 485 aaKnown RBP13.22□□□□□ -0.29
TM9SF3-206ENST00000490192 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
TM9SF3-206ENST00000490192 SOX12O15370 315 aa13.2□□□□□ -0.3
TM9SF3-206ENST00000490192 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
TM9SF3-206ENST00000490192 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.17□□□□□ -0.3
TM9SF3-206ENST00000490192 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
TM9SF3-206ENST00000490192 ILDR1Q86SU0 546 aaPredicted RBP13.16□□□□□ -0.3
TM9SF3-206ENST00000490192 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
TM9SF3-206ENST00000490192 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
TM9SF3-206ENST00000490192 NLRP6P59044 892 aa13.1□□□□□ -0.31
TM9SF3-206ENST00000490192 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
TM9SF3-206ENST00000490192 TIMELESSQ9UNS1 1208 aa13.09□□□□□ -0.31
TM9SF3-206ENST00000490192 PHF8Q9UPP1 1060 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms