RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZRANB1Q9UGI0 708 aa15.05■□□□□ -0
CCDC39-206ENST00000489868 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
CCDC39-206ENST00000489868 GSE1Q14687 1217 aa15.03■□□□□ -0
CCDC39-206ENST00000489868 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
CCDC39-206ENST00000489868 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
CCDC39-206ENST00000489868 PHF12Q96QT6 1004 aa14.97□□□□□ -0.01
CCDC39-206ENST00000489868 PYGBP11216 843 aa14.96□□□□□ -0.01
CCDC39-206ENST00000489868 ZNF579Q8NAF0 562 aaKnown RBP14.95□□□□□ -0.02
CCDC39-206ENST00000489868 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
CCDC39-206ENST00000489868 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
CCDC39-206ENST00000489868 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
CCDC39-206ENST00000489868 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
CCDC39-206ENST00000489868 MAP3K13O43283 966 aa14.85□□□□□ -0.03
CCDC39-206ENST00000489868 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
CCDC39-206ENST00000489868 RGL2O15211 777 aa14.83□□□□□ -0.04
CCDC39-206ENST00000489868 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
CCDC39-206ENST00000489868 IFNL1Q8IU54 200 aa14.77□□□□□ -0.05
CCDC39-206ENST00000489868 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
CCDC39-206ENST00000489868 PCDHB13Q9Y5F0 798 aa14.77□□□□□ -0.05
CCDC39-206ENST00000489868 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
CCDC39-206ENST00000489868 PCDHB8Q9UN66 801 aa14.76□□□□□ -0.05
CCDC39-206ENST00000489868 GABBR2O75899 941 aa14.75□□□□□ -0.05
CCDC39-206ENST00000489868 SGIP1Q9BQI5 828 aa14.73□□□□□ -0.05
CCDC39-206ENST00000489868 TRPC6Q9Y210 931 aa14.72□□□□□ -0.05
CCDC39-206ENST00000489868 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
CCDC39-206ENST00000489868 ZNF467Q7Z7K2 595 aaPredicted RBP14.67□□□□□ -0.06
CCDC39-206ENST00000489868 CLCN6P51797 869 aa14.64□□□□□ -0.07
CCDC39-206ENST00000489868 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
CCDC39-206ENST00000489868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.58□□□□□ -0.08
CCDC39-206ENST00000489868 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
CCDC39-206ENST00000489868 ZFP91Q96JP5 570 aaPredicted RBP14.58□□□□□ -0.08
CCDC39-206ENST00000489868 PSEN1P49768 467 aa14.57□□□□□ -0.08
CCDC39-206ENST00000489868 PDAP1Q13442 181 aaKnown RBP14.57□□□□□ -0.08
CCDC39-206ENST00000489868 BMP2KQ9NSY1 1161 aaPredicted RBP14.55□□□□□ -0.08
CCDC39-206ENST00000489868 TTLL13PA6NNM8 815 aa14.52□□□□□ -0.09
CCDC39-206ENST00000489868 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
CCDC39-206ENST00000489868 TIE1P35590 1138 aa14.52□□□□□ -0.09
CCDC39-206ENST00000489868 TMEM106CQ9BVX2 250 aa14.51□□□□□ -0.09
CCDC39-206ENST00000489868 ATMINO43313 823 aaPredicted RBP14.48□□□□□ -0.09
CCDC39-206ENST00000489868 CHGAP10645 457 aaKnown RBP14.48□□□□□ -0.09
CCDC39-206ENST00000489868 ASTLQ6HA08 431 aaPredicted RBP14.48□□□□□ -0.09
CCDC39-206ENST00000489868 BCL11BQ9C0K0 894 aaPredicted RBP14.48□□□□□ -0.09
CCDC39-206ENST00000489868 STK25O00506 426 aa14.47□□□□□ -0.09
CCDC39-206ENST00000489868 TAOK2Q9UL54 1235 aa14.47□□□□□ -0.09
CCDC39-206ENST00000489868 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
CCDC39-206ENST00000489868 HS6ST3Q8IZP7 471 aa14.46□□□□□ -0.09
CCDC39-206ENST00000489868 DCBLD2Q96PD2 775 aa14.45□□□□□ -0.1
CCDC39-206ENST00000489868 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
CCDC39-206ENST00000489868 STK24Q9Y6E0 443 aa14.43□□□□□ -0.1
CCDC39-206ENST00000489868 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
CCDC39-206ENST00000489868 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
CCDC39-206ENST00000489868 NKX1-1Q15270 411 aaPredicted RBP14.35□□□□□ -0.11
CCDC39-206ENST00000489868 EFCAB3Q8N7B9 438 aa14.35□□□□□ -0.11
CCDC39-206ENST00000489868 DNAJC5Q9H3Z4 198 aa14.33□□□□□ -0.12
CCDC39-206ENST00000489868 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
CCDC39-206ENST00000489868 BBXQ8WY36 941 aaPredicted RBP14.26□□□□□ -0.13
CCDC39-206ENST00000489868 MFRPQ9BY79 579 aa14.25□□□□□ -0.13
CCDC39-206ENST00000489868 MKRN3Q13064 507 aaKnown RBP14.24□□□□□ -0.13
CCDC39-206ENST00000489868 POTEFA5A3E0 1075 aa14.23□□□□□ -0.13
CCDC39-206ENST00000489868 PHF8Q9UPP1 1060 aa14.23□□□□□ -0.13
CCDC39-206ENST00000489868 IRX5P78411 483 aaPredicted RBP14.22□□□□□ -0.13
CCDC39-206ENST00000489868 IER5LQ5T953 404 aa14.22□□□□□ -0.13
CCDC39-206ENST00000489868 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
CCDC39-206ENST00000489868 SLC39A7Q92504 469 aa14.22□□□□□ -0.13
CCDC39-206ENST00000489868 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
CCDC39-206ENST00000489868 METRNQ9UJH8 293 aa14.21□□□□□ -0.13
CCDC39-206ENST00000489868 SOX12O15370 315 aa14.2□□□□□ -0.14
CCDC39-206ENST00000489868 FBXO22Q8NEZ5 403 aa14.2□□□□□ -0.14
CCDC39-206ENST00000489868 C7P10643 843 aa14.19□□□□□ -0.14
CCDC39-206ENST00000489868 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
CCDC39-206ENST00000489868 PDCD7Q8N8D1 485 aaKnown RBP14.18□□□□□ -0.14
CCDC39-206ENST00000489868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCDC39-206ENST00000489868 GTPBP6O43824 516 aaPredicted RBP14.16□□□□□ -0.14
CCDC39-206ENST00000489868 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
CCDC39-206ENST00000489868 NLRP6P59044 892 aa14.13□□□□□ -0.15
CCDC39-206ENST00000489868 OCEL1Q9H607 264 aa14.13□□□□□ -0.15
CCDC39-206ENST00000489868 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
CCDC39-206ENST00000489868 SEC24BO95487 1268 aa14.1□□□□□ -0.15
CCDC39-206ENST00000489868 PPP1R37O75864 691 aa14.09□□□□□ -0.15
CCDC39-206ENST00000489868 PLCG2P16885 1265 aa14.09□□□□□ -0.15
CCDC39-206ENST00000489868 PAXIP1Q6ZW49 1069 aaPredicted RBP14.09□□□□□ -0.15
CCDC39-206ENST00000489868 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
CCDC39-206ENST00000489868 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
CCDC39-206ENST00000489868 SPRYD3Q8NCJ5 442 aa14.05□□□□□ -0.16
CCDC39-206ENST00000489868 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
CCDC39-206ENST00000489868 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
CCDC39-206ENST00000489868 RYDENQ9NUL5 291 aaKnown RBP13.99□□□□□ -0.17
CCDC39-206ENST00000489868 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
CCDC39-206ENST00000489868 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CCDC39-206ENST00000489868 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
CCDC39-206ENST00000489868 L3MBTL3Q96JM7 780 aaPredicted RBP13.89□□□□□ -0.19
CCDC39-206ENST00000489868 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
CCDC39-206ENST00000489868 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
CCDC39-206ENST00000489868 LHX8Q68G74 356 aa13.86□□□□□ -0.19
CCDC39-206ENST00000489868 TMEM92Q6UXU6 159 aa13.81□□□□□ -0.2
CCDC39-206ENST00000489868 G3V3G9 751 aa13.8□□□□□ -0.2
CCDC39-206ENST00000489868 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
CCDC39-206ENST00000489868 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
CCDC39-206ENST00000489868 C3orf67Q6ZVT6 689 aa13.77□□□□□ -0.21
CCDC39-206ENST00000489868 NCKAP5LQ9HCH0 1330 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms