RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ECM2O94769 699 aaPredicted RBP14.79□□□□□ -0.04
VPS26A-206ENST00000489794 FAM212AQ96EL1 285 aa14.79□□□□□ -0.04
VPS26A-206ENST00000489794 GABBR2O75899 941 aa14.76□□□□□ -0.05
VPS26A-206ENST00000489794 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
VPS26A-206ENST00000489794 CLCN6P51797 869 aa14.72□□□□□ -0.05
VPS26A-206ENST00000489794 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
VPS26A-206ENST00000489794 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
VPS26A-206ENST00000489794 PAK3O75914 559 aaPredicted RBP14.65□□□□□ -0.06
VPS26A-206ENST00000489794 DCAF8L2P0C7V8 631 aa14.65□□□□□ -0.06
VPS26A-206ENST00000489794 ZNF579Q8NAF0 562 aaKnown RBP14.62□□□□□ -0.07
VPS26A-206ENST00000489794 CHRM1P11229 460 aaPredicted RBP14.6□□□□□ -0.07
VPS26A-206ENST00000489794 TAOK2Q9UL54 1235 aa14.58□□□□□ -0.08
VPS26A-206ENST00000489794 RGL2O15211 777 aa14.57□□□□□ -0.08
VPS26A-206ENST00000489794 LHX8Q68G74 356 aa14.54□□□□□ -0.08
VPS26A-206ENST00000489794 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
VPS26A-206ENST00000489794 RIOK3O14730 519 aaKnown RBP14.48□□□□□ -0.09
VPS26A-206ENST00000489794 PYGBP11216 843 aa14.46□□□□□ -0.09
VPS26A-206ENST00000489794 DCBLD2Q96PD2 775 aa14.46□□□□□ -0.09
VPS26A-206ENST00000489794 CCDC61Q9Y6R9 512 aa14.44□□□□□ -0.1
VPS26A-206ENST00000489794 RNF25Q96BH1 459 aaPredicted RBP14.43□□□□□ -0.1
VPS26A-206ENST00000489794 PHF12Q96QT6 1004 aa14.43□□□□□ -0.1
VPS26A-206ENST00000489794 VGFO15240 615 aaPredicted RBP14.41□□□□□ -0.1
VPS26A-206ENST00000489794 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
VPS26A-206ENST00000489794 ZNF467Q7Z7K2 595 aaPredicted RBP14.4□□□□□ -0.1
VPS26A-206ENST00000489794 GALR2O43603 387 aaPredicted RBP14.39□□□□□ -0.11
VPS26A-206ENST00000489794 BBXQ8WY36 941 aaPredicted RBP14.39□□□□□ -0.11
VPS26A-206ENST00000489794 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
VPS26A-206ENST00000489794 CHGAP10645 457 aaKnown RBP14.37□□□□□ -0.11
VPS26A-206ENST00000489794 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
VPS26A-206ENST00000489794 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.37□□□□□ -0.11
VPS26A-206ENST00000489794 HS6ST3Q8IZP7 471 aa14.36□□□□□ -0.11
VPS26A-206ENST00000489794 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
VPS26A-206ENST00000489794 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
VPS26A-206ENST00000489794 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
VPS26A-206ENST00000489794 PCDHB13Q9Y5F0 798 aa14.28□□□□□ -0.12
VPS26A-206ENST00000489794 STK25O00506 426 aa14.27□□□□□ -0.13
VPS26A-206ENST00000489794 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
VPS26A-206ENST00000489794 MS4A3Q96HJ5 214 aa14.24□□□□□ -0.13
VPS26A-206ENST00000489794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
VPS26A-206ENST00000489794 MAP3K13O43283 966 aa14.23□□□□□ -0.13
VPS26A-206ENST00000489794 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
VPS26A-206ENST00000489794 PCDHB8Q9UN66 801 aa14.21□□□□□ -0.13
VPS26A-206ENST00000489794 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
VPS26A-206ENST00000489794 IFNL1Q8IU54 200 aa14.18□□□□□ -0.14
VPS26A-206ENST00000489794 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
VPS26A-206ENST00000489794 STK24Q9Y6E0 443 aa14.18□□□□□ -0.14
VPS26A-206ENST00000489794 PSEN1P49768 467 aa14.17□□□□□ -0.14
VPS26A-206ENST00000489794 ASTLQ6HA08 431 aaPredicted RBP14.15□□□□□ -0.14
VPS26A-206ENST00000489794 RYDENQ9NUL5 291 aaKnown RBP14.15□□□□□ -0.14
VPS26A-206ENST00000489794 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
VPS26A-206ENST00000489794 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
VPS26A-206ENST00000489794 CFAP44Q96MT7 982 aa14.11□□□□□ -0.15
VPS26A-206ENST00000489794 PELP1Q8IZL8 1130 aaKnown RBP14.08□□□□□ -0.16
VPS26A-206ENST00000489794 HAP1P54257 671 aaPredicted RBP14.06□□□□□ -0.16
VPS26A-206ENST00000489794 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
VPS26A-206ENST00000489794 C7P10643 843 aa14.05□□□□□ -0.16
VPS26A-206ENST00000489794 TIE1P35590 1138 aa14.04□□□□□ -0.16
VPS26A-206ENST00000489794 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
VPS26A-206ENST00000489794 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
VPS26A-206ENST00000489794 BMP2KQ9NSY1 1161 aaPredicted RBP14.01□□□□□ -0.17
VPS26A-206ENST00000489794 METRNQ9UJH8 293 aa14□□□□□ -0.17
VPS26A-206ENST00000489794 TRPC6Q9Y210 931 aa14□□□□□ -0.17
VPS26A-206ENST00000489794 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
VPS26A-206ENST00000489794 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
VPS26A-206ENST00000489794 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
VPS26A-206ENST00000489794 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
VPS26A-206ENST00000489794 SOX12O15370 315 aa13.95□□□□□ -0.18
VPS26A-206ENST00000489794 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
VPS26A-206ENST00000489794 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
VPS26A-206ENST00000489794 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
VPS26A-206ENST00000489794 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
VPS26A-206ENST00000489794 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
VPS26A-206ENST00000489794 NLRP6P59044 892 aa13.9□□□□□ -0.18
VPS26A-206ENST00000489794 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
VPS26A-206ENST00000489794 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
VPS26A-206ENST00000489794 MFRPQ9BY79 579 aa13.87□□□□□ -0.19
VPS26A-206ENST00000489794 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
VPS26A-206ENST00000489794 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
VPS26A-206ENST00000489794 IER5LQ5T953 404 aa13.83□□□□□ -0.2
VPS26A-206ENST00000489794 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
VPS26A-206ENST00000489794 SEC24BO95487 1268 aa13.82□□□□□ -0.2
VPS26A-206ENST00000489794 FBXO22Q8NEZ5 403 aa13.81□□□□□ -0.2
VPS26A-206ENST00000489794 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
VPS26A-206ENST00000489794 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
VPS26A-206ENST00000489794 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
VPS26A-206ENST00000489794 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
VPS26A-206ENST00000489794 COLQQ9Y215 455 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-206ENST00000489794 POTEMA6NI47 508 aa13.72□□□□□ -0.21
VPS26A-206ENST00000489794 ILDR1Q86SU0 546 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-206ENST00000489794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
VPS26A-206ENST00000489794 KDM2AQ9Y2K7 1162 aa13.69□□□□□ -0.22
VPS26A-206ENST00000489794 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
VPS26A-206ENST00000489794 PLCG2P16885 1265 aa13.67□□□□□ -0.22
VPS26A-206ENST00000489794 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
VPS26A-206ENST00000489794 PPP1R37O75864 691 aa13.64□□□□□ -0.23
VPS26A-206ENST00000489794 OCEL1Q9H607 264 aa13.64□□□□□ -0.23
VPS26A-206ENST00000489794 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-206ENST00000489794 PDCD7Q8N8D1 485 aaKnown RBP13.57□□□□□ -0.24
VPS26A-206ENST00000489794 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
VPS26A-206ENST00000489794 G3V3G9 751 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms