RNA–Protein interactions for RNA: ENST00000489779.1

ACTR3-207, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 2

Gene ACTR3, Length 545 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-207ENST00000489779 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
ACTR3-207ENST00000489779 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
ACTR3-207ENST00000489779 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
ACTR3-207ENST00000489779 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
ACTR3-207ENST00000489779 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
ACTR3-207ENST00000489779 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
ACTR3-207ENST00000489779 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
ACTR3-207ENST00000489779 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
ACTR3-207ENST00000489779 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
ACTR3-207ENST00000489779 C7P10643 843 aa12.09□□□□□ -0.47
ACTR3-207ENST00000489779 RASEFQ8IZ41 740 aa12.09□□□□□ -0.47
ACTR3-207ENST00000489779 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
ACTR3-207ENST00000489779 NUBP1P53384 320 aa12.06□□□□□ -0.48
ACTR3-207ENST00000489779 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
ACTR3-207ENST00000489779 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
ACTR3-207ENST00000489779 ATN1P54259 1190 aaPredicted RBP12.01□□□□□ -0.49
ACTR3-207ENST00000489779 POTEJP0CG39 1038 aa12□□□□□ -0.49
ACTR3-207ENST00000489779 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
ACTR3-207ENST00000489779 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
ACTR3-207ENST00000489779 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
ACTR3-207ENST00000489779 MAP3K13O43283 966 aa11.97□□□□□ -0.49
ACTR3-207ENST00000489779 TIE1P35590 1138 aa11.96□□□□□ -0.49
ACTR3-207ENST00000489779 TRPC6Q9Y210 931 aa11.95□□□□□ -0.5
ACTR3-207ENST00000489779 POTEMA6NI47 508 aa11.94□□□□□ -0.5
ACTR3-207ENST00000489779 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
ACTR3-207ENST00000489779 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
ACTR3-207ENST00000489779 POTEGQ6S5H5 508 aa11.9□□□□□ -0.5
ACTR3-207ENST00000489779 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
ACTR3-207ENST00000489779 SCUBE2Q9NQ36 999 aa11.89□□□□□ -0.51
ACTR3-207ENST00000489779 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
ACTR3-207ENST00000489779 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
ACTR3-207ENST00000489779 TTLL13PA6NNM8 815 aa11.87□□□□□ -0.51
ACTR3-207ENST00000489779 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
ACTR3-207ENST00000489779 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
ACTR3-207ENST00000489779 IER5LQ5T953 404 aa11.81□□□□□ -0.52
ACTR3-207ENST00000489779 PCDH10Q9P2E7 1040 aa11.81□□□□□ -0.52
ACTR3-207ENST00000489779 PYGBP11216 843 aa11.8□□□□□ -0.52
ACTR3-207ENST00000489779 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
ACTR3-207ENST00000489779 TRIM35Q9UPQ4 493 aa11.79□□□□□ -0.52
ACTR3-207ENST00000489779 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
ACTR3-207ENST00000489779 SEC24BO95487 1268 aa11.76□□□□□ -0.53
ACTR3-207ENST00000489779 GSE1Q14687 1217 aa11.75□□□□□ -0.53
ACTR3-207ENST00000489779 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
ACTR3-207ENST00000489779 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
ACTR3-207ENST00000489779 FAM163AQ96GL9 167 aaPredicted RBP11.71□□□□□ -0.53
ACTR3-207ENST00000489779 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
ACTR3-207ENST00000489779 TMEM106CQ9BVX2 250 aa11.68□□□□□ -0.54
ACTR3-207ENST00000489779 CHRM1P11229 460 aaPredicted RBP11.65□□□□□ -0.54
ACTR3-207ENST00000489779 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
ACTR3-207ENST00000489779 PLCG2P16885 1265 aa11.62□□□□□ -0.55
ACTR3-207ENST00000489779 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
ACTR3-207ENST00000489779 ZNF467Q7Z7K2 595 aaPredicted RBP11.55□□□□□ -0.56
ACTR3-207ENST00000489779 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
ACTR3-207ENST00000489779 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
ACTR3-207ENST00000489779 ST18O60284 1047 aa11.5□□□□□ -0.57
ACTR3-207ENST00000489779 PSEN1P49768 467 aa11.5□□□□□ -0.57
ACTR3-207ENST00000489779 PKD2Q13563 968 aa11.5□□□□□ -0.57
ACTR3-207ENST00000489779 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
ACTR3-207ENST00000489779 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
ACTR3-207ENST00000489779 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
ACTR3-207ENST00000489779 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.44□□□□□ -0.58
ACTR3-207ENST00000489779 TMEM121BQ9BXQ6 578 aaPredicted RBP11.43□□□□□ -0.58
ACTR3-207ENST00000489779 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
ACTR3-207ENST00000489779 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
ACTR3-207ENST00000489779 RIOK3O14730 519 aaKnown RBP11.41□□□□□ -0.58
ACTR3-207ENST00000489779 SNPHO15079 494 aa11.4□□□□□ -0.58
ACTR3-207ENST00000489779 RGL2O15211 777 aa11.38□□□□□ -0.59
ACTR3-207ENST00000489779 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
ACTR3-207ENST00000489779 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
ACTR3-207ENST00000489779 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.36□□□□□ -0.59
ACTR3-207ENST00000489779 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
ACTR3-207ENST00000489779 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
ACTR3-207ENST00000489779 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
ACTR3-207ENST00000489779 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
ACTR3-207ENST00000489779 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
ACTR3-207ENST00000489779 ILDR1Q86SU0 546 aaPredicted RBP11.33□□□□□ -0.6
ACTR3-207ENST00000489779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.31□□□□□ -0.61e-7■■■□□ 16.6
ACTR3-207ENST00000489779 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
ACTR3-207ENST00000489779 DPY19L2Q6NUT2 758 aa11.26□□□□□ -0.61
ACTR3-207ENST00000489779 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
ACTR3-207ENST00000489779 BCL11BQ9C0K0 894 aaPredicted RBP11.24□□□□□ -0.61
ACTR3-207ENST00000489779 SPNS2Q8IVW8 549 aa11.22□□□□□ -0.61
ACTR3-207ENST00000489779 STK24Q9Y6E0 443 aa11.22□□□□□ -0.61
ACTR3-207ENST00000489779 MMRN1Q13201 1228 aa11.21□□□□□ -0.61
ACTR3-207ENST00000489779 STK25O00506 426 aa11.2□□□□□ -0.62
ACTR3-207ENST00000489779 EMP3P54852 163 aa11.19□□□□□ -0.62
ACTR3-207ENST00000489779 TAOK2Q9UL54 1235 aa11.18□□□□□ -0.62
ACTR3-207ENST00000489779 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
ACTR3-207ENST00000489779 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
ACTR3-207ENST00000489779 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
ACTR3-207ENST00000489779 SOX12O15370 315 aa11.14□□□□□ -0.63
ACTR3-207ENST00000489779 G3V3G9 751 aa11.13□□□□□ -0.63
ACTR3-207ENST00000489779 HS3ST6Q96QI5 342 aa11.13□□□□□ -0.63
ACTR3-207ENST00000489779 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
ACTR3-207ENST00000489779 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
ACTR3-207ENST00000489779 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
ACTR3-207ENST00000489779 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
ACTR3-207ENST00000489779 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
ACTR3-207ENST00000489779 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
ACTR3-207ENST00000489779 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms