RNA–Protein interactions for RNA: ENST00000489196.1

CASD1-206, Transcript of CAS1 domain containing 1, humanhuman

TSL 3

Gene CASD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-206ENST00000489196 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
CASD1-206ENST00000489196 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
CASD1-206ENST00000489196 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
CASD1-206ENST00000489196 SCUBE2Q9NQ36 999 aa9.05□□□□□ -0.96
CASD1-206ENST00000489196 ATMINO43313 823 aaPredicted RBP9.04□□□□□ -0.96
CASD1-206ENST00000489196 PROM2Q8N271 834 aa9.03□□□□□ -0.96
CASD1-206ENST00000489196 MS4A3Q96HJ5 214 aa9□□□□□ -0.97
CASD1-206ENST00000489196 MNX1P50219 401 aaPredicted RBP8.99□□□□□ -0.97
CASD1-206ENST00000489196 FAM163AQ96GL9 167 aaPredicted RBP8.96□□□□□ -0.98
CASD1-206ENST00000489196 POTEJP0CG39 1038 aa8.93□□□□□ -0.98
CASD1-206ENST00000489196 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
CASD1-206ENST00000489196 LCE2DQ5TA82 110 aaPredicted RBP8.89□□□□□ -0.99
CASD1-206ENST00000489196 ATN1P54259 1190 aaPredicted RBP8.89□□□□□ -0.99
CASD1-206ENST00000489196 MIER1Q8N108 512 aa8.89□□□□□ -0.99
CASD1-206ENST00000489196 TIE1P35590 1138 aa8.88□□□□□ -0.99
CASD1-206ENST00000489196 CCDC61Q9Y6R9 512 aa8.86□□□□□ -0.99
CASD1-206ENST00000489196 KIF12Q96FN5 646 aa8.86□□□□□ -0.99
CASD1-206ENST00000489196 TSPYL2Q9H2G4 693 aaPredicted RBP8.85□□□□□ -0.99
CASD1-206ENST00000489196 BMP2KQ9NSY1 1161 aaPredicted RBP8.83□□□□□ -1
CASD1-206ENST00000489196 FKBP8Q14318 412 aa8.82□□□□□ -1
CASD1-206ENST00000489196 IER5LQ5T953 404 aa8.82□□□□□ -1
CASD1-206ENST00000489196 PLCD3Q8N3E9 789 aa8.82□□□□□ -1
CASD1-206ENST00000489196 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
CASD1-206ENST00000489196 SEC24BO95487 1268 aa8.8□□□□□ -1
CASD1-206ENST00000489196 POTEFA5A3E0 1075 aa8.79□□□□□ -1
CASD1-206ENST00000489196 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
CASD1-206ENST00000489196 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
CASD1-206ENST00000489196 RASEFQ8IZ41 740 aa8.74□□□□□ -1.01
CASD1-206ENST00000489196 MAP3K13O43283 966 aa8.73□□□□□ -1.01
CASD1-206ENST00000489196 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
CASD1-206ENST00000489196 COLQQ9Y215 455 aaPredicted RBP8.7□□□□□ -1.02
CASD1-206ENST00000489196 SLAIN1Q8ND83 568 aa8.69□□□□□ -1.02
CASD1-206ENST00000489196 TMEM121BQ9BXQ6 578 aaPredicted RBP8.69□□□□□ -1.02
CASD1-206ENST00000489196 FBXO3Q9UK99 471 aa8.69□□□□□ -1.02
CASD1-206ENST00000489196 TRPC6Q9Y210 931 aa8.69□□□□□ -1.02
CASD1-206ENST00000489196 SNPHO15079 494 aa8.68□□□□□ -1.02
CASD1-206ENST00000489196 NUBP1P53384 320 aa8.67□□□□□ -1.02
CASD1-206ENST00000489196 TRIM35Q9UPQ4 493 aa8.67□□□□□ -1.02
CASD1-206ENST00000489196 ST18O60284 1047 aa8.66□□□□□ -1.02
CASD1-206ENST00000489196 PLCG2P16885 1265 aa8.65□□□□□ -1.03
CASD1-206ENST00000489196 FAM212AQ96EL1 285 aa8.65□□□□□ -1.03
CASD1-206ENST00000489196 PCDHB13Q9Y5F0 798 aa8.63□□□□□ -1.03
CASD1-206ENST00000489196 MMRN1Q13201 1228 aa8.62□□□□□ -1.03
CASD1-206ENST00000489196 SPNS2Q8IVW8 549 aa8.61□□□□□ -1.03
CASD1-206ENST00000489196 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
CASD1-206ENST00000489196 TMEM106CQ9BVX2 250 aa8.56□□□□□ -1.04
CASD1-206ENST00000489196 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.55□□□□□ -1.04
CASD1-206ENST00000489196 IRX5P78411 483 aaPredicted RBP8.55□□□□□ -1.04
CASD1-206ENST00000489196 IFNL1Q8IU54 200 aa8.55□□□□□ -1.04
CASD1-206ENST00000489196 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
CASD1-206ENST00000489196 VASPP50552 380 aaPredicted RBP8.54□□□□□ -1.04
CASD1-206ENST00000489196 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
CASD1-206ENST00000489196 PYGBP11216 843 aa8.49□□□□□ -1.05
CASD1-206ENST00000489196 GSE1Q14687 1217 aa8.48□□□□□ -1.05
CASD1-206ENST00000489196 L3MBTL3Q96JM7 780 aaPredicted RBP8.44□□□□□ -1.06
CASD1-206ENST00000489196 PCDHB8Q9UN66 801 aa8.43□□□□□ -1.06
CASD1-206ENST00000489196 EMP3P54852 163 aa8.42□□□□□ -1.06
CASD1-206ENST00000489196 C3orf67Q6ZVT6 689 aa8.41□□□□□ -1.06
CASD1-206ENST00000489196 ZNF467Q7Z7K2 595 aaPredicted RBP8.41□□□□□ -1.06
CASD1-206ENST00000489196 MARVELD3Q96A59 401 aa8.41□□□□□ -1.06
CASD1-206ENST00000489196 CHRM1P11229 460 aaPredicted RBP8.4□□□□□ -1.06
CASD1-206ENST00000489196 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
CASD1-206ENST00000489196 IFNLR1Q8IU57 520 aaPredicted RBP8.37□□□□□ -1.07
CASD1-206ENST00000489196 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
CASD1-206ENST00000489196 GOLGA2Q08379 1002 aa8.35□□□□□ -1.07
CASD1-206ENST00000489196 CIZ1Q9ULV3 898 aaPredicted RBP8.35□□□□□ -1.07
CASD1-206ENST00000489196 MKRN3Q13064 507 aaKnown RBP8.34□□□□□ -1.07
CASD1-206ENST00000489196 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
CASD1-206ENST00000489196 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
CASD1-206ENST00000489196 PSEN1P49768 467 aa8.32□□□□□ -1.08
CASD1-206ENST00000489196 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
CASD1-206ENST00000489196 PDCD7Q8N8D1 485 aaKnown RBP8.31□□□□□ -1.08
CASD1-206ENST00000489196 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
CASD1-206ENST00000489196 G3V3G9 751 aa8.26□□□□□ -1.09
CASD1-206ENST00000489196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.09
CASD1-206ENST00000489196 POTEB3A0JP26 581 aa8.25□□□□□ -1.09
CASD1-206ENST00000489196 POTEBQ6S5H4 581 aa8.25□□□□□ -1.09
CASD1-206ENST00000489196 TRIM41Q8WV44 630 aa8.25□□□□□ -1.09
CASD1-206ENST00000489196 HOXB1P14653 301 aaPredicted RBP8.22□□□□□ -1.09
CASD1-206ENST00000489196 PTGER2P43116 358 aa8.22□□□□□ -1.09
CASD1-206ENST00000489196 DOK7Q18PE1 504 aa8.22□□□□□ -1.09
CASD1-206ENST00000489196 ILDR1Q86SU0 546 aaPredicted RBP8.22□□□□□ -1.09
CASD1-206ENST00000489196 RNF166Q96A37 237 aaPredicted RBP8.22□□□□□ -1.09
CASD1-206ENST00000489196 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.09
CASD1-206ENST00000489196 CABP2Q9NPB3 220 aa8.21□□□□□ -1.09
CASD1-206ENST00000489196 RIMBP2O15034 1052 aa8.2□□□□□ -1.1
CASD1-206ENST00000489196 ERBB3P21860 1342 aa8.19□□□□□ -1.1
CASD1-206ENST00000489196 HOXB3P14651 431 aaPredicted RBP8.17□□□□□ -1.1
CASD1-206ENST00000489196 BOLA1Q9Y3E2 137 aa8.17□□□□□ -1.1
CASD1-206ENST00000489196 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
CASD1-206ENST00000489196 DPY19L2Q6NUT2 758 aa8.14□□□□□ -1.11
CASD1-206ENST00000489196 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
CASD1-206ENST00000489196 RIOK3O14730 519 aaKnown RBP8.11□□□□□ -1.11
CASD1-206ENST00000489196 EFCAB3Q8N7B9 438 aa8.11□□□□□ -1.11
CASD1-206ENST00000489196 ZNF687Q8N1G0 1237 aa8.1□□□□□ -1.11
CASD1-206ENST00000489196 VGFO15240 615 aaPredicted RBP8.08□□□□□ -1.12
CASD1-206ENST00000489196 VARS2Q5ST30 1063 aaKnown RBP8.07□□□□□ -1.12
CASD1-206ENST00000489196 RNF25Q96BH1 459 aaPredicted RBP8.07□□□□□ -1.12
CASD1-206ENST00000489196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.06□□□□□ -1.12
CASD1-206ENST00000489196 SOX12O15370 315 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms