RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 C19orf67A6NJJ6 358 aa12.58□□□□□ -0.4
CCL20-204ENST00000489160 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
CCL20-204ENST00000489160 CD44P16070 742 aaKnown RBP12.57□□□□□ -0.4
CCL20-204ENST00000489160 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
CCL20-204ENST00000489160 HAX1O00165 279 aa12.55□□□□□ -0.4
CCL20-204ENST00000489160 DCAF8L2P0C7V8 631 aa12.55□□□□□ -0.4
CCL20-204ENST00000489160 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
CCL20-204ENST00000489160 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
CCL20-204ENST00000489160 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
CCL20-204ENST00000489160 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
CCL20-204ENST00000489160 RGL2O15211 777 aa12.43□□□□□ -0.42
CCL20-204ENST00000489160 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
CCL20-204ENST00000489160 PYGBP11216 843 aa12.41□□□□□ -0.42
CCL20-204ENST00000489160 EVX2Q03828 476 aa12.39□□□□□ -0.43
CCL20-204ENST00000489160 CLCN6P51797 869 aa12.37□□□□□ -0.43
CCL20-204ENST00000489160 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
CCL20-204ENST00000489160 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
CCL20-204ENST00000489160 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
CCL20-204ENST00000489160 PHF12Q96QT6 1004 aa12.35□□□□□ -0.43
CCL20-204ENST00000489160 MAP3K13O43283 966 aa12.31□□□□□ -0.44
CCL20-204ENST00000489160 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
CCL20-204ENST00000489160 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
CCL20-204ENST00000489160 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
CCL20-204ENST00000489160 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
CCL20-204ENST00000489160 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
CCL20-204ENST00000489160 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
CCL20-204ENST00000489160 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
CCL20-204ENST00000489160 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
CCL20-204ENST00000489160 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
CCL20-204ENST00000489160 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
CCL20-204ENST00000489160 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
CCL20-204ENST00000489160 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
CCL20-204ENST00000489160 GABBR2O75899 941 aa12.21□□□□□ -0.45
CCL20-204ENST00000489160 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
CCL20-204ENST00000489160 GALR2O43603 387 aaPredicted RBP12.18□□□□□ -0.46
CCL20-204ENST00000489160 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
CCL20-204ENST00000489160 HAP1P54257 671 aaPredicted RBP12.16□□□□□ -0.46
CCL20-204ENST00000489160 PSEN1P49768 467 aa12.15□□□□□ -0.46
CCL20-204ENST00000489160 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
CCL20-204ENST00000489160 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
CCL20-204ENST00000489160 TIE1P35590 1138 aa12.12□□□□□ -0.47
CCL20-204ENST00000489160 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
CCL20-204ENST00000489160 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
CCL20-204ENST00000489160 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
CCL20-204ENST00000489160 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
CCL20-204ENST00000489160 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
CCL20-204ENST00000489160 STK25O00506 426 aa12.08□□□□□ -0.48
CCL20-204ENST00000489160 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
CCL20-204ENST00000489160 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
CCL20-204ENST00000489160 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
CCL20-204ENST00000489160 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
CCL20-204ENST00000489160 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
CCL20-204ENST00000489160 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
CCL20-204ENST00000489160 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
CCL20-204ENST00000489160 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
CCL20-204ENST00000489160 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
CCL20-204ENST00000489160 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
CCL20-204ENST00000489160 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
CCL20-204ENST00000489160 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
CCL20-204ENST00000489160 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
CCL20-204ENST00000489160 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
CCL20-204ENST00000489160 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
CCL20-204ENST00000489160 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
CCL20-204ENST00000489160 POTEIP0CG38 1075 aa11.92□□□□□ -0.5
CCL20-204ENST00000489160 LHX8Q68G74 356 aa11.92□□□□□ -0.5
CCL20-204ENST00000489160 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
CCL20-204ENST00000489160 SOX12O15370 315 aa11.91□□□□□ -0.5
CCL20-204ENST00000489160 EFCAB3Q8N7B9 438 aa11.91□□□□□ -0.5
CCL20-204ENST00000489160 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
CCL20-204ENST00000489160 IER5LQ5T953 404 aa11.9□□□□□ -0.5
CCL20-204ENST00000489160 SLC39A7Q92504 469 aa11.88□□□□□ -0.51
CCL20-204ENST00000489160 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
CCL20-204ENST00000489160 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
CCL20-204ENST00000489160 C7P10643 843 aa11.85□□□□□ -0.51
CCL20-204ENST00000489160 NLRP6P59044 892 aa11.84□□□□□ -0.51
CCL20-204ENST00000489160 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
CCL20-204ENST00000489160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCL20-204ENST00000489160 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
CCL20-204ENST00000489160 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
CCL20-204ENST00000489160 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
CCL20-204ENST00000489160 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
CCL20-204ENST00000489160 METRNQ9UJH8 293 aa11.79□□□□□ -0.52
CCL20-204ENST00000489160 SEC24BO95487 1268 aa11.78□□□□□ -0.52
CCL20-204ENST00000489160 FBXO22Q8NEZ5 403 aa11.78□□□□□ -0.52
CCL20-204ENST00000489160 PLCG2P16885 1265 aa11.77□□□□□ -0.53
CCL20-204ENST00000489160 BCANQ96GW7 911 aa11.73□□□□□ -0.53
CCL20-204ENST00000489160 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
CCL20-204ENST00000489160 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
CCL20-204ENST00000489160 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
CCL20-204ENST00000489160 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
CCL20-204ENST00000489160 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
CCL20-204ENST00000489160 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
CCL20-204ENST00000489160 PPP1R37O75864 691 aa11.65□□□□□ -0.54
CCL20-204ENST00000489160 G3V3G9 751 aa11.64□□□□□ -0.55
CCL20-204ENST00000489160 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
CCL20-204ENST00000489160 MICALL2Q8IY33 904 aa11.58□□□□□ -0.56
CCL20-204ENST00000489160 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
CCL20-204ENST00000489160 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
CCL20-204ENST00000489160 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
CCL20-204ENST00000489160 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms