RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
SNRNP27-205ENST00000488986 KIF12Q96FN5 646 aa13.15□□□□□ -0.3
SNRNP27-205ENST00000488986 PELP1Q8IZL8 1130 aaKnown RBP13.14□□□□□ -0.31
SNRNP27-205ENST00000488986 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
SNRNP27-205ENST00000488986 NUBP1P53384 320 aa13.1□□□□□ -0.31
SNRNP27-205ENST00000488986 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
SNRNP27-205ENST00000488986 MAP3K13O43283 966 aa13.09□□□□□ -0.31
SNRNP27-205ENST00000488986 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
SNRNP27-205ENST00000488986 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
SNRNP27-205ENST00000488986 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
SNRNP27-205ENST00000488986 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
SNRNP27-205ENST00000488986 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
SNRNP27-205ENST00000488986 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
SNRNP27-205ENST00000488986 FAM212AQ96EL1 285 aa13□□□□□ -0.33
SNRNP27-205ENST00000488986 BMP2KQ9NSY1 1161 aaPredicted RBP13□□□□□ -0.33
SNRNP27-205ENST00000488986 SLC39A7Q92504 469 aa12.98□□□□□ -0.33
SNRNP27-205ENST00000488986 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
SNRNP27-205ENST00000488986 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
SNRNP27-205ENST00000488986 C7P10643 843 aa12.96□□□□□ -0.33
SNRNP27-205ENST00000488986 TIE1P35590 1138 aa12.95□□□□□ -0.34
SNRNP27-205ENST00000488986 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
SNRNP27-205ENST00000488986 SGIP1Q9BQI5 828 aa12.92□□□□□ -0.34
SNRNP27-205ENST00000488986 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
SNRNP27-205ENST00000488986 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
SNRNP27-205ENST00000488986 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
SNRNP27-205ENST00000488986 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
SNRNP27-205ENST00000488986 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
SNRNP27-205ENST00000488986 PYGBP11216 843 aa12.86□□□□□ -0.35
SNRNP27-205ENST00000488986 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
SNRNP27-205ENST00000488986 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
SNRNP27-205ENST00000488986 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
SNRNP27-205ENST00000488986 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
SNRNP27-205ENST00000488986 SEC24BO95487 1268 aa12.76□□□□□ -0.37
SNRNP27-205ENST00000488986 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
SNRNP27-205ENST00000488986 GSE1Q14687 1217 aa12.75□□□□□ -0.37
SNRNP27-205ENST00000488986 IFNLR1Q8IU57 520 aaPredicted RBP12.75□□□□□ -0.37
SNRNP27-205ENST00000488986 MAMSTRQ6ZN01 415 aa12.74□□□□□ -0.37
SNRNP27-205ENST00000488986 IER5LQ5T953 404 aa12.73□□□□□ -0.37
SNRNP27-205ENST00000488986 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
SNRNP27-205ENST00000488986 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
SNRNP27-205ENST00000488986 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
SNRNP27-205ENST00000488986 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
SNRNP27-205ENST00000488986 CHRM1P11229 460 aaPredicted RBP12.62□□□□□ -0.39
SNRNP27-205ENST00000488986 PLCG2P16885 1265 aa12.62□□□□□ -0.39
SNRNP27-205ENST00000488986 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
SNRNP27-205ENST00000488986 POTEMA6NI47 508 aa12.56□□□□□ -0.4
SNRNP27-205ENST00000488986 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
SNRNP27-205ENST00000488986 PSEN1P49768 467 aa12.54□□□□□ -0.4
SNRNP27-205ENST00000488986 POTEGQ6S5H5 508 aa12.54□□□□□ -0.4
SNRNP27-205ENST00000488986 LCE2DQ5TA82 110 aaPredicted RBP12.52□□□□□ -0.41
SNRNP27-205ENST00000488986 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
SNRNP27-205ENST00000488986 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
SNRNP27-205ENST00000488986 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
SNRNP27-205ENST00000488986 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
SNRNP27-205ENST00000488986 SLAIN1Q8ND83 568 aa12.48□□□□□ -0.41
SNRNP27-205ENST00000488986 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
SNRNP27-205ENST00000488986 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
SNRNP27-205ENST00000488986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.422e-6■■■□□ 16.4
SNRNP27-205ENST00000488986 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
SNRNP27-205ENST00000488986 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
SNRNP27-205ENST00000488986 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
SNRNP27-205ENST00000488986 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
SNRNP27-205ENST00000488986 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
SNRNP27-205ENST00000488986 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
SNRNP27-205ENST00000488986 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
SNRNP27-205ENST00000488986 ST18O60284 1047 aa12.31□□□□□ -0.44
SNRNP27-205ENST00000488986 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
SNRNP27-205ENST00000488986 PCDH10Q9P2E7 1040 aa12.28□□□□□ -0.44
SNRNP27-205ENST00000488986 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
SNRNP27-205ENST00000488986 EFCAB3Q8N7B9 438 aa12.27□□□□□ -0.45
SNRNP27-205ENST00000488986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
SNRNP27-205ENST00000488986 SNPHO15079 494 aa12.23□□□□□ -0.45
SNRNP27-205ENST00000488986 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
SNRNP27-205ENST00000488986 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
SNRNP27-205ENST00000488986 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
SNRNP27-205ENST00000488986 G3V3G9 751 aa12.2□□□□□ -0.46
SNRNP27-205ENST00000488986 CDAN1Q8IWY9 1227 aa12.18□□□□□ -0.46
SNRNP27-205ENST00000488986 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
SNRNP27-205ENST00000488986 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
SNRNP27-205ENST00000488986 SOX12O15370 315 aa12.11□□□□□ -0.47
SNRNP27-205ENST00000488986 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
SNRNP27-205ENST00000488986 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
SNRNP27-205ENST00000488986 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
SNRNP27-205ENST00000488986 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
SNRNP27-205ENST00000488986 PKD2Q13563 968 aa12.07□□□□□ -0.48
SNRNP27-205ENST00000488986 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
SNRNP27-205ENST00000488986 TAOK2Q9UL54 1235 aa12.06□□□□□ -0.48
SNRNP27-205ENST00000488986 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
SNRNP27-205ENST00000488986 EMP3P54852 163 aa12.05□□□□□ -0.48
SNRNP27-205ENST00000488986 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
SNRNP27-205ENST00000488986 STK25O00506 426 aa12.02□□□□□ -0.49
SNRNP27-205ENST00000488986 RGL2O15211 777 aa12.02□□□□□ -0.49
SNRNP27-205ENST00000488986 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
SNRNP27-205ENST00000488986 NLRP6P59044 892 aa12□□□□□ -0.49
SNRNP27-205ENST00000488986 FBXO22Q8NEZ5 403 aa11.99□□□□□ -0.49
SNRNP27-205ENST00000488986 POTEB3A0JP26 581 aa11.97□□□□□ -0.49
SNRNP27-205ENST00000488986 FAM205CA6NFA0 338 aa11.97□□□□□ -0.49
SNRNP27-205ENST00000488986 POTEBQ6S5H4 581 aa11.97□□□□□ -0.49
SNRNP27-205ENST00000488986 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
SNRNP27-205ENST00000488986 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 309.4 ms