RNA–Protein interactions for RNA: ENST00000488981.1

NF1-212, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 331 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-212ENST00000488981 PCDH10Q9P2E7 1040 aa6.72□□□□□ -1.33
NF1-212ENST00000488981 POTEMA6NI47 508 aa6.71□□□□□ -1.34
NF1-212ENST00000488981 MNX1P50219 401 aaPredicted RBP6.71□□□□□ -1.34
NF1-212ENST00000488981 ASTLQ6HA08 431 aaPredicted RBP6.71□□□□□ -1.34
NF1-212ENST00000488981 ZBTB47Q9UFB7 747 aaPredicted RBP6.71□□□□□ -1.34
NF1-212ENST00000488981 METRNQ9UJH8 293 aa6.7□□□□□ -1.34
NF1-212ENST00000488981 POTEB2H3BUK9 544 aa6.68□□□□□ -1.34
NF1-212ENST00000488981 MS4A3Q96HJ5 214 aa6.68□□□□□ -1.34
NF1-212ENST00000488981 ATMINO43313 823 aaPredicted RBP6.67□□□□□ -1.34
NF1-212ENST00000488981 POTEGQ6S5H5 508 aa6.67□□□□□ -1.34
NF1-212ENST00000488981 SCUBE2Q9NQ36 999 aa6.67□□□□□ -1.34
NF1-212ENST00000488981 VASPP50552 380 aaPredicted RBP6.66□□□□□ -1.34
NF1-212ENST00000488981 PELP1Q8IZL8 1130 aaKnown RBP6.65□□□□□ -1.34
NF1-212ENST00000488981 MIER1Q8N108 512 aa6.64□□□□□ -1.35
NF1-212ENST00000488981 PLCD3Q8N3E9 789 aa6.63□□□□□ -1.35
NF1-212ENST00000488981 TSPYL2Q9H2G4 693 aaPredicted RBP6.61□□□□□ -1.35
NF1-212ENST00000488981 CCDC61Q9Y6R9 512 aa6.61□□□□□ -1.35
NF1-212ENST00000488981 TIE1P35590 1138 aa6.59□□□□□ -1.35
NF1-212ENST00000488981 KIF12Q96FN5 646 aa6.58□□□□□ -1.36
NF1-212ENST00000488981 ATN1P54259 1190 aaPredicted RBP6.57□□□□□ -1.36
NF1-212ENST00000488981 BMP2KQ9NSY1 1161 aaPredicted RBP6.55□□□□□ -1.36
NF1-212ENST00000488981 POTEJP0CG39 1038 aa6.54□□□□□ -1.36
NF1-212ENST00000488981 IER5LQ5T953 404 aa6.54□□□□□ -1.36
NF1-212ENST00000488981 SGIP1Q9BQI5 828 aa6.54□□□□□ -1.36
NF1-212ENST00000488981 SEC24BO95487 1268 aa6.53□□□□□ -1.36
NF1-212ENST00000488981 IFNLR1Q8IU57 520 aaPredicted RBP6.53□□□□□ -1.36
NF1-212ENST00000488981 KLHL34Q8N239 644 aa6.53□□□□□ -1.36
NF1-212ENST00000488981 SPOCK2Q92563 424 aa6.53□□□□□ -1.36
NF1-212ENST00000488981 FAM163AQ96GL9 167 aaPredicted RBP6.52□□□□□ -1.37
NF1-212ENST00000488981 MAP3K13O43283 966 aa6.51□□□□□ -1.37
NF1-212ENST00000488981 TRIM41Q8WV44 630 aa6.5□□□□□ -1.37
NF1-212ENST00000488981 TTLL13PA6NNM8 815 aa6.49□□□□□ -1.37
NF1-212ENST00000488981 GSE1Q14687 1217 aa6.49□□□□□ -1.37
NF1-212ENST00000488981 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
NF1-212ENST00000488981 NUBP1P53384 320 aa6.48□□□□□ -1.37
NF1-212ENST00000488981 RASEFQ8IZ41 740 aa6.48□□□□□ -1.37
NF1-212ENST00000488981 FAM212AQ96EL1 285 aa6.47□□□□□ -1.37
NF1-212ENST00000488981 POTEFA5A3E0 1075 aa6.46□□□□□ -1.38
NF1-212ENST00000488981 TRIM35Q9UPQ4 493 aa6.46□□□□□ -1.38
NF1-212ENST00000488981 PCDHB13Q9Y5F0 798 aa6.46□□□□□ -1.38
NF1-212ENST00000488981 CHRM1P11229 460 aaPredicted RBP6.45□□□□□ -1.38
NF1-212ENST00000488981 TRPC6Q9Y210 931 aa6.45□□□□□ -1.38
NF1-212ENST00000488981 PLCG2P16885 1265 aa6.43□□□□□ -1.38
NF1-212ENST00000488981 COLQQ9Y215 455 aaPredicted RBP6.43□□□□□ -1.38
NF1-212ENST00000488981 AMER1Q5JTC6 1135 aaPredicted RBP6.41□□□□□ -1.38
NF1-212ENST00000488981 CDAN1Q8IWY9 1227 aa6.41□□□□□ -1.38
NF1-212ENST00000488981 SLAIN1Q8ND83 568 aa6.41□□□□□ -1.38
NF1-212ENST00000488981 TMEM106CQ9BVX2 250 aa6.4□□□□□ -1.38
NF1-212ENST00000488981 TMEM121BQ9BXQ6 578 aaPredicted RBP6.4□□□□□ -1.38
NF1-212ENST00000488981 SNPHO15079 494 aa6.39□□□□□ -1.39
NF1-212ENST00000488981 DCAF8Q5TAQ9 597 aa6.39□□□□□ -1.39
NF1-212ENST00000488981 IFNL1Q8IU54 200 aa6.38□□□□□ -1.39
NF1-212ENST00000488981 TAOK2Q9UL54 1235 aa6.37□□□□□ -1.39
NF1-212ENST00000488981 ST18O60284 1047 aa6.36□□□□□ -1.39
NF1-212ENST00000488981 IRX5P78411 483 aaPredicted RBP6.35□□□□□ -1.39
NF1-212ENST00000488981 OCEL1Q9H607 264 aa6.35□□□□□ -1.39
NF1-212ENST00000488981 CIZ1Q9ULV3 898 aaPredicted RBP6.34□□□□□ -1.39
NF1-212ENST00000488981 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.33□□□□□ -1.4
NF1-212ENST00000488981 ZNF467Q7Z7K2 595 aaPredicted RBP6.32□□□□□ -1.4
NF1-212ENST00000488981 PKD2Q13563 968 aa6.31□□□□□ -1.4
NF1-212ENST00000488981 ECM2O94769 699 aaPredicted RBP6.28□□□□□ -1.4
NF1-212ENST00000488981 GOLGA2Q08379 1002 aa6.28□□□□□ -1.4
NF1-212ENST00000488981 C3orf67Q6ZVT6 689 aa6.28□□□□□ -1.4
NF1-212ENST00000488981 MMRN1Q13201 1228 aa6.27□□□□□ -1.41
NF1-212ENST00000488981 L3MBTL3Q96JM7 780 aaPredicted RBP6.27□□□□□ -1.41
NF1-212ENST00000488981 PYGBP11216 843 aa6.26□□□□□ -1.41
NF1-212ENST00000488981 SPNS2Q8IVW8 549 aa6.26□□□□□ -1.41
NF1-212ENST00000488981 RIOK3O14730 519 aaKnown RBP6.25□□□□□ -1.41
NF1-212ENST00000488981 MKRN3Q13064 507 aaKnown RBP6.25□□□□□ -1.41
NF1-212ENST00000488981 VGFO15240 615 aaPredicted RBP6.24□□□□□ -1.41
NF1-212ENST00000488981 PDAP1Q13442 181 aaKnown RBP6.23□□□□□ -1.41
NF1-212ENST00000488981 EMP3P54852 163 aa6.22□□□□□ -1.41
NF1-212ENST00000488981 RTN4Q9NQC3 1192 aaKnown RBP6.22□□□□□ -1.41
NF1-212ENST00000488981 PCDHB8Q9UN66 801 aa6.22□□□□□ -1.41
NF1-212ENST00000488981 PDCD7Q8N8D1 485 aaKnown RBP6.21□□□□□ -1.42
NF1-212ENST00000488981 MARVELD3Q96A59 401 aa6.2□□□□□ -1.42
NF1-212ENST00000488981 DNAJC5Q9H3Z4 198 aa6.2□□□□□ -1.42
NF1-212ENST00000488981 G3V3G9 751 aa6.18□□□□□ -1.42
NF1-212ENST00000488981 PSEN1P49768 467 aa6.18□□□□□ -1.42
NF1-212ENST00000488981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.18□□□□□ -1.42
NF1-212ENST00000488981 RGL2O15211 777 aa6.17□□□□□ -1.42
NF1-212ENST00000488981 RNF25Q96BH1 459 aaPredicted RBP6.17□□□□□ -1.42
NF1-212ENST00000488981 RYDENQ9NUL5 291 aaKnown RBP6.16□□□□□ -1.42
NF1-212ENST00000488981 HS6ST3Q8IZP7 471 aa6.15□□□□□ -1.42
NF1-212ENST00000488981 HS3ST6Q96QI5 342 aa6.15□□□□□ -1.42
NF1-212ENST00000488981 SOX12O15370 315 aa6.14□□□□□ -1.43
NF1-212ENST00000488981 FAM205CA6NFA0 338 aa6.13□□□□□ -1.43
NF1-212ENST00000488981 ILDR1Q86SU0 546 aaPredicted RBP6.13□□□□□ -1.43
NF1-212ENST00000488981 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.12□□□□□ -1.43
NF1-212ENST00000488981 DOK7Q18PE1 504 aa6.12□□□□□ -1.43
NF1-212ENST00000488981 ZFP91Q96JP5 570 aaPredicted RBP6.12□□□□□ -1.43
NF1-212ENST00000488981 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
NF1-212ENST00000488981 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
NF1-212ENST00000488981 RIMBP2O15034 1052 aa6.11□□□□□ -1.43
NF1-212ENST00000488981 ZNF710Q8N1W2 664 aa6.11□□□□□ -1.43
NF1-212ENST00000488981 BOLA1Q9Y3E2 137 aa6.11□□□□□ -1.43
NF1-212ENST00000488981 STK25O00506 426 aa6.1□□□□□ -1.43
NF1-212ENST00000488981 BBXQ8WY36 941 aaPredicted RBP6.09□□□□□ -1.43
NF1-212ENST00000488981 BCL11BQ9C0K0 894 aaPredicted RBP6.09□□□□□ -1.43
NF1-212ENST00000488981 HOXB1P14653 301 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms