RNA–Protein interactions for RNA: ENST00000488913.1

PATJ-209, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 3

Gene PATJ, Length 532 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-209ENST00000488913 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
PATJ-209ENST00000488913 MS4A3Q96HJ5 214 aa17.34■□□□□ 0.37
PATJ-209ENST00000488913 NUBP1P53384 320 aa17.32■□□□□ 0.36
PATJ-209ENST00000488913 VASPP50552 380 aaPredicted RBP17.29■□□□□ 0.36
PATJ-209ENST00000488913 KIF12Q96FN5 646 aa17.28■□□□□ 0.36
PATJ-209ENST00000488913 LHX8Q68G74 356 aa17.27■□□□□ 0.36
PATJ-209ENST00000488913 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
PATJ-209ENST00000488913 MAP3K13O43283 966 aa17.23■□□□□ 0.35
PATJ-209ENST00000488913 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
PATJ-209ENST00000488913 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
PATJ-209ENST00000488913 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
PATJ-209ENST00000488913 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
PATJ-209ENST00000488913 ASTLQ6HA08 431 aaPredicted RBP17.11■□□□□ 0.33
PATJ-209ENST00000488913 TRPC6Q9Y210 931 aa17.11■□□□□ 0.33
PATJ-209ENST00000488913 PCDHB13Q9Y5F0 798 aa17.09■□□□□ 0.33
PATJ-209ENST00000488913 ATN1P54259 1190 aaPredicted RBP17.04■□□□□ 0.32
PATJ-209ENST00000488913 BMP2KQ9NSY1 1161 aaPredicted RBP17.03■□□□□ 0.32
PATJ-209ENST00000488913 PYGBP11216 843 aa17.02■□□□□ 0.32
PATJ-209ENST00000488913 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
PATJ-209ENST00000488913 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
PATJ-209ENST00000488913 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
PATJ-209ENST00000488913 METRNQ9UJH8 293 aa16.99■□□□□ 0.31
PATJ-209ENST00000488913 TIE1P35590 1138 aa16.98■□□□□ 0.31
PATJ-209ENST00000488913 SLC39A7Q92504 469 aa16.98■□□□□ 0.31
PATJ-209ENST00000488913 C7P10643 843 aa16.95■□□□□ 0.3
PATJ-209ENST00000488913 GSE1Q14687 1217 aa16.95■□□□□ 0.3
PATJ-209ENST00000488913 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
PATJ-209ENST00000488913 TTLL13PA6NNM8 815 aa16.93■□□□□ 0.3
PATJ-209ENST00000488913 SPOCK2Q92563 424 aa16.93■□□□□ 0.3
PATJ-209ENST00000488913 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
PATJ-209ENST00000488913 PCDHB8Q9UN66 801 aa16.86■□□□□ 0.29
PATJ-209ENST00000488913 TMEM106CQ9BVX2 250 aa16.85■□□□□ 0.29
PATJ-209ENST00000488913 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
PATJ-209ENST00000488913 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
PATJ-209ENST00000488913 SEC24BO95487 1268 aa16.77■□□□□ 0.28
PATJ-209ENST00000488913 POTEFA5A3E0 1075 aa16.76■□□□□ 0.27
PATJ-209ENST00000488913 CHRM1P11229 460 aaPredicted RBP16.74■□□□□ 0.27
PATJ-209ENST00000488913 POTEJP0CG39 1038 aa16.73■□□□□ 0.27
PATJ-209ENST00000488913 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
PATJ-209ENST00000488913 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
PATJ-209ENST00000488913 IER5LQ5T953 404 aa16.69■□□□□ 0.26
PATJ-209ENST00000488913 MAMSTRQ6ZN01 415 aa16.64■□□□□ 0.25
PATJ-209ENST00000488913 PSEN1P49768 467 aa16.6■□□□□ 0.25
PATJ-209ENST00000488913 PLCG2P16885 1265 aa16.59■□□□□ 0.25
PATJ-209ENST00000488913 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
PATJ-209ENST00000488913 IRX5P78411 483 aaPredicted RBP16.55■□□□□ 0.24
PATJ-209ENST00000488913 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
PATJ-209ENST00000488913 PDAP1Q13442 181 aaKnown RBP16.53■□□□□ 0.24
PATJ-209ENST00000488913 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
PATJ-209ENST00000488913 OCEL1Q9H607 264 aa16.51■□□□□ 0.23
PATJ-209ENST00000488913 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
PATJ-209ENST00000488913 CABP2Q9NPB3 220 aa16.42■□□□□ 0.22
PATJ-209ENST00000488913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.213e-9■■■■■ 32.1
PATJ-209ENST00000488913 PDCD7Q8N8D1 485 aaKnown RBP16.35■□□□□ 0.21
PATJ-209ENST00000488913 SLAIN1Q8ND83 568 aa16.35■□□□□ 0.21
PATJ-209ENST00000488913 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
PATJ-209ENST00000488913 RIOK3O14730 519 aaKnown RBP16.33■□□□□ 0.2
PATJ-209ENST00000488913 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
PATJ-209ENST00000488913 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
PATJ-209ENST00000488913 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.26■□□□□ 0.19
PATJ-209ENST00000488913 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
PATJ-209ENST00000488913 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
PATJ-209ENST00000488913 EFCAB3Q8N7B9 438 aa16.25■□□□□ 0.19
PATJ-209ENST00000488913 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
PATJ-209ENST00000488913 POTEMA6NI47 508 aa16.24■□□□□ 0.19
PATJ-209ENST00000488913 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
PATJ-209ENST00000488913 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
PATJ-209ENST00000488913 POTEGQ6S5H5 508 aa16.21■□□□□ 0.19
PATJ-209ENST00000488913 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
PATJ-209ENST00000488913 C3orf67Q6ZVT6 689 aa16.19■□□□□ 0.18
PATJ-209ENST00000488913 LCE2DQ5TA82 110 aaPredicted RBP16.18■□□□□ 0.18
PATJ-209ENST00000488913 PKD2Q13563 968 aa16.16■□□□□ 0.18
PATJ-209ENST00000488913 G3V3G9 751 aa16.15■□□□□ 0.18
PATJ-209ENST00000488913 TAOK2Q9UL54 1235 aa16.13■□□□□ 0.17
PATJ-209ENST00000488913 BOLA1Q9Y3E2 137 aa16.11■□□□□ 0.17
PATJ-209ENST00000488913 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
PATJ-209ENST00000488913 RGL2O15211 777 aa16.08■□□□□ 0.16
PATJ-209ENST00000488913 STK24Q9Y6E0 443 aa16.08■□□□□ 0.16
PATJ-209ENST00000488913 SOX12O15370 315 aa16.07■□□□□ 0.16
PATJ-209ENST00000488913 ST18O60284 1047 aa16.05■□□□□ 0.16
PATJ-209ENST00000488913 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
PATJ-209ENST00000488913 STK25O00506 426 aa16.04■□□□□ 0.16
PATJ-209ENST00000488913 SNPHO15079 494 aa16.03■□□□□ 0.16
PATJ-209ENST00000488913 MS4A4AQ96JQ5 239 aa15.98■□□□□ 0.15
PATJ-209ENST00000488913 PLSCR2Q9NRY7 297 aa15.97■□□□□ 0.15
PATJ-209ENST00000488913 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
PATJ-209ENST00000488913 NLRP6P59044 892 aa15.94■□□□□ 0.14
PATJ-209ENST00000488913 MICALL2Q8IY33 904 aa15.92■□□□□ 0.14
PATJ-209ENST00000488913 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
PATJ-209ENST00000488913 MFRPQ9BY79 579 aa15.88■□□□□ 0.13
PATJ-209ENST00000488913 FBXO22Q8NEZ5 403 aa15.87■□□□□ 0.13
PATJ-209ENST00000488913 MARVELD3Q96A59 401 aa15.86■□□□□ 0.13
PATJ-209ENST00000488913 CDAN1Q8IWY9 1227 aa15.82■□□□□ 0.12
PATJ-209ENST00000488913 TMEM92Q6UXU6 159 aa15.81■□□□□ 0.12
PATJ-209ENST00000488913 HOXB3P14651 431 aaPredicted RBP15.76■□□□□ 0.11
PATJ-209ENST00000488913 EMP3P54852 163 aa15.74■□□□□ 0.11
PATJ-209ENST00000488913 ZNF710Q8N1W2 664 aa15.74■□□□□ 0.11
PATJ-209ENST00000488913 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
PATJ-209ENST00000488913 DOK7Q18PE1 504 aa15.72■□□□□ 0.11
PATJ-209ENST00000488913 HS6ST3Q8IZP7 471 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms