RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 AMER1Q5JTC6 1135 aaPredicted RBP7.08□□□□□ -1.28
EPB41-211ENST00000488277 EVX2Q03828 476 aa7.06□□□□□ -1.28
EPB41-211ENST00000488277 CCDC61Q9Y6R9 512 aa7.06□□□□□ -1.28
EPB41-211ENST00000488277 RTN4Q9NQC3 1192 aaKnown RBP7.05□□□□□ -1.28
EPB41-211ENST00000488277 PKD2Q13563 968 aa7.04□□□□□ -1.28
EPB41-211ENST00000488277 PYGBP11216 843 aa7.03□□□□□ -1.28
EPB41-211ENST00000488277 ZNF579Q8NAF0 562 aaKnown RBP7.03□□□□□ -1.28
EPB41-211ENST00000488277 PHF12Q96QT6 1004 aa7.03□□□□□ -1.28
EPB41-211ENST00000488277 ECM2O94769 699 aaPredicted RBP7.02□□□□□ -1.29
EPB41-211ENST00000488277 TRIM41Q8WV44 630 aa7.02□□□□□ -1.29
EPB41-211ENST00000488277 KIF12Q96FN5 646 aa6.99□□□□□ -1.29
EPB41-211ENST00000488277 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
EPB41-211ENST00000488277 MAP3K13O43283 966 aa6.97□□□□□ -1.29
EPB41-211ENST00000488277 PCDHB13Q9Y5F0 798 aa6.97□□□□□ -1.29
EPB41-211ENST00000488277 SP7Q8TDD2 431 aaPredicted RBP6.96□□□□□ -1.3
EPB41-211ENST00000488277 MS4A3Q96HJ5 214 aa6.95□□□□□ -1.3
EPB41-211ENST00000488277 RGL2O15211 777 aa6.94□□□□□ -1.3
EPB41-211ENST00000488277 CLCN6P51797 869 aa6.94□□□□□ -1.3
EPB41-211ENST00000488277 SGIP1Q9BQI5 828 aa6.94□□□□□ -1.3
EPB41-211ENST00000488277 GALR2O43603 387 aaPredicted RBP6.93□□□□□ -1.3
EPB41-211ENST00000488277 GABBR2O75899 941 aa6.93□□□□□ -1.3
EPB41-211ENST00000488277 ZNF467Q7Z7K2 595 aaPredicted RBP6.93□□□□□ -1.3
EPB41-211ENST00000488277 IFNL1Q8IU54 200 aa6.93□□□□□ -1.3
EPB41-211ENST00000488277 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
EPB41-211ENST00000488277 PCDHB8Q9UN66 801 aa6.93□□□□□ -1.3
EPB41-211ENST00000488277 RIOK3O14730 519 aaKnown RBP6.92□□□□□ -1.3
EPB41-211ENST00000488277 DCAF8L2P0C7V8 631 aa6.91□□□□□ -1.3
EPB41-211ENST00000488277 VGFO15240 615 aaPredicted RBP6.88□□□□□ -1.31
EPB41-211ENST00000488277 TAOK2Q9UL54 1235 aa6.88□□□□□ -1.31
EPB41-211ENST00000488277 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
EPB41-211ENST00000488277 PDAP1Q13442 181 aaKnown RBP6.87□□□□□ -1.31
EPB41-211ENST00000488277 PSEN1P49768 467 aa6.86□□□□□ -1.31
EPB41-211ENST00000488277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.84□□□□□ -1.31
EPB41-211ENST00000488277 TIE1P35590 1138 aa6.84□□□□□ -1.31
EPB41-211ENST00000488277 ZFP91Q96JP5 570 aaPredicted RBP6.84□□□□□ -1.31
EPB41-211ENST00000488277 DCBLD2Q96PD2 775 aa6.84□□□□□ -1.31
EPB41-211ENST00000488277 TMEM106CQ9BVX2 250 aa6.84□□□□□ -1.31
EPB41-211ENST00000488277 BMP2KQ9NSY1 1161 aaPredicted RBP6.83□□□□□ -1.32
EPB41-211ENST00000488277 STK25O00506 426 aa6.82□□□□□ -1.32
EPB41-211ENST00000488277 TTLL13PA6NNM8 815 aa6.81□□□□□ -1.32
EPB41-211ENST00000488277 CHGAP10645 457 aaKnown RBP6.81□□□□□ -1.32
EPB41-211ENST00000488277 BCL11BQ9C0K0 894 aaPredicted RBP6.81□□□□□ -1.32
EPB41-211ENST00000488277 STK24Q9Y6E0 443 aa6.81□□□□□ -1.32
EPB41-211ENST00000488277 ATMINO43313 823 aaPredicted RBP6.8□□□□□ -1.32
EPB41-211ENST00000488277 ATN1P54259 1190 aaPredicted RBP6.8□□□□□ -1.32
EPB41-211ENST00000488277 ASTLQ6HA08 431 aaPredicted RBP6.8□□□□□ -1.32
EPB41-211ENST00000488277 HS6ST3Q8IZP7 471 aa6.79□□□□□ -1.32
EPB41-211ENST00000488277 POTEIP0CG38 1075 aa6.78□□□□□ -1.32
EPB41-211ENST00000488277 GOLGA2Q08379 1002 aa6.78□□□□□ -1.32
EPB41-211ENST00000488277 CABP2Q9NPB3 220 aa6.78□□□□□ -1.32
EPB41-211ENST00000488277 TRIM35Q9UPQ4 493 aa6.78□□□□□ -1.32
EPB41-211ENST00000488277 PELP1Q8IZL8 1130 aaKnown RBP6.75□□□□□ -1.33
EPB41-211ENST00000488277 MKRN3Q13064 507 aaKnown RBP6.74□□□□□ -1.33
EPB41-211ENST00000488277 EFCAB3Q8N7B9 438 aa6.74□□□□□ -1.33
EPB41-211ENST00000488277 SLC39A7Q92504 469 aa6.72□□□□□ -1.33
EPB41-211ENST00000488277 IER5LQ5T953 404 aa6.71□□□□□ -1.34
EPB41-211ENST00000488277 BBXQ8WY36 941 aaPredicted RBP6.7□□□□□ -1.34
EPB41-211ENST00000488277 DNAJC5Q9H3Z4 198 aa6.7□□□□□ -1.34
EPB41-211ENST00000488277 METRNQ9UJH8 293 aa6.7□□□□□ -1.34
EPB41-211ENST00000488277 SOX12O15370 315 aa6.69□□□□□ -1.34
EPB41-211ENST00000488277 C7P10643 843 aa6.69□□□□□ -1.34
EPB41-211ENST00000488277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.69□□□□□ -1.34
EPB41-211ENST00000488277 SEC24BO95487 1268 aa6.68□□□□□ -1.34
EPB41-211ENST00000488277 NKX1-1Q15270 411 aaPredicted RBP6.68□□□□□ -1.34
EPB41-211ENST00000488277 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.68□□□□□ -1.34
EPB41-211ENST00000488277 PHF8Q9UPP1 1060 aa6.68□□□□□ -1.34
EPB41-211ENST00000488277 PLCG2P16885 1265 aa6.67□□□□□ -1.34
EPB41-211ENST00000488277 NLRP6P59044 892 aa6.67□□□□□ -1.34
EPB41-211ENST00000488277 IRX5P78411 483 aaPredicted RBP6.67□□□□□ -1.34
EPB41-211ENST00000488277 MFRPQ9BY79 579 aa6.67□□□□□ -1.34
EPB41-211ENST00000488277 OCEL1Q9H607 264 aa6.66□□□□□ -1.34
EPB41-211ENST00000488277 COLQQ9Y215 455 aaPredicted RBP6.65□□□□□ -1.34
EPB41-211ENST00000488277 POTEFA5A3E0 1075 aa6.64□□□□□ -1.35
EPB41-211ENST00000488277 ILDR1Q86SU0 546 aaPredicted RBP6.64□□□□□ -1.35
EPB41-211ENST00000488277 PDCD7Q8N8D1 485 aaKnown RBP6.64□□□□□ -1.35
EPB41-211ENST00000488277 FBXO22Q8NEZ5 403 aa6.64□□□□□ -1.35
EPB41-211ENST00000488277 MS4A4AQ96JQ5 239 aa6.63□□□□□ -1.35
EPB41-211ENST00000488277 CFAP44Q96MT7 982 aa6.63□□□□□ -1.35
EPB41-211ENST00000488277 RYDENQ9NUL5 291 aaKnown RBP6.63□□□□□ -1.35
EPB41-211ENST00000488277 GTPBP6O43824 516 aaPredicted RBP6.62□□□□□ -1.35
EPB41-211ENST00000488277 DPY19L2Q6NUT2 758 aa6.62□□□□□ -1.35
EPB41-211ENST00000488277 PAXIP1Q6ZW49 1069 aaPredicted RBP6.62□□□□□ -1.35
EPB41-211ENST00000488277 SPRYD3Q8NCJ5 442 aa6.62□□□□□ -1.35
EPB41-211ENST00000488277 G3V3G9 751 aa6.58□□□□□ -1.36
EPB41-211ENST00000488277 PPP1R37O75864 691 aa6.58□□□□□ -1.36
EPB41-211ENST00000488277 L3MBTL3Q96JM7 780 aaPredicted RBP6.58□□□□□ -1.36
EPB41-211ENST00000488277 PLCB2Q00722 1185 aa6.57□□□□□ -1.36
EPB41-211ENST00000488277 BOLA1Q9Y3E2 137 aa6.57□□□□□ -1.36
EPB41-211ENST00000488277 POTEB2H3BUK9 544 aa6.56□□□□□ -1.36
EPB41-211ENST00000488277 MICALL2Q8IY33 904 aa6.55□□□□□ -1.36
EPB41-211ENST00000488277 LHX8Q68G74 356 aa6.54□□□□□ -1.36
EPB41-211ENST00000488277 POTEJP0CG39 1038 aa6.53□□□□□ -1.36
EPB41-211ENST00000488277 C3orf67Q6ZVT6 689 aa6.52□□□□□ -1.37
EPB41-211ENST00000488277 TMEM121BQ9BXQ6 578 aaPredicted RBP6.52□□□□□ -1.37
EPB41-211ENST00000488277 SCUBE2Q9NQ36 999 aa6.51□□□□□ -1.37
EPB41-211ENST00000488277 HAP1P54257 671 aaPredicted RBP6.5□□□□□ -1.37
EPB41-211ENST00000488277 MAMSTRQ6ZN01 415 aa6.5□□□□□ -1.37
EPB41-211ENST00000488277 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.5□□□□□ -1.37
EPB41-211ENST00000488277 TSHZ2Q9NRE2 1034 aa6.49□□□□□ -1.37
EPB41-211ENST00000488277 CADPS2Q86UW7 1296 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms