RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ZRANB1Q9UGI0 708 aa8.97□□□□□ -0.97
RBM28-207ENST00000488249 RTN4Q9NQC3 1192 aaKnown RBP8.95□□□□□ -0.98
RBM28-207ENST00000488249 EVX2Q03828 476 aa8.94□□□□□ -0.98
RBM28-207ENST00000488249 PKD2Q13563 968 aa8.94□□□□□ -0.98
RBM28-207ENST00000488249 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
RBM28-207ENST00000488249 SP7Q8TDD2 431 aaPredicted RBP8.93□□□□□ -0.98
RBM28-207ENST00000488249 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
RBM28-207ENST00000488249 ZNF579Q8NAF0 562 aaKnown RBP8.9□□□□□ -0.98
RBM28-207ENST00000488249 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
RBM28-207ENST00000488249 PYGBP11216 843 aa8.89□□□□□ -0.99
RBM28-207ENST00000488249 CHRM1P11229 460 aaPredicted RBP8.88□□□□□ -0.99
RBM28-207ENST00000488249 PHF12Q96QT6 1004 aa8.88□□□□□ -0.99
RBM28-207ENST00000488249 KIF12Q96FN5 646 aa8.86□□□□□ -0.99
RBM28-207ENST00000488249 MAP3K13O43283 966 aa8.83□□□□□ -1
RBM28-207ENST00000488249 SGIP1Q9BQI5 828 aa8.82□□□□□ -1
RBM28-207ENST00000488249 CLCN6P51797 869 aa8.81□□□□□ -1
RBM28-207ENST00000488249 PCDHB13Q9Y5F0 798 aa8.81□□□□□ -1
RBM28-207ENST00000488249 RGL2O15211 777 aa8.8□□□□□ -1
RBM28-207ENST00000488249 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
RBM28-207ENST00000488249 RNF25Q96BH1 459 aaPredicted RBP8.78□□□□□ -1
RBM28-207ENST00000488249 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
RBM28-207ENST00000488249 GABBR2O75899 941 aa8.77□□□□□ -1.01
RBM28-207ENST00000488249 IFNL1Q8IU54 200 aa8.77□□□□□ -1.01
RBM28-207ENST00000488249 PCDHB8Q9UN66 801 aa8.77□□□□□ -1.01
RBM28-207ENST00000488249 RIOK3O14730 519 aaKnown RBP8.76□□□□□ -1.01
RBM28-207ENST00000488249 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
RBM28-207ENST00000488249 TAOK2Q9UL54 1235 aa8.72□□□□□ -1.01
RBM28-207ENST00000488249 VGFO15240 615 aaPredicted RBP8.71□□□□□ -1.02
RBM28-207ENST00000488249 DCAF8L2P0C7V8 631 aa8.7□□□□□ -1.02
RBM28-207ENST00000488249 PDAP1Q13442 181 aaKnown RBP8.7□□□□□ -1.02
RBM28-207ENST00000488249 TRPC6Q9Y210 931 aa8.7□□□□□ -1.02
RBM28-207ENST00000488249 PSEN1P49768 467 aa8.69□□□□□ -1.02
RBM28-207ENST00000488249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.67□□□□□ -1.02
RBM28-207ENST00000488249 TIE1P35590 1138 aa8.67□□□□□ -1.02
RBM28-207ENST00000488249 ZFP91Q96JP5 570 aaPredicted RBP8.67□□□□□ -1.02
RBM28-207ENST00000488249 DCBLD2Q96PD2 775 aa8.64□□□□□ -1.03
RBM28-207ENST00000488249 TMEM106CQ9BVX2 250 aa8.64□□□□□ -1.03
RBM28-207ENST00000488249 BMP2KQ9NSY1 1161 aaPredicted RBP8.64□□□□□ -1.03
RBM28-207ENST00000488249 TTLL13PA6NNM8 815 aa8.63□□□□□ -1.03
RBM28-207ENST00000488249 STK25O00506 426 aa8.62□□□□□ -1.03
RBM28-207ENST00000488249 CHGAP10645 457 aaKnown RBP8.62□□□□□ -1.03
RBM28-207ENST00000488249 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
RBM28-207ENST00000488249 ASTLQ6HA08 431 aaPredicted RBP8.61□□□□□ -1.03
RBM28-207ENST00000488249 HS6ST3Q8IZP7 471 aa8.61□□□□□ -1.03
RBM28-207ENST00000488249 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
RBM28-207ENST00000488249 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
RBM28-207ENST00000488249 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
RBM28-207ENST00000488249 POTEIP0CG38 1075 aa8.58□□□□□ -1.04
RBM28-207ENST00000488249 CABP2Q9NPB3 220 aa8.57□□□□□ -1.04
RBM28-207ENST00000488249 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
RBM28-207ENST00000488249 GOLGA2Q08379 1002 aa8.55□□□□□ -1.04
RBM28-207ENST00000488249 PELP1Q8IZL8 1130 aaKnown RBP8.55□□□□□ -1.04
RBM28-207ENST00000488249 DNAJC5Q9H3Z4 198 aa8.55□□□□□ -1.04
RBM28-207ENST00000488249 EFCAB3Q8N7B9 438 aa8.53□□□□□ -1.04
RBM28-207ENST00000488249 MKRN3Q13064 507 aaKnown RBP8.52□□□□□ -1.05
RBM28-207ENST00000488249 BBXQ8WY36 941 aaPredicted RBP8.52□□□□□ -1.05
RBM28-207ENST00000488249 IER5LQ5T953 404 aa8.5□□□□□ -1.05
RBM28-207ENST00000488249 SOX12O15370 315 aa8.49□□□□□ -1.05
RBM28-207ENST00000488249 NKX1-1Q15270 411 aaPredicted RBP8.49□□□□□ -1.05
RBM28-207ENST00000488249 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
RBM28-207ENST00000488249 C7P10643 843 aa8.47□□□□□ -1.05
RBM28-207ENST00000488249 MFRPQ9BY79 579 aa8.46□□□□□ -1.06
RBM28-207ENST00000488249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.46□□□□□ -1.061e-6■■■■□ 22.2
RBM28-207ENST00000488249 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.06
RBM28-207ENST00000488249 METRNQ9UJH8 293 aa8.46□□□□□ -1.06
RBM28-207ENST00000488249 PHF8Q9UPP1 1060 aa8.46□□□□□ -1.06
RBM28-207ENST00000488249 NLRP6P59044 892 aa8.45□□□□□ -1.06
RBM28-207ENST00000488249 IRX5P78411 483 aaPredicted RBP8.45□□□□□ -1.06
RBM28-207ENST00000488249 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
RBM28-207ENST00000488249 SEC24BO95487 1268 aa8.43□□□□□ -1.06
RBM28-207ENST00000488249 FBXO22Q8NEZ5 403 aa8.43□□□□□ -1.06
RBM28-207ENST00000488249 OCEL1Q9H607 264 aa8.43□□□□□ -1.06
RBM28-207ENST00000488249 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
RBM28-207ENST00000488249 PLCG2P16885 1265 aa8.42□□□□□ -1.06
RBM28-207ENST00000488249 RYDENQ9NUL5 291 aaKnown RBP8.42□□□□□ -1.06
RBM28-207ENST00000488249 COLQQ9Y215 455 aaPredicted RBP8.42□□□□□ -1.06
RBM28-207ENST00000488249 GTPBP6O43824 516 aaPredicted RBP8.41□□□□□ -1.06
RBM28-207ENST00000488249 PDCD7Q8N8D1 485 aaKnown RBP8.41□□□□□ -1.06
RBM28-207ENST00000488249 MS4A4AQ96JQ5 239 aa8.41□□□□□ -1.06
RBM28-207ENST00000488249 SPRYD3Q8NCJ5 442 aa8.4□□□□□ -1.06
RBM28-207ENST00000488249 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
RBM28-207ENST00000488249 CFAP44Q96MT7 982 aa8.38□□□□□ -1.07
RBM28-207ENST00000488249 PLSCR2Q9NRY7 297 aa8.38□□□□□ -1.07
RBM28-207ENST00000488249 LHX8Q68G74 356 aa8.37□□□□□ -1.07
RBM28-207ENST00000488249 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
RBM28-207ENST00000488249 PPP1R37O75864 691 aa8.35□□□□□ -1.07
RBM28-207ENST00000488249 PLCB2Q00722 1185 aa8.35□□□□□ -1.07
RBM28-207ENST00000488249 L3MBTL3Q96JM7 780 aaPredicted RBP8.33□□□□□ -1.08
RBM28-207ENST00000488249 POTEB2H3BUK9 544 aa8.31□□□□□ -1.08
RBM28-207ENST00000488249 G3V3G9 751 aa8.3□□□□□ -1.08
RBM28-207ENST00000488249 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
RBM28-207ENST00000488249 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
RBM28-207ENST00000488249 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
RBM28-207ENST00000488249 POTEJP0CG39 1038 aa8.28□□□□□ -1.08
RBM28-207ENST00000488249 MAMSTRQ6ZN01 415 aa8.23□□□□□ -1.09
RBM28-207ENST00000488249 C3orf67Q6ZVT6 689 aa8.23□□□□□ -1.09
RBM28-207ENST00000488249 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
RBM28-207ENST00000488249 HAP1P54257 671 aaPredicted RBP8.22□□□□□ -1.09
RBM28-207ENST00000488249 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.22□□□□□ -1.09
RBM28-207ENST00000488249 SCUBE2Q9NQ36 999 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms