RNA–Protein interactions for RNA: ENST00000488089.1

LAMA1-204, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 4,577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-204ENST00000488089 A0A0G2JS52 829 aa12.59□□□□□ -0.39
LAMA1-204ENST00000488089 MIER1Q8N108 512 aa12.57□□□□□ -0.4
LAMA1-204ENST00000488089 TMC1Q8TDI8 760 aa12.57□□□□□ -0.4
LAMA1-204ENST00000488089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
LAMA1-204ENST00000488089 CDCA8Q53HL2 280 aa12.56□□□□□ -0.4
LAMA1-204ENST00000488089 PLEKHD1A6NEE1 506 aa12.55□□□□□ -0.4
LAMA1-204ENST00000488089 SOGA1O94964 1423 aa12.55□□□□□ -0.4
LAMA1-204ENST00000488089 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
LAMA1-204ENST00000488089 MTUS2Q5JR59 1369 aa12.53□□□□□ -0.4
LAMA1-204ENST00000488089 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.4
LAMA1-204ENST00000488089 WIZO95785 1651 aa12.51□□□□□ -0.41
LAMA1-204ENST00000488089 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
LAMA1-204ENST00000488089 ARID4BQ4LE39 1312 aaPredicted RBP12.5□□□□□ -0.41
LAMA1-204ENST00000488089 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
LAMA1-204ENST00000488089 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
LAMA1-204ENST00000488089 TOP2AP11388 1531 aaKnown RBP12.48□□□□□ -0.41
LAMA1-204ENST00000488089 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
LAMA1-204ENST00000488089 ANP32EQ9BTT0 268 aa12.46□□□□□ -0.41
LAMA1-204ENST00000488089 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
LAMA1-204ENST00000488089 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
LAMA1-204ENST00000488089 NCLP19338 710 aaKnown RBP12.45□□□□□ -0.42
LAMA1-204ENST00000488089 CHMP4BQ9H444 224 aaKnown RBP12.45□□□□□ -0.42
LAMA1-204ENST00000488089 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
LAMA1-204ENST00000488089 VPS8Q8N3P4 1428 aa12.43□□□□□ -0.42
LAMA1-204ENST00000488089 FKBP8Q14318 412 aa12.42□□□□□ -0.42
LAMA1-204ENST00000488089 CHIC2Q9UKJ5 165 aa12.42□□□□□ -0.42
LAMA1-204ENST00000488089 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
LAMA1-204ENST00000488089 ZRSR1Q15695 479 aaKnown RBP12.41□□□□□ -0.42
LAMA1-204ENST00000488089 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
LAMA1-204ENST00000488089 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
LAMA1-204ENST00000488089 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
LAMA1-204ENST00000488089 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
LAMA1-204ENST00000488089 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
LAMA1-204ENST00000488089 NPHP1O15259 732 aa12.39□□□□□ -0.43
LAMA1-204ENST00000488089 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
LAMA1-204ENST00000488089 GOLGA6L22H0YM25 854 aa12.38□□□□□ -0.43
LAMA1-204ENST00000488089 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
LAMA1-204ENST00000488089 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
LAMA1-204ENST00000488089 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
LAMA1-204ENST00000488089 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
LAMA1-204ENST00000488089 BECN1Q14457 450 aa12.35□□□□□ -0.43
LAMA1-204ENST00000488089 ARXQ96QS3 562 aa12.35□□□□□ -0.43
LAMA1-204ENST00000488089 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
LAMA1-204ENST00000488089 MS4A1P11836 297 aa12.34□□□□□ -0.43
LAMA1-204ENST00000488089 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
LAMA1-204ENST00000488089 CHMP4AQ9BY43 222 aa12.33□□□□□ -0.43
LAMA1-204ENST00000488089 CCNB3Q8WWL7 1395 aa12.33□□□□□ -0.43
LAMA1-204ENST00000488089 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
LAMA1-204ENST00000488089 POGKQ9P215 609 aa12.33□□□□□ -0.44
LAMA1-204ENST00000488089 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
LAMA1-204ENST00000488089 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
LAMA1-204ENST00000488089 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
LAMA1-204ENST00000488089 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
LAMA1-204ENST00000488089 LMOD2Q6P5Q4 547 aa12.3□□□□□ -0.44
LAMA1-204ENST00000488089 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
LAMA1-204ENST00000488089 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.44
LAMA1-204ENST00000488089 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
LAMA1-204ENST00000488089 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
LAMA1-204ENST00000488089 NRDCO43847 1150 aa12.26□□□□□ -0.45
LAMA1-204ENST00000488089 KANK1Q14678 1352 aa12.25□□□□□ -0.45
LAMA1-204ENST00000488089 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
LAMA1-204ENST00000488089 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
LAMA1-204ENST00000488089 RUSC2Q8N2Y8 1516 aa12.25□□□□□ -0.45
LAMA1-204ENST00000488089 CUX2O14529 1486 aa12.24□□□□□ -0.45
LAMA1-204ENST00000488089 KANK4Q5T7N3 995 aaPredicted RBP12.24□□□□□ -0.45
LAMA1-204ENST00000488089 CARMIL1Q5VZK9 1371 aa12.24□□□□□ -0.45
LAMA1-204ENST00000488089 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
LAMA1-204ENST00000488089 RGL3Q3MIN7 710 aa12.23□□□□□ -0.45
LAMA1-204ENST00000488089 TIMELESSQ9UNS1 1208 aa12.23□□□□□ -0.45
LAMA1-204ENST00000488089 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
LAMA1-204ENST00000488089 TMX4Q9H1E5 349 aaPredicted RBP12.22□□□□□ -0.45
LAMA1-204ENST00000488089 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
LAMA1-204ENST00000488089 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
LAMA1-204ENST00000488089 FGD1P98174 961 aa12.21□□□□□ -0.45
LAMA1-204ENST00000488089 RRP7BPQ9NSQ0 103 aa12.21□□□□□ -0.45
LAMA1-204ENST00000488089 ATAD2BQ9ULI0 1458 aa12.2□□□□□ -0.46
LAMA1-204ENST00000488089 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
LAMA1-204ENST00000488089 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
LAMA1-204ENST00000488089 GOLGA6L6A8MZA4 724 aa12.19□□□□□ -0.46
LAMA1-204ENST00000488089 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
LAMA1-204ENST00000488089 L1TD1Q5T7N2 865 aaKnown RBP12.19□□□□□ -0.46
LAMA1-204ENST00000488089 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
LAMA1-204ENST00000488089 OS9Q13438 667 aaPredicted RBP12.18□□□□□ -0.46
LAMA1-204ENST00000488089 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
LAMA1-204ENST00000488089 KCNJ4P48050 445 aa12.15□□□□□ -0.46
LAMA1-204ENST00000488089 RAB3GAP2Q9H2M9 1393 aa12.15□□□□□ -0.46
LAMA1-204ENST00000488089 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
LAMA1-204ENST00000488089 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
LAMA1-204ENST00000488089 CALD1Q05682 793 aaKnown RBP12.12□□□□□ -0.47
LAMA1-204ENST00000488089 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
LAMA1-204ENST00000488089 TMF1P82094 1093 aa12.12□□□□□ -0.47
LAMA1-204ENST00000488089 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
LAMA1-204ENST00000488089 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
LAMA1-204ENST00000488089 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
LAMA1-204ENST00000488089 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
LAMA1-204ENST00000488089 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
LAMA1-204ENST00000488089 MCCP23508 829 aa12.09□□□□□ -0.47
LAMA1-204ENST00000488089 GOLGA6L4A6NEF3 574 aa12.09□□□□□ -0.47
LAMA1-204ENST00000488089 HDGFL2Q7Z4V5 671 aaPredicted RBP12.09□□□□□ -0.47
LAMA1-204ENST00000488089 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms