RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NUBP1P53384 320 aa13.56□□□□□ -0.24
CCDC66-221ENST00000487739 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
CCDC66-221ENST00000487739 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
CCDC66-221ENST00000487739 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
CCDC66-221ENST00000487739 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
CCDC66-221ENST00000487739 MS4A3Q96HJ5 214 aa13.49□□□□□ -0.25
CCDC66-221ENST00000487739 KIF12Q96FN5 646 aa13.47□□□□□ -0.25
CCDC66-221ENST00000487739 MAP3K13O43283 966 aa13.41□□□□□ -0.26
CCDC66-221ENST00000487739 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
CCDC66-221ENST00000487739 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
CCDC66-221ENST00000487739 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
CCDC66-221ENST00000487739 PCDHB13Q9Y5F0 798 aa13.34□□□□□ -0.27
CCDC66-221ENST00000487739 GSE1Q14687 1217 aa13.33□□□□□ -0.28
CCDC66-221ENST00000487739 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
CCDC66-221ENST00000487739 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
CCDC66-221ENST00000487739 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
CCDC66-221ENST00000487739 LHX8Q68G74 356 aa13.3□□□□□ -0.28
CCDC66-221ENST00000487739 PYGBP11216 843 aa13.28□□□□□ -0.28
CCDC66-221ENST00000487739 TIE1P35590 1138 aa13.28□□□□□ -0.28
CCDC66-221ENST00000487739 TRPC6Q9Y210 931 aa13.27□□□□□ -0.29
CCDC66-221ENST00000487739 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
CCDC66-221ENST00000487739 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
CCDC66-221ENST00000487739 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
CCDC66-221ENST00000487739 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
CCDC66-221ENST00000487739 SLC39A7Q92504 469 aa13.22□□□□□ -0.29
CCDC66-221ENST00000487739 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
CCDC66-221ENST00000487739 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
CCDC66-221ENST00000487739 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
CCDC66-221ENST00000487739 C7P10643 843 aa13.19□□□□□ -0.3
CCDC66-221ENST00000487739 CHRM1P11229 460 aaPredicted RBP13.17□□□□□ -0.3
CCDC66-221ENST00000487739 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
CCDC66-221ENST00000487739 TMEM106CQ9BVX2 250 aa13.13□□□□□ -0.31
CCDC66-221ENST00000487739 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
CCDC66-221ENST00000487739 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CCDC66-221ENST00000487739 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
CCDC66-221ENST00000487739 POTEB2H3BUK9 544 aa13.07□□□□□ -0.32
CCDC66-221ENST00000487739 IER5LQ5T953 404 aa13.06□□□□□ -0.32
CCDC66-221ENST00000487739 SEC24BO95487 1268 aa13.02□□□□□ -0.33
CCDC66-221ENST00000487739 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
CCDC66-221ENST00000487739 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
CCDC66-221ENST00000487739 PSEN1P49768 467 aa12.98□□□□□ -0.33
CCDC66-221ENST00000487739 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
CCDC66-221ENST00000487739 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
CCDC66-221ENST00000487739 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
CCDC66-221ENST00000487739 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
CCDC66-221ENST00000487739 PLCG2P16885 1265 aa12.93□□□□□ -0.34
CCDC66-221ENST00000487739 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
CCDC66-221ENST00000487739 POTEJP0CG39 1038 aa12.92□□□□□ -0.34
CCDC66-221ENST00000487739 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CCDC66-221ENST00000487739 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
CCDC66-221ENST00000487739 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
CCDC66-221ENST00000487739 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
CCDC66-221ENST00000487739 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
CCDC66-221ENST00000487739 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
CCDC66-221ENST00000487739 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
CCDC66-221ENST00000487739 VGFO15240 615 aaPredicted RBP12.8□□□□□ -0.36
CCDC66-221ENST00000487739 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-221ENST00000487739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC66-221ENST00000487739 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
CCDC66-221ENST00000487739 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
CCDC66-221ENST00000487739 PKD2Q13563 968 aa12.75□□□□□ -0.37
CCDC66-221ENST00000487739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
CCDC66-221ENST00000487739 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
CCDC66-221ENST00000487739 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
CCDC66-221ENST00000487739 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
CCDC66-221ENST00000487739 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
CCDC66-221ENST00000487739 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
CCDC66-221ENST00000487739 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
CCDC66-221ENST00000487739 RGL2O15211 777 aa12.65□□□□□ -0.38
CCDC66-221ENST00000487739 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
CCDC66-221ENST00000487739 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
CCDC66-221ENST00000487739 G3V3G9 751 aa12.62□□□□□ -0.39
CCDC66-221ENST00000487739 SOX12O15370 315 aa12.62□□□□□ -0.39
CCDC66-221ENST00000487739 STK25O00506 426 aa12.61□□□□□ -0.39
CCDC66-221ENST00000487739 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
CCDC66-221ENST00000487739 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
CCDC66-221ENST00000487739 BOLA1Q9Y3E2 137 aa12.59□□□□□ -0.39
CCDC66-221ENST00000487739 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
CCDC66-221ENST00000487739 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
CCDC66-221ENST00000487739 NLRP6P59044 892 aa12.52□□□□□ -0.41
CCDC66-221ENST00000487739 MS4A4AQ96JQ5 239 aa12.51□□□□□ -0.41
CCDC66-221ENST00000487739 POTEMA6NI47 508 aa12.5□□□□□ -0.41
CCDC66-221ENST00000487739 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
CCDC66-221ENST00000487739 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
CCDC66-221ENST00000487739 SNPHO15079 494 aa12.49□□□□□ -0.41
CCDC66-221ENST00000487739 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
CCDC66-221ENST00000487739 FBXO22Q8NEZ5 403 aa12.47□□□□□ -0.41
CCDC66-221ENST00000487739 MICALL2Q8IY33 904 aa12.46□□□□□ -0.41
CCDC66-221ENST00000487739 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
CCDC66-221ENST00000487739 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
CCDC66-221ENST00000487739 ST18O60284 1047 aa12.41□□□□□ -0.42
CCDC66-221ENST00000487739 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
CCDC66-221ENST00000487739 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
CCDC66-221ENST00000487739 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
CCDC66-221ENST00000487739 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
CCDC66-221ENST00000487739 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
CCDC66-221ENST00000487739 HOXB3P14651 431 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-221ENST00000487739 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
CCDC66-221ENST00000487739 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
CCDC66-221ENST00000487739 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms