RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
RBM39-234ENST00000487604 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
RBM39-234ENST00000487604 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
RBM39-234ENST00000487604 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
RBM39-234ENST00000487604 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
RBM39-234ENST00000487604 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
RBM39-234ENST00000487604 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
RBM39-234ENST00000487604 MAP3K13O43283 966 aa12.36□□□□□ -0.43
RBM39-234ENST00000487604 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
RBM39-234ENST00000487604 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
RBM39-234ENST00000487604 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
RBM39-234ENST00000487604 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
RBM39-234ENST00000487604 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
RBM39-234ENST00000487604 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
RBM39-234ENST00000487604 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
RBM39-234ENST00000487604 SGIP1Q9BQI5 828 aa12.26□□□□□ -0.45
RBM39-234ENST00000487604 PCDHB13Q9Y5F0 798 aa12.25□□□□□ -0.45
RBM39-234ENST00000487604 LHX8Q68G74 356 aa12.24□□□□□ -0.45
RBM39-234ENST00000487604 PYGBP11216 843 aa12.23□□□□□ -0.45
RBM39-234ENST00000487604 GSE1Q14687 1217 aa12.22□□□□□ -0.45
RBM39-234ENST00000487604 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
RBM39-234ENST00000487604 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
RBM39-234ENST00000487604 ATN1P54259 1190 aaPredicted RBP12.19□□□□□ -0.46
RBM39-234ENST00000487604 TIE1P35590 1138 aa12.18□□□□□ -0.46
RBM39-234ENST00000487604 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
RBM39-234ENST00000487604 CHRM1P11229 460 aaPredicted RBP12.14□□□□□ -0.47
RBM39-234ENST00000487604 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
RBM39-234ENST00000487604 C7P10643 843 aa12.13□□□□□ -0.47
RBM39-234ENST00000487604 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
RBM39-234ENST00000487604 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
RBM39-234ENST00000487604 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
RBM39-234ENST00000487604 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
RBM39-234ENST00000487604 TMEM106CQ9BVX2 250 aa12.08□□□□□ -0.48
RBM39-234ENST00000487604 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
RBM39-234ENST00000487604 ZNF467Q7Z7K2 595 aaPredicted RBP12.04□□□□□ -0.48
RBM39-234ENST00000487604 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
RBM39-234ENST00000487604 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
RBM39-234ENST00000487604 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
RBM39-234ENST00000487604 IER5LQ5T953 404 aa11.98□□□□□ -0.49
RBM39-234ENST00000487604 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
RBM39-234ENST00000487604 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
RBM39-234ENST00000487604 PSEN1P49768 467 aa11.95□□□□□ -0.5
RBM39-234ENST00000487604 SEC24BO95487 1268 aa11.94□□□□□ -0.5
RBM39-234ENST00000487604 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
RBM39-234ENST00000487604 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
RBM39-234ENST00000487604 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
RBM39-234ENST00000487604 PLCG2P16885 1265 aa11.85□□□□□ -0.51
RBM39-234ENST00000487604 RNF25Q96BH1 459 aaPredicted RBP11.85□□□□□ -0.51
RBM39-234ENST00000487604 OCEL1Q9H607 264 aa11.85□□□□□ -0.51
RBM39-234ENST00000487604 RIOK3O14730 519 aaKnown RBP11.83□□□□□ -0.52
RBM39-234ENST00000487604 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
RBM39-234ENST00000487604 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
RBM39-234ENST00000487604 SCUBE2Q9NQ36 999 aa11.8□□□□□ -0.52
RBM39-234ENST00000487604 PKD2Q13563 968 aa11.79□□□□□ -0.52
RBM39-234ENST00000487604 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
RBM39-234ENST00000487604 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
RBM39-234ENST00000487604 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
RBM39-234ENST00000487604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.531e-30■■□□□ 12.9
RBM39-234ENST00000487604 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
RBM39-234ENST00000487604 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
RBM39-234ENST00000487604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
RBM39-234ENST00000487604 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
RBM39-234ENST00000487604 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
RBM39-234ENST00000487604 RGL2O15211 777 aa11.68□□□□□ -0.54
RBM39-234ENST00000487604 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
RBM39-234ENST00000487604 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
RBM39-234ENST00000487604 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
RBM39-234ENST00000487604 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
RBM39-234ENST00000487604 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
RBM39-234ENST00000487604 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.61□□□□□ -0.55
RBM39-234ENST00000487604 SOX12O15370 315 aa11.6□□□□□ -0.55
RBM39-234ENST00000487604 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
RBM39-234ENST00000487604 STK25O00506 426 aa11.58□□□□□ -0.56
RBM39-234ENST00000487604 FAM163AQ96GL9 167 aaPredicted RBP11.58□□□□□ -0.56
RBM39-234ENST00000487604 BOLA1Q9Y3E2 137 aa11.57□□□□□ -0.56
RBM39-234ENST00000487604 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
RBM39-234ENST00000487604 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
RBM39-234ENST00000487604 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
RBM39-234ENST00000487604 MS4A4AQ96JQ5 239 aa11.55□□□□□ -0.56
RBM39-234ENST00000487604 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
RBM39-234ENST00000487604 G3V3G9 751 aa11.51□□□□□ -0.57
RBM39-234ENST00000487604 NLRP6P59044 892 aa11.5□□□□□ -0.57
RBM39-234ENST00000487604 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
RBM39-234ENST00000487604 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
RBM39-234ENST00000487604 POTEMA6NI47 508 aa11.48□□□□□ -0.57
RBM39-234ENST00000487604 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
RBM39-234ENST00000487604 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
RBM39-234ENST00000487604 ST18O60284 1047 aa11.44□□□□□ -0.58
RBM39-234ENST00000487604 SNPHO15079 494 aa11.43□□□□□ -0.58
RBM39-234ENST00000487604 HS6ST3Q8IZP7 471 aa11.43□□□□□ -0.58
RBM39-234ENST00000487604 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
RBM39-234ENST00000487604 TMEM92Q6UXU6 159 aa11.39□□□□□ -0.59
RBM39-234ENST00000487604 PPP1R37O75864 691 aa11.33□□□□□ -0.6
RBM39-234ENST00000487604 HOXB3P14651 431 aaPredicted RBP11.33□□□□□ -0.6
RBM39-234ENST00000487604 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
RBM39-234ENST00000487604 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
RBM39-234ENST00000487604 MARVELD3Q96A59 401 aa11.29□□□□□ -0.6
RBM39-234ENST00000487604 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
RBM39-234ENST00000487604 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
RBM39-234ENST00000487604 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms