RNA–Protein interactions for RNA: ENST00000487600.1

NKRF-203, Transcript of NFKB repressing factor, humanhuman

TSL 5

Gene NKRF, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-203ENST00000487600 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
NKRF-203ENST00000487600 MS4A3Q96HJ5 214 aa18.25■□□□□ 0.51
NKRF-203ENST00000487600 RASEFQ8IZ41 740 aa18.24■□□□□ 0.51
NKRF-203ENST00000487600 KIF12Q96FN5 646 aa18.17■□□□□ 0.5
NKRF-203ENST00000487600 NUBP1P53384 320 aa18.12■□□□□ 0.49
NKRF-203ENST00000487600 FAM212AQ96EL1 285 aa18.12■□□□□ 0.49
NKRF-203ENST00000487600 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
NKRF-203ENST00000487600 MAP3K13O43283 966 aa18.07■□□□□ 0.48
NKRF-203ENST00000487600 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
NKRF-203ENST00000487600 SLC39A7Q92504 469 aa18.03■□□□□ 0.48
NKRF-203ENST00000487600 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
NKRF-203ENST00000487600 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
NKRF-203ENST00000487600 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
NKRF-203ENST00000487600 SGIP1Q9BQI5 828 aa18.01■□□□□ 0.47
NKRF-203ENST00000487600 C7P10643 843 aa17.99■□□□□ 0.47
NKRF-203ENST00000487600 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
NKRF-203ENST00000487600 PCDHB13Q9Y5F0 798 aa17.98■□□□□ 0.47
NKRF-203ENST00000487600 METRNQ9UJH8 293 aa17.97■□□□□ 0.47
NKRF-203ENST00000487600 POTEB2H3BUK9 544 aa17.96■□□□□ 0.47
NKRF-203ENST00000487600 TIE1P35590 1138 aa17.96■□□□□ 0.47
NKRF-203ENST00000487600 ATN1P54259 1190 aaPredicted RBP17.93■□□□□ 0.46
NKRF-203ENST00000487600 BMP2KQ9NSY1 1161 aaPredicted RBP17.92■□□□□ 0.46
NKRF-203ENST00000487600 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
NKRF-203ENST00000487600 OTUD5Q96G74 571 aa17.85■□□□□ 0.45
NKRF-203ENST00000487600 GSE1Q14687 1217 aa17.83■□□□□ 0.44
NKRF-203ENST00000487600 TTLL13PA6NNM8 815 aa17.82■□□□□ 0.44
NKRF-203ENST00000487600 IFNL1Q8IU54 200 aa17.81■□□□□ 0.44
NKRF-203ENST00000487600 PYGBP11216 843 aa17.79■□□□□ 0.44
NKRF-203ENST00000487600 MAMSTRQ6ZN01 415 aa17.76■□□□□ 0.43
NKRF-203ENST00000487600 SEC24BO95487 1268 aa17.74■□□□□ 0.43
NKRF-203ENST00000487600 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
NKRF-203ENST00000487600 TMEM106CQ9BVX2 250 aa17.72■□□□□ 0.43
NKRF-203ENST00000487600 POTEJP0CG39 1038 aa17.69■□□□□ 0.42
NKRF-203ENST00000487600 IER5LQ5T953 404 aa17.69■□□□□ 0.42
NKRF-203ENST00000487600 SPOCK2Q92563 424 aa17.69■□□□□ 0.42
NKRF-203ENST00000487600 SCUBE2Q9NQ36 999 aa17.66■□□□□ 0.42
NKRF-203ENST00000487600 IFNLR1Q8IU57 520 aaPredicted RBP17.65■□□□□ 0.42
NKRF-203ENST00000487600 ZNF467Q7Z7K2 595 aaPredicted RBP17.62■□□□□ 0.41
NKRF-203ENST00000487600 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
NKRF-203ENST00000487600 POTEFA5A3E0 1075 aa17.6■□□□□ 0.41
NKRF-203ENST00000487600 CHRM1P11229 460 aaPredicted RBP17.59■□□□□ 0.41
NKRF-203ENST00000487600 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
NKRF-203ENST00000487600 COLQQ9Y215 455 aaPredicted RBP17.57■□□□□ 0.4
NKRF-203ENST00000487600 PLCG2P16885 1265 aa17.54■□□□□ 0.4
NKRF-203ENST00000487600 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
NKRF-203ENST00000487600 OCEL1Q9H607 264 aa17.43■□□□□ 0.38
NKRF-203ENST00000487600 IRX5P78411 483 aaPredicted RBP17.42■□□□□ 0.38
NKRF-203ENST00000487600 PSEN1P49768 467 aa17.41■□□□□ 0.38
NKRF-203ENST00000487600 MKRN3Q13064 507 aaKnown RBP17.4■□□□□ 0.38
NKRF-203ENST00000487600 TRIM41Q8WV44 630 aa17.4■□□□□ 0.38
NKRF-203ENST00000487600 POTEMA6NI47 508 aa17.38■□□□□ 0.37
NKRF-203ENST00000487600 PDAP1Q13442 181 aaKnown RBP17.38■□□□□ 0.37
NKRF-203ENST00000487600 PLSCR2Q9NRY7 297 aa17.35■□□□□ 0.37
NKRF-203ENST00000487600 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
NKRF-203ENST00000487600 LCE2DQ5TA82 110 aaPredicted RBP17.31■□□□□ 0.36
NKRF-203ENST00000487600 FAM163AQ96GL9 167 aaPredicted RBP17.3■□□□□ 0.36
NKRF-203ENST00000487600 SLAIN1Q8ND83 568 aa17.28■□□□□ 0.36
NKRF-203ENST00000487600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.24■□□□□ 0.35
NKRF-203ENST00000487600 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
NKRF-203ENST00000487600 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.21■□□□□ 0.35
NKRF-203ENST00000487600 CABP2Q9NPB3 220 aa17.2■□□□□ 0.34
NKRF-203ENST00000487600 PDCD7Q8N8D1 485 aaKnown RBP17.17■□□□□ 0.34
NKRF-203ENST00000487600 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
NKRF-203ENST00000487600 G3V3G9 751 aa17.1■□□□□ 0.33
NKRF-203ENST00000487600 PCDH10Q9P2E7 1040 aa17.1■□□□□ 0.33
NKRF-203ENST00000487600 RIOK3O14730 519 aaKnown RBP17.09■□□□□ 0.33
NKRF-203ENST00000487600 SNPHO15079 494 aa17.07■□□□□ 0.32
NKRF-203ENST00000487600 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
NKRF-203ENST00000487600 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
NKRF-203ENST00000487600 TAOK2Q9UL54 1235 aa17.02■□□□□ 0.32
NKRF-203ENST00000487600 EFCAB3Q8N7B9 438 aa16.98■□□□□ 0.31
NKRF-203ENST00000487600 ST18O60284 1047 aa16.96■□□□□ 0.31
NKRF-203ENST00000487600 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.31
NKRF-203ENST00000487600 BOLA1Q9Y3E2 137 aa16.96■□□□□ 0.31
NKRF-203ENST00000487600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.95■□□□□ 0.3
NKRF-203ENST00000487600 RNF25Q96BH1 459 aaPredicted RBP16.95■□□□□ 0.3
NKRF-203ENST00000487600 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
NKRF-203ENST00000487600 SOX12O15370 315 aa16.9■□□□□ 0.3
NKRF-203ENST00000487600 TMEM121BQ9BXQ6 578 aaPredicted RBP16.9■□□□□ 0.3
NKRF-203ENST00000487600 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
NKRF-203ENST00000487600 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
NKRF-203ENST00000487600 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
NKRF-203ENST00000487600 STK24Q9Y6E0 443 aa16.78■□□□□ 0.28
NKRF-203ENST00000487600 PHF8Q9UPP1 1060 aa16.75■□□□□ 0.27
NKRF-203ENST00000487600 STK25O00506 426 aa16.74■□□□□ 0.27
NKRF-203ENST00000487600 NLRP6P59044 892 aa16.74■□□□□ 0.27
NKRF-203ENST00000487600 PKD2Q13563 968 aa16.71■□□□□ 0.27
NKRF-203ENST00000487600 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
NKRF-203ENST00000487600 MARVELD3Q96A59 401 aa16.7■□□□□ 0.26
NKRF-203ENST00000487600 EMP3P54852 163 aa16.68■□□□□ 0.26
NKRF-203ENST00000487600 MS4A4AQ96JQ5 239 aa16.67■□□□□ 0.26
NKRF-203ENST00000487600 ZNF710Q8N1W2 664 aa16.66■□□□□ 0.26
NKRF-203ENST00000487600 RGL2O15211 777 aa16.65■□□□□ 0.26
NKRF-203ENST00000487600 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
NKRF-203ENST00000487600 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
NKRF-203ENST00000487600 FBXO22Q8NEZ5 403 aa16.58■□□□□ 0.24
NKRF-203ENST00000487600 HOXB3P14651 431 aaPredicted RBP16.57■□□□□ 0.24
NKRF-203ENST00000487600 MFRPQ9BY79 579 aa16.55■□□□□ 0.24
NKRF-203ENST00000487600 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
NKRF-203ENST00000487600 HOXB1P14653 301 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms