RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 NUBP1P53384 320 aa14.56□□□□□ -0.08
RAD50-207ENST00000487596 GALR2O43603 387 aaPredicted RBP14.53□□□□□ -0.08
RAD50-207ENST00000487596 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
RAD50-207ENST00000487596 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
RAD50-207ENST00000487596 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
RAD50-207ENST00000487596 POTEIP0CG38 1075 aa14.47□□□□□ -0.09
RAD50-207ENST00000487596 MS4A3Q96HJ5 214 aa14.44□□□□□ -0.1
RAD50-207ENST00000487596 SGIP1Q9BQI5 828 aa14.43□□□□□ -0.1
RAD50-207ENST00000487596 MAP3K13O43283 966 aa14.37□□□□□ -0.11
RAD50-207ENST00000487596 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
RAD50-207ENST00000487596 GSE1Q14687 1217 aa14.36□□□□□ -0.11
RAD50-207ENST00000487596 ASTLQ6HA08 431 aaPredicted RBP14.33□□□□□ -0.12
RAD50-207ENST00000487596 IFNLR1Q8IU57 520 aaPredicted RBP14.33□□□□□ -0.12
RAD50-207ENST00000487596 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
RAD50-207ENST00000487596 LHX8Q68G74 356 aa14.3□□□□□ -0.12
RAD50-207ENST00000487596 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
RAD50-207ENST00000487596 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
RAD50-207ENST00000487596 TIE1P35590 1138 aa14.29□□□□□ -0.12
RAD50-207ENST00000487596 SLC39A7Q92504 469 aa14.23□□□□□ -0.13
RAD50-207ENST00000487596 C7P10643 843 aa14.22□□□□□ -0.13
RAD50-207ENST00000487596 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.13
RAD50-207ENST00000487596 PLSCR2Q9NRY7 297 aa14.21□□□□□ -0.13
RAD50-207ENST00000487596 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
RAD50-207ENST00000487596 PYGBP11216 843 aa14.2□□□□□ -0.14
RAD50-207ENST00000487596 IFNL1Q8IU54 200 aa14.2□□□□□ -0.14
RAD50-207ENST00000487596 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
RAD50-207ENST00000487596 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
RAD50-207ENST00000487596 TRPC6Q9Y210 931 aa14.16□□□□□ -0.14
RAD50-207ENST00000487596 TTLL13PA6NNM8 815 aa14.15□□□□□ -0.14
RAD50-207ENST00000487596 ZNF467Q7Z7K2 595 aaPredicted RBP14.14□□□□□ -0.15
RAD50-207ENST00000487596 METRNQ9UJH8 293 aa14.14□□□□□ -0.15
RAD50-207ENST00000487596 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
RAD50-207ENST00000487596 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
RAD50-207ENST00000487596 IER5LQ5T953 404 aa14.09□□□□□ -0.15
RAD50-207ENST00000487596 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
RAD50-207ENST00000487596 TRIM35Q9UPQ4 493 aa14.06□□□□□ -0.16
RAD50-207ENST00000487596 PCDHB8Q9UN66 801 aa14.05□□□□□ -0.16
RAD50-207ENST00000487596 SEC24BO95487 1268 aa13.99□□□□□ -0.17
RAD50-207ENST00000487596 MAMSTRQ6ZN01 415 aa13.99□□□□□ -0.17
RAD50-207ENST00000487596 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
RAD50-207ENST00000487596 PDAP1Q13442 181 aaKnown RBP13.95□□□□□ -0.18
RAD50-207ENST00000487596 PSEN1P49768 467 aa13.93□□□□□ -0.18
RAD50-207ENST00000487596 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
RAD50-207ENST00000487596 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
RAD50-207ENST00000487596 PLCG2P16885 1265 aa13.89□□□□□ -0.19
RAD50-207ENST00000487596 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
RAD50-207ENST00000487596 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
RAD50-207ENST00000487596 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
RAD50-207ENST00000487596 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
RAD50-207ENST00000487596 OCEL1Q9H607 264 aa13.86□□□□□ -0.19
RAD50-207ENST00000487596 MKRN3Q13064 507 aaKnown RBP13.85□□□□□ -0.19
RAD50-207ENST00000487596 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
RAD50-207ENST00000487596 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
RAD50-207ENST00000487596 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
RAD50-207ENST00000487596 VGFO15240 615 aaPredicted RBP13.75□□□□□ -0.21
RAD50-207ENST00000487596 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
RAD50-207ENST00000487596 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
RAD50-207ENST00000487596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.215e-7■■■■□ 25.8
RAD50-207ENST00000487596 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
RAD50-207ENST00000487596 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
RAD50-207ENST00000487596 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
RAD50-207ENST00000487596 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
RAD50-207ENST00000487596 PKD2Q13563 968 aa13.67□□□□□ -0.22
RAD50-207ENST00000487596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
RAD50-207ENST00000487596 ZFP91Q96JP5 570 aaPredicted RBP13.64□□□□□ -0.23
RAD50-207ENST00000487596 SOX12O15370 315 aa13.61□□□□□ -0.23
RAD50-207ENST00000487596 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
RAD50-207ENST00000487596 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
RAD50-207ENST00000487596 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
RAD50-207ENST00000487596 G3V3G9 751 aa13.56□□□□□ -0.24
RAD50-207ENST00000487596 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
RAD50-207ENST00000487596 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
RAD50-207ENST00000487596 RGL2O15211 777 aa13.52□□□□□ -0.25
RAD50-207ENST00000487596 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
RAD50-207ENST00000487596 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
RAD50-207ENST00000487596 STK25O00506 426 aa13.49□□□□□ -0.25
RAD50-207ENST00000487596 SNPHO15079 494 aa13.49□□□□□ -0.25
RAD50-207ENST00000487596 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
RAD50-207ENST00000487596 NLRP6P59044 892 aa13.46□□□□□ -0.25
RAD50-207ENST00000487596 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
RAD50-207ENST00000487596 TMEM121BQ9BXQ6 578 aaPredicted RBP13.45□□□□□ -0.26
RAD50-207ENST00000487596 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
RAD50-207ENST00000487596 POTEMA6NI47 508 aa13.41□□□□□ -0.26
RAD50-207ENST00000487596 POTEGQ6S5H5 508 aa13.4□□□□□ -0.26
RAD50-207ENST00000487596 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
RAD50-207ENST00000487596 MS4A4AQ96JQ5 239 aa13.38□□□□□ -0.27
RAD50-207ENST00000487596 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
RAD50-207ENST00000487596 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
RAD50-207ENST00000487596 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
RAD50-207ENST00000487596 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
RAD50-207ENST00000487596 MFRPQ9BY79 579 aa13.34□□□□□ -0.27
RAD50-207ENST00000487596 ST18O60284 1047 aa13.32□□□□□ -0.28
RAD50-207ENST00000487596 DNAJC5Q9H3Z4 198 aa13.25□□□□□ -0.29
RAD50-207ENST00000487596 CHGAP10645 457 aaKnown RBP13.24□□□□□ -0.29
RAD50-207ENST00000487596 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
RAD50-207ENST00000487596 RYDENQ9NUL5 291 aaKnown RBP13.22□□□□□ -0.29
RAD50-207ENST00000487596 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
RAD50-207ENST00000487596 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
RAD50-207ENST00000487596 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
RAD50-207ENST00000487596 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms