RNA–Protein interactions for RNA: ENST00000486878.2

SCN2A-206, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-206ENST00000486878 CLCN6P51797 869 aa17.96■□□□□ 0.47
SCN2A-206ENST00000486878 SP7Q8TDD2 431 aaPredicted RBP17.95■□□□□ 0.46
SCN2A-206ENST00000486878 DCAF8Q5TAQ9 597 aa17.93■□□□□ 0.46
SCN2A-206ENST00000486878 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
SCN2A-206ENST00000486878 CIZ1Q9ULV3 898 aaPredicted RBP17.82■□□□□ 0.44
SCN2A-206ENST00000486878 PHF12Q96QT6 1004 aa17.81■□□□□ 0.44
SCN2A-206ENST00000486878 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
SCN2A-206ENST00000486878 KIF12Q96FN5 646 aa17.77■□□□□ 0.44
SCN2A-206ENST00000486878 GABBR2O75899 941 aa17.76■□□□□ 0.43
SCN2A-206ENST00000486878 CHRM1P11229 460 aaPredicted RBP17.76■□□□□ 0.43
SCN2A-206ENST00000486878 SGIP1Q9BQI5 828 aa17.74■□□□□ 0.43
SCN2A-206ENST00000486878 PYGBP11216 843 aa17.68■□□□□ 0.42
SCN2A-206ENST00000486878 MAP3K13O43283 966 aa17.67■□□□□ 0.42
SCN2A-206ENST00000486878 PCDHB13Q9Y5F0 798 aa17.63■□□□□ 0.41
SCN2A-206ENST00000486878 MS4A3Q96HJ5 214 aa17.62■□□□□ 0.41
SCN2A-206ENST00000486878 GALR2O43603 387 aaPredicted RBP17.61■□□□□ 0.41
SCN2A-206ENST00000486878 PKD2Q13563 968 aa17.59■□□□□ 0.41
SCN2A-206ENST00000486878 ZNF467Q7Z7K2 595 aaPredicted RBP17.57■□□□□ 0.4
SCN2A-206ENST00000486878 IFNL1Q8IU54 200 aa17.54■□□□□ 0.4
SCN2A-206ENST00000486878 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
SCN2A-206ENST00000486878 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
SCN2A-206ENST00000486878 DCBLD2Q96PD2 775 aa17.49■□□□□ 0.39
SCN2A-206ENST00000486878 TIE1P35590 1138 aa17.46■□□□□ 0.39
SCN2A-206ENST00000486878 PCDHB8Q9UN66 801 aa17.46■□□□□ 0.39
SCN2A-206ENST00000486878 RIOK3O14730 519 aaKnown RBP17.42■□□□□ 0.38
SCN2A-206ENST00000486878 ASTLQ6HA08 431 aaPredicted RBP17.39■□□□□ 0.37
SCN2A-206ENST00000486878 TAOK2Q9UL54 1235 aa17.39■□□□□ 0.37
SCN2A-206ENST00000486878 TRPC6Q9Y210 931 aa17.39■□□□□ 0.37
SCN2A-206ENST00000486878 PDAP1Q13442 181 aaKnown RBP17.38■□□□□ 0.37
SCN2A-206ENST00000486878 RNF25Q96BH1 459 aaPredicted RBP17.38■□□□□ 0.37
SCN2A-206ENST00000486878 BMP2KQ9NSY1 1161 aaPredicted RBP17.36■□□□□ 0.37
SCN2A-206ENST00000486878 POTEIP0CG38 1075 aa17.35■□□□□ 0.37
SCN2A-206ENST00000486878 ATMINO43313 823 aaPredicted RBP17.34■□□□□ 0.37
SCN2A-206ENST00000486878 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
SCN2A-206ENST00000486878 PSEN1P49768 467 aa17.33■□□□□ 0.36
SCN2A-206ENST00000486878 TTLL13PA6NNM8 815 aa17.32■□□□□ 0.36
SCN2A-206ENST00000486878 RGL2O15211 777 aa17.32■□□□□ 0.36
SCN2A-206ENST00000486878 TMEM106CQ9BVX2 250 aa17.32■□□□□ 0.36
SCN2A-206ENST00000486878 RTN4Q9NQC3 1192 aaKnown RBP17.3■□□□□ 0.36
SCN2A-206ENST00000486878 ATN1P54259 1190 aaPredicted RBP17.26■□□□□ 0.35
SCN2A-206ENST00000486878 TRIM35Q9UPQ4 493 aa17.2■□□□□ 0.34
SCN2A-206ENST00000486878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
SCN2A-206ENST00000486878 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
SCN2A-206ENST00000486878 SLC39A7Q92504 469 aa17.19■□□□□ 0.34
SCN2A-206ENST00000486878 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
SCN2A-206ENST00000486878 IER5LQ5T953 404 aa17.17■□□□□ 0.34
SCN2A-206ENST00000486878 C7P10643 843 aa17.16■□□□□ 0.34
SCN2A-206ENST00000486878 GOLGA2Q08379 1002 aa17.13■□□□□ 0.33
SCN2A-206ENST00000486878 STK25O00506 426 aa17.09■□□□□ 0.33
SCN2A-206ENST00000486878 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.32
SCN2A-206ENST00000486878 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
SCN2A-206ENST00000486878 METRNQ9UJH8 293 aa17.08■□□□□ 0.32
SCN2A-206ENST00000486878 MKRN3Q13064 507 aaKnown RBP17.07■□□□□ 0.32
SCN2A-206ENST00000486878 HS6ST3Q8IZP7 471 aa17.05■□□□□ 0.32
SCN2A-206ENST00000486878 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
SCN2A-206ENST00000486878 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
SCN2A-206ENST00000486878 SEC24BO95487 1268 aa16.99■□□□□ 0.31
SCN2A-206ENST00000486878 CHGAP10645 457 aaKnown RBP16.98■□□□□ 0.31
SCN2A-206ENST00000486878 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
SCN2A-206ENST00000486878 SOX12O15370 315 aa16.97■□□□□ 0.31
SCN2A-206ENST00000486878 EFCAB3Q8N7B9 438 aa16.97■□□□□ 0.31
SCN2A-206ENST00000486878 OCEL1Q9H607 264 aa16.96■□□□□ 0.31
SCN2A-206ENST00000486878 PLCG2P16885 1265 aa16.95■□□□□ 0.3
SCN2A-206ENST00000486878 DNAJC5Q9H3Z4 198 aa16.95■□□□□ 0.3
SCN2A-206ENST00000486878 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
SCN2A-206ENST00000486878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCN2A-206ENST00000486878 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
SCN2A-206ENST00000486878 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
SCN2A-206ENST00000486878 PDCD7Q8N8D1 485 aaKnown RBP16.86■□□□□ 0.29
SCN2A-206ENST00000486878 NLRP6P59044 892 aa16.84■□□□□ 0.29
SCN2A-206ENST00000486878 LHX8Q68G74 356 aa16.84■□□□□ 0.29
SCN2A-206ENST00000486878 PHF8Q9UPP1 1060 aa16.8■□□□□ 0.28
SCN2A-206ENST00000486878 MFRPQ9BY79 579 aa16.79■□□□□ 0.28
SCN2A-206ENST00000486878 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
SCN2A-206ENST00000486878 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
SCN2A-206ENST00000486878 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.28
SCN2A-206ENST00000486878 RYDENQ9NUL5 291 aaKnown RBP16.77■□□□□ 0.28
SCN2A-206ENST00000486878 MAMSTRQ6ZN01 415 aa16.75■□□□□ 0.27
SCN2A-206ENST00000486878 BBXQ8WY36 941 aaPredicted RBP16.73■□□□□ 0.27
SCN2A-206ENST00000486878 NKX1-1Q15270 411 aaPredicted RBP16.72■□□□□ 0.27
SCN2A-206ENST00000486878 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
SCN2A-206ENST00000486878 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
SCN2A-206ENST00000486878 DPY19L2Q6NUT2 758 aa16.68■□□□□ 0.26
SCN2A-206ENST00000486878 G3V3G9 751 aa16.66■□□□□ 0.26
SCN2A-206ENST00000486878 SCUBE2Q9NQ36 999 aa16.66■□□□□ 0.26
SCN2A-206ENST00000486878 BOLA1Q9Y3E2 137 aa16.65■□□□□ 0.26
SCN2A-206ENST00000486878 TMEM121BQ9BXQ6 578 aaPredicted RBP16.62■□□□□ 0.25
SCN2A-206ENST00000486878 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.62■□□□□ 0.25
SCN2A-206ENST00000486878 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
SCN2A-206ENST00000486878 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.24
SCN2A-206ENST00000486878 C3orf67Q6ZVT6 689 aa16.57■□□□□ 0.24
SCN2A-206ENST00000486878 MICALL2Q8IY33 904 aa16.56■□□□□ 0.24
SCN2A-206ENST00000486878 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
SCN2A-206ENST00000486878 PPP1R37O75864 691 aa16.51■□□□□ 0.23
SCN2A-206ENST00000486878 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
SCN2A-206ENST00000486878 SLAIN1Q8ND83 568 aa16.43■□□□□ 0.22
SCN2A-206ENST00000486878 PAXIP1Q6ZW49 1069 aaPredicted RBP16.39■□□□□ 0.21
SCN2A-206ENST00000486878 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
SCN2A-206ENST00000486878 TMEM92Q6UXU6 159 aa16.3■□□□□ 0.2
SCN2A-206ENST00000486878 SNPHO15079 494 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms