RNA–Protein interactions for RNA: ENST00000486458.1

STAMBP-209, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-209ENST00000486458 RASEFQ8IZ41 740 aa16.29■□□□□ 0.2
STAMBP-209ENST00000486458 NUBP1P53384 320 aa16.23■□□□□ 0.19
STAMBP-209ENST00000486458 MS4A3Q96HJ5 214 aa16.21■□□□□ 0.19
STAMBP-209ENST00000486458 KIF12Q96FN5 646 aa16.19■□□□□ 0.18
STAMBP-209ENST00000486458 LHX8Q68G74 356 aa16.16■□□□□ 0.18
STAMBP-209ENST00000486458 VASPP50552 380 aaPredicted RBP16.15■□□□□ 0.18
STAMBP-209ENST00000486458 MAP3K13O43283 966 aa16.08■□□□□ 0.16
STAMBP-209ENST00000486458 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
STAMBP-209ENST00000486458 FAM212AQ96EL1 285 aa16.07■□□□□ 0.16
STAMBP-209ENST00000486458 PELP1Q8IZL8 1130 aaKnown RBP16.05■□□□□ 0.16
STAMBP-209ENST00000486458 ATMINO43313 823 aaPredicted RBP16.04■□□□□ 0.16
STAMBP-209ENST00000486458 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
STAMBP-209ENST00000486458 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
STAMBP-209ENST00000486458 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
STAMBP-209ENST00000486458 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
STAMBP-209ENST00000486458 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
STAMBP-209ENST00000486458 TIE1P35590 1138 aa15.94■□□□□ 0.14
STAMBP-209ENST00000486458 BMP2KQ9NSY1 1161 aaPredicted RBP15.94■□□□□ 0.14
STAMBP-209ENST00000486458 ATN1P54259 1190 aaPredicted RBP15.93■□□□□ 0.14
STAMBP-209ENST00000486458 SLC39A7Q92504 469 aa15.91■□□□□ 0.14
STAMBP-209ENST00000486458 C7P10643 843 aa15.9■□□□□ 0.14
STAMBP-209ENST00000486458 IFNLR1Q8IU57 520 aaPredicted RBP15.9■□□□□ 0.14
STAMBP-209ENST00000486458 IFNL1Q8IU54 200 aa15.88■□□□□ 0.13
STAMBP-209ENST00000486458 METRNQ9UJH8 293 aa15.88■□□□□ 0.13
STAMBP-209ENST00000486458 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
STAMBP-209ENST00000486458 TTLL13PA6NNM8 815 aa15.85■□□□□ 0.13
STAMBP-209ENST00000486458 PYGBP11216 843 aa15.84■□□□□ 0.13
STAMBP-209ENST00000486458 GSE1Q14687 1217 aa15.84■□□□□ 0.13
STAMBP-209ENST00000486458 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
STAMBP-209ENST00000486458 OTUD5Q96G74 571 aa15.76■□□□□ 0.11
STAMBP-209ENST00000486458 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
STAMBP-209ENST00000486458 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
STAMBP-209ENST00000486458 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
STAMBP-209ENST00000486458 TMEM106CQ9BVX2 250 aa15.72■□□□□ 0.11
STAMBP-209ENST00000486458 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
STAMBP-209ENST00000486458 PCDHB8Q9UN66 801 aa15.7■□□□□ 0.1
STAMBP-209ENST00000486458 IER5LQ5T953 404 aa15.69■□□□□ 0.1
STAMBP-209ENST00000486458 ZNF467Q7Z7K2 595 aaPredicted RBP15.65■□□□□ 0.1
STAMBP-209ENST00000486458 COLQQ9Y215 455 aaPredicted RBP15.64■□□□□ 0.09
STAMBP-209ENST00000486458 CIZ1Q9ULV3 898 aaPredicted RBP15.63■□□□□ 0.09
STAMBP-209ENST00000486458 SEC24BO95487 1268 aa15.6■□□□□ 0.09
STAMBP-209ENST00000486458 MAMSTRQ6ZN01 415 aa15.6■□□□□ 0.09
STAMBP-209ENST00000486458 IRX5P78411 483 aaPredicted RBP15.53■□□□□ 0.08
STAMBP-209ENST00000486458 SCUBE2Q9NQ36 999 aa15.51■□□□□ 0.07
STAMBP-209ENST00000486458 PSEN1P49768 467 aa15.5■□□□□ 0.07
STAMBP-209ENST00000486458 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
STAMBP-209ENST00000486458 PLCG2P16885 1265 aa15.47■□□□□ 0.07
STAMBP-209ENST00000486458 PDAP1Q13442 181 aaKnown RBP15.46■□□□□ 0.07
STAMBP-209ENST00000486458 OCEL1Q9H607 264 aa15.46■□□□□ 0.07
STAMBP-209ENST00000486458 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
STAMBP-209ENST00000486458 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
STAMBP-209ENST00000486458 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
STAMBP-209ENST00000486458 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
STAMBP-209ENST00000486458 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
STAMBP-209ENST00000486458 CABP2Q9NPB3 220 aa15.28■□□□□ 0.04
STAMBP-209ENST00000486458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.28■□□□□ 0.04
STAMBP-209ENST00000486458 RIOK3O14730 519 aaKnown RBP15.26■□□□□ 0.03
STAMBP-209ENST00000486458 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
STAMBP-209ENST00000486458 LCE2DQ5TA82 110 aaPredicted RBP15.22■□□□□ 0.03
STAMBP-209ENST00000486458 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.03
STAMBP-209ENST00000486458 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
STAMBP-209ENST00000486458 POTEMA6NI47 508 aa15.18■□□□□ 0.02
STAMBP-209ENST00000486458 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
STAMBP-209ENST00000486458 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.17■□□□□ 0.02
STAMBP-209ENST00000486458 POTEGQ6S5H5 508 aa15.16■□□□□ 0.02
STAMBP-209ENST00000486458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
STAMBP-209ENST00000486458 EFCAB3Q8N7B9 438 aa15.15■□□□□ 0.02
STAMBP-209ENST00000486458 ZFP91Q96JP5 570 aaPredicted RBP15.15■□□□□ 0.02
STAMBP-209ENST00000486458 DPY19L2Q6NUT2 758 aa15.14■□□□□ 0.01
STAMBP-209ENST00000486458 PKD2Q13563 968 aa15.11■□□□□ 0.01
STAMBP-209ENST00000486458 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
STAMBP-209ENST00000486458 C3orf67Q6ZVT6 689 aa15.09■□□□□ 0.01
STAMBP-209ENST00000486458 TAOK2Q9UL54 1235 aa15.07■□□□□ 0
STAMBP-209ENST00000486458 SOX12O15370 315 aa15.05■□□□□ -0
STAMBP-209ENST00000486458 BOLA1Q9Y3E2 137 aa15.05■□□□□ -0
STAMBP-209ENST00000486458 ST18O60284 1047 aa15.01□□□□□ -0.01
STAMBP-209ENST00000486458 SNPHO15079 494 aa15□□□□□ -0.01
STAMBP-209ENST00000486458 TMEM121BQ9BXQ6 578 aaPredicted RBP15□□□□□ -0.01
STAMBP-209ENST00000486458 BCL11BQ9C0K0 894 aaPredicted RBP15□□□□□ -0.01
STAMBP-209ENST00000486458 G3V3G9 751 aa14.99□□□□□ -0.01
STAMBP-209ENST00000486458 RGL2O15211 777 aa14.99□□□□□ -0.01
STAMBP-209ENST00000486458 PCDH10Q9P2E7 1040 aa14.98□□□□□ -0.01
STAMBP-209ENST00000486458 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
STAMBP-209ENST00000486458 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
STAMBP-209ENST00000486458 STK24Q9Y6E0 443 aa14.94□□□□□ -0.02
STAMBP-209ENST00000486458 STK25O00506 426 aa14.92□□□□□ -0.02
STAMBP-209ENST00000486458 NLRP6P59044 892 aa14.89□□□□□ -0.03
STAMBP-209ENST00000486458 MICALL2Q8IY33 904 aa14.89□□□□□ -0.03
STAMBP-209ENST00000486458 FBXO22Q8NEZ5 403 aa14.89□□□□□ -0.03
STAMBP-209ENST00000486458 MFRPQ9BY79 579 aa14.85□□□□□ -0.03
STAMBP-209ENST00000486458 PLSCR2Q9NRY7 297 aa14.82□□□□□ -0.04
STAMBP-209ENST00000486458 TMEM92Q6UXU6 159 aa14.79□□□□□ -0.04
STAMBP-209ENST00000486458 HOXB3P14651 431 aaPredicted RBP14.78□□□□□ -0.04
STAMBP-209ENST00000486458 CDAN1Q8IWY9 1227 aa14.78□□□□□ -0.04
STAMBP-209ENST00000486458 MARVELD3Q96A59 401 aa14.76□□□□□ -0.05
STAMBP-209ENST00000486458 HS6ST3Q8IZP7 471 aa14.7□□□□□ -0.06
STAMBP-209ENST00000486458 DOK7Q18PE1 504 aa14.69□□□□□ -0.06
STAMBP-209ENST00000486458 EMP3P54852 163 aa14.68□□□□□ -0.06
STAMBP-209ENST00000486458 HOXB1P14653 301 aaPredicted RBP14.64□□□□□ -0.07
STAMBP-209ENST00000486458 ZNF710Q8N1W2 664 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms