RNA–Protein interactions for RNA: ENST00000486428.6

CCNC-206, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-206ENST00000486428 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
CCNC-206ENST00000486428 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
CCNC-206ENST00000486428 MS4A3Q96HJ5 214 aa13.82□□□□□ -0.2
CCNC-206ENST00000486428 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
CCNC-206ENST00000486428 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
CCNC-206ENST00000486428 FAM212AQ96EL1 285 aa13.74□□□□□ -0.21
CCNC-206ENST00000486428 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
CCNC-206ENST00000486428 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
CCNC-206ENST00000486428 C7P10643 843 aa13.7□□□□□ -0.22
CCNC-206ENST00000486428 ATMINO43313 823 aaPredicted RBP13.69□□□□□ -0.22
CCNC-206ENST00000486428 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
CCNC-206ENST00000486428 MAP3K13O43283 966 aa13.66□□□□□ -0.22
CCNC-206ENST00000486428 METRNQ9UJH8 293 aa13.66□□□□□ -0.22
CCNC-206ENST00000486428 TIE1P35590 1138 aa13.65□□□□□ -0.22
CCNC-206ENST00000486428 NUBP1P53384 320 aa13.65□□□□□ -0.22
CCNC-206ENST00000486428 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
CCNC-206ENST00000486428 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
CCNC-206ENST00000486428 MAMSTRQ6ZN01 415 aa13.58□□□□□ -0.24
CCNC-206ENST00000486428 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
CCNC-206ENST00000486428 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
CCNC-206ENST00000486428 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
CCNC-206ENST00000486428 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
CCNC-206ENST00000486428 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
CCNC-206ENST00000486428 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
CCNC-206ENST00000486428 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
CCNC-206ENST00000486428 SCUBE2Q9NQ36 999 aa13.5□□□□□ -0.25
CCNC-206ENST00000486428 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
CCNC-206ENST00000486428 SEC24BO95487 1268 aa13.49□□□□□ -0.25
CCNC-206ENST00000486428 GSE1Q14687 1217 aa13.49□□□□□ -0.25
CCNC-206ENST00000486428 TRPC6Q9Y210 931 aa13.48□□□□□ -0.25
CCNC-206ENST00000486428 IER5LQ5T953 404 aa13.47□□□□□ -0.25
CCNC-206ENST00000486428 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
CCNC-206ENST00000486428 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
CCNC-206ENST00000486428 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
CCNC-206ENST00000486428 PYGBP11216 843 aa13.41□□□□□ -0.26
CCNC-206ENST00000486428 ZNF467Q7Z7K2 595 aaPredicted RBP13.36□□□□□ -0.27
CCNC-206ENST00000486428 PLCG2P16885 1265 aa13.33□□□□□ -0.28
CCNC-206ENST00000486428 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
CCNC-206ENST00000486428 ABCC9O60706 1549 aa13.31□□□□□ -0.28
CCNC-206ENST00000486428 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
CCNC-206ENST00000486428 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
CCNC-206ENST00000486428 CHRM1P11229 460 aaPredicted RBP13.28□□□□□ -0.28
CCNC-206ENST00000486428 GOLGA2Q08379 1002 aa13.28□□□□□ -0.28
CCNC-206ENST00000486428 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
CCNC-206ENST00000486428 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
CCNC-206ENST00000486428 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
CCNC-206ENST00000486428 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
CCNC-206ENST00000486428 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
CCNC-206ENST00000486428 POTEMA6NI47 508 aa13.2□□□□□ -0.3
CCNC-206ENST00000486428 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
CCNC-206ENST00000486428 MKRN3Q13064 507 aaKnown RBP13.2□□□□□ -0.3
CCNC-206ENST00000486428 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
CCNC-206ENST00000486428 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
CCNC-206ENST00000486428 PSEN1P49768 467 aa13.14□□□□□ -0.31
CCNC-206ENST00000486428 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
CCNC-206ENST00000486428 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
CCNC-206ENST00000486428 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
CCNC-206ENST00000486428 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
CCNC-206ENST00000486428 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
CCNC-206ENST00000486428 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
CCNC-206ENST00000486428 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
CCNC-206ENST00000486428 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
CCNC-206ENST00000486428 SNPHO15079 494 aa13.04□□□□□ -0.32
CCNC-206ENST00000486428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■□□□□ 10.7
CCNC-206ENST00000486428 G3V3G9 751 aa13.02□□□□□ -0.33
CCNC-206ENST00000486428 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
CCNC-206ENST00000486428 CABP2Q9NPB3 220 aa12.98□□□□□ -0.33
CCNC-206ENST00000486428 LCE2DQ5TA82 110 aaPredicted RBP12.95□□□□□ -0.34
CCNC-206ENST00000486428 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
CCNC-206ENST00000486428 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
CCNC-206ENST00000486428 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
CCNC-206ENST00000486428 ST18O60284 1047 aa12.88□□□□□ -0.35
CCNC-206ENST00000486428 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
CCNC-206ENST00000486428 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
CCNC-206ENST00000486428 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
CCNC-206ENST00000486428 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
CCNC-206ENST00000486428 EFCAB3Q8N7B9 438 aa12.79□□□□□ -0.36
CCNC-206ENST00000486428 SOX12O15370 315 aa12.78□□□□□ -0.36
CCNC-206ENST00000486428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
CCNC-206ENST00000486428 DPY19L2Q6NUT2 758 aa12.75□□□□□ -0.37
CCNC-206ENST00000486428 ZFP91Q96JP5 570 aaPredicted RBP12.75□□□□□ -0.37
CCNC-206ENST00000486428 RNF25Q96BH1 459 aaPredicted RBP12.72□□□□□ -0.37
CCNC-206ENST00000486428 CCDC180Q9P1Z9 1646 aa12.72□□□□□ -0.37
CCNC-206ENST00000486428 EMP3P54852 163 aa12.69□□□□□ -0.38
CCNC-206ENST00000486428 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
CCNC-206ENST00000486428 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
CCNC-206ENST00000486428 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
CCNC-206ENST00000486428 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
CCNC-206ENST00000486428 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
CCNC-206ENST00000486428 NLRP6P59044 892 aa12.65□□□□□ -0.38
CCNC-206ENST00000486428 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
CCNC-206ENST00000486428 MICALL2Q8IY33 904 aa12.63□□□□□ -0.39
CCNC-206ENST00000486428 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
CCNC-206ENST00000486428 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
CCNC-206ENST00000486428 STK25O00506 426 aa12.6□□□□□ -0.39
CCNC-206ENST00000486428 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
CCNC-206ENST00000486428 HS3ST6Q96QI5 342 aa12.55□□□□□ -0.4
CCNC-206ENST00000486428 HOXB3P14651 431 aaPredicted RBP12.54□□□□□ -0.4
CCNC-206ENST00000486428 HOXB1P14653 301 aaPredicted RBP12.54□□□□□ -0.4
CCNC-206ENST00000486428 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms