RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
SMARCC1-207ENST00000485833 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
SMARCC1-207ENST00000485833 CLCN6P51797 869 aa14.03□□□□□ -0.16
SMARCC1-207ENST00000485833 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
SMARCC1-207ENST00000485833 GABBR2O75899 941 aa14.02□□□□□ -0.17
SMARCC1-207ENST00000485833 GSE1Q14687 1217 aa14.01□□□□□ -0.17
SMARCC1-207ENST00000485833 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
SMARCC1-207ENST00000485833 CIZ1Q9ULV3 898 aaPredicted RBP13.94□□□□□ -0.18
SMARCC1-207ENST00000485833 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
SMARCC1-207ENST00000485833 MAP3K13O43283 966 aa13.89□□□□□ -0.19
SMARCC1-207ENST00000485833 PYGBP11216 843 aa13.89□□□□□ -0.19
SMARCC1-207ENST00000485833 MS4A3Q96HJ5 214 aa13.89□□□□□ -0.19
SMARCC1-207ENST00000485833 SGIP1Q9BQI5 828 aa13.86□□□□□ -0.19
SMARCC1-207ENST00000485833 PCDHB13Q9Y5F0 798 aa13.84□□□□□ -0.19
SMARCC1-207ENST00000485833 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
SMARCC1-207ENST00000485833 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
SMARCC1-207ENST00000485833 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
SMARCC1-207ENST00000485833 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
SMARCC1-207ENST00000485833 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
SMARCC1-207ENST00000485833 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
SMARCC1-207ENST00000485833 PKD2Q13563 968 aa13.72□□□□□ -0.21
SMARCC1-207ENST00000485833 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
SMARCC1-207ENST00000485833 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
SMARCC1-207ENST00000485833 TIE1P35590 1138 aa13.69□□□□□ -0.22
SMARCC1-207ENST00000485833 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
SMARCC1-207ENST00000485833 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
SMARCC1-207ENST00000485833 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
SMARCC1-207ENST00000485833 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
SMARCC1-207ENST00000485833 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
SMARCC1-207ENST00000485833 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
SMARCC1-207ENST00000485833 TMEM106CQ9BVX2 250 aa13.61□□□□□ -0.23
SMARCC1-207ENST00000485833 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
SMARCC1-207ENST00000485833 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
SMARCC1-207ENST00000485833 PDAP1Q13442 181 aaKnown RBP13.58□□□□□ -0.24
SMARCC1-207ENST00000485833 PSEN1P49768 467 aa13.57□□□□□ -0.24
SMARCC1-207ENST00000485833 PELP1Q8IZL8 1130 aaKnown RBP13.57□□□□□ -0.24
SMARCC1-207ENST00000485833 RGL2O15211 777 aa13.54□□□□□ -0.24
SMARCC1-207ENST00000485833 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
SMARCC1-207ENST00000485833 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
SMARCC1-207ENST00000485833 SLC39A7Q92504 469 aa13.51□□□□□ -0.25
SMARCC1-207ENST00000485833 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
SMARCC1-207ENST00000485833 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
SMARCC1-207ENST00000485833 C7P10643 843 aa13.47□□□□□ -0.25
SMARCC1-207ENST00000485833 METRNQ9UJH8 293 aa13.47□□□□□ -0.25
SMARCC1-207ENST00000485833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.46□□□□□ -0.25
SMARCC1-207ENST00000485833 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
SMARCC1-207ENST00000485833 IER5LQ5T953 404 aa13.45□□□□□ -0.26
SMARCC1-207ENST00000485833 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
SMARCC1-207ENST00000485833 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
SMARCC1-207ENST00000485833 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
SMARCC1-207ENST00000485833 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
SMARCC1-207ENST00000485833 SEC24BO95487 1268 aa13.36□□□□□ -0.27
SMARCC1-207ENST00000485833 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
SMARCC1-207ENST00000485833 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
SMARCC1-207ENST00000485833 STK25O00506 426 aa13.35□□□□□ -0.27
SMARCC1-207ENST00000485833 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
SMARCC1-207ENST00000485833 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
SMARCC1-207ENST00000485833 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
SMARCC1-207ENST00000485833 LHX8Q68G74 356 aa13.32□□□□□ -0.28
SMARCC1-207ENST00000485833 PLCG2P16885 1265 aa13.31□□□□□ -0.28
SMARCC1-207ENST00000485833 EFCAB3Q8N7B9 438 aa13.31□□□□□ -0.28
SMARCC1-207ENST00000485833 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
SMARCC1-207ENST00000485833 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
SMARCC1-207ENST00000485833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.28□□□□□ -0.282e-9■■□□□ 12.4
SMARCC1-207ENST00000485833 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
SMARCC1-207ENST00000485833 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
SMARCC1-207ENST00000485833 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
SMARCC1-207ENST00000485833 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
SMARCC1-207ENST00000485833 SOX12O15370 315 aa13.24□□□□□ -0.29
SMARCC1-207ENST00000485833 PDCD7Q8N8D1 485 aaKnown RBP13.24□□□□□ -0.29
SMARCC1-207ENST00000485833 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
SMARCC1-207ENST00000485833 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
SMARCC1-207ENST00000485833 NLRP6P59044 892 aa13.15□□□□□ -0.3
SMARCC1-207ENST00000485833 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
SMARCC1-207ENST00000485833 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
SMARCC1-207ENST00000485833 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
SMARCC1-207ENST00000485833 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
SMARCC1-207ENST00000485833 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
SMARCC1-207ENST00000485833 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
SMARCC1-207ENST00000485833 MS4A4AQ96JQ5 239 aa13.12□□□□□ -0.31
SMARCC1-207ENST00000485833 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
SMARCC1-207ENST00000485833 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
SMARCC1-207ENST00000485833 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
SMARCC1-207ENST00000485833 BOLA1Q9Y3E2 137 aa13.06□□□□□ -0.32
SMARCC1-207ENST00000485833 G3V3G9 751 aa13.05□□□□□ -0.32
SMARCC1-207ENST00000485833 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.33
SMARCC1-207ENST00000485833 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
SMARCC1-207ENST00000485833 EIF2AK3Q9NZJ5 1116 aaKnown RBP13□□□□□ -0.33
SMARCC1-207ENST00000485833 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
SMARCC1-207ENST00000485833 RYDENQ9NUL5 291 aaKnown RBP12.99□□□□□ -0.33
SMARCC1-207ENST00000485833 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.33
SMARCC1-207ENST00000485833 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
SMARCC1-207ENST00000485833 PPP1R37O75864 691 aa12.94□□□□□ -0.34
SMARCC1-207ENST00000485833 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
SMARCC1-207ENST00000485833 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
SMARCC1-207ENST00000485833 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
SMARCC1-207ENST00000485833 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
SMARCC1-207ENST00000485833 SNPHO15079 494 aa12.75□□□□□ -0.37
SMARCC1-207ENST00000485833 PAXIP1Q6ZW49 1069 aaPredicted RBP12.75□□□□□ -0.37
SMARCC1-207ENST00000485833 KIF3CO14782 793 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms