RNA–Protein interactions for RNA: ENST00000485709.1

C1D-207, Transcript of C1D nuclear receptor corepressor, humanhuman

TSL 3

Gene C1D, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-207ENST00000485709 MS4A3Q96HJ5 214 aa13.77□□□□□ -0.21
C1D-207ENST00000485709 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
C1D-207ENST00000485709 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
C1D-207ENST00000485709 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
C1D-207ENST00000485709 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
C1D-207ENST00000485709 NUBP1P53384 320 aa13.66□□□□□ -0.22
C1D-207ENST00000485709 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
C1D-207ENST00000485709 ASTLQ6HA08 431 aaPredicted RBP13.65□□□□□ -0.22
C1D-207ENST00000485709 ATMINO43313 823 aaPredicted RBP13.64□□□□□ -0.23
C1D-207ENST00000485709 MAP3K13O43283 966 aa13.63□□□□□ -0.23
C1D-207ENST00000485709 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
C1D-207ENST00000485709 TRPC6Q9Y210 931 aa13.58□□□□□ -0.24
C1D-207ENST00000485709 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
C1D-207ENST00000485709 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
C1D-207ENST00000485709 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
C1D-207ENST00000485709 BMP2KQ9NSY1 1161 aaPredicted RBP13.53□□□□□ -0.24
C1D-207ENST00000485709 C7P10643 843 aa13.51□□□□□ -0.25
C1D-207ENST00000485709 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
C1D-207ENST00000485709 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
C1D-207ENST00000485709 TIE1P35590 1138 aa13.48□□□□□ -0.25
C1D-207ENST00000485709 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
C1D-207ENST00000485709 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
C1D-207ENST00000485709 PCDHB13Q9Y5F0 798 aa13.48□□□□□ -0.25
C1D-207ENST00000485709 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
C1D-207ENST00000485709 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
C1D-207ENST00000485709 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
C1D-207ENST00000485709 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
C1D-207ENST00000485709 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
C1D-207ENST00000485709 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
C1D-207ENST00000485709 PYGBP11216 843 aa13.37□□□□□ -0.27
C1D-207ENST00000485709 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
C1D-207ENST00000485709 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
C1D-207ENST00000485709 POTEMA6NI47 508 aa13.31□□□□□ -0.28
C1D-207ENST00000485709 TMEM106CQ9BVX2 250 aa13.31□□□□□ -0.28
C1D-207ENST00000485709 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
C1D-207ENST00000485709 SEC24BO95487 1268 aa13.27□□□□□ -0.29
C1D-207ENST00000485709 GSE1Q14687 1217 aa13.27□□□□□ -0.29
C1D-207ENST00000485709 IER5LQ5T953 404 aa13.27□□□□□ -0.29
C1D-207ENST00000485709 IFNLR1Q8IU57 520 aaPredicted RBP13.27□□□□□ -0.29
C1D-207ENST00000485709 PCDHB8Q9UN66 801 aa13.27□□□□□ -0.29
C1D-207ENST00000485709 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
C1D-207ENST00000485709 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
C1D-207ENST00000485709 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
C1D-207ENST00000485709 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
C1D-207ENST00000485709 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
C1D-207ENST00000485709 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
C1D-207ENST00000485709 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
C1D-207ENST00000485709 PLCG2P16885 1265 aa13.12□□□□□ -0.31
C1D-207ENST00000485709 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
C1D-207ENST00000485709 OCEL1Q9H607 264 aa13.08□□□□□ -0.32
C1D-207ENST00000485709 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
C1D-207ENST00000485709 PSEN1P49768 467 aa13.05□□□□□ -0.32
C1D-207ENST00000485709 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
C1D-207ENST00000485709 TRIM41Q8WV44 630 aa13□□□□□ -0.33
C1D-207ENST00000485709 PDAP1Q13442 181 aaKnown RBP12.99□□□□□ -0.33
C1D-207ENST00000485709 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
C1D-207ENST00000485709 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
C1D-207ENST00000485709 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
C1D-207ENST00000485709 MKRN3Q13064 507 aaKnown RBP12.97□□□□□ -0.33
C1D-207ENST00000485709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.34
C1D-207ENST00000485709 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
C1D-207ENST00000485709 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
C1D-207ENST00000485709 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
C1D-207ENST00000485709 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
C1D-207ENST00000485709 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
C1D-207ENST00000485709 ST18O60284 1047 aa12.83□□□□□ -0.36
C1D-207ENST00000485709 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
C1D-207ENST00000485709 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
C1D-207ENST00000485709 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
C1D-207ENST00000485709 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
C1D-207ENST00000485709 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
C1D-207ENST00000485709 SNPHO15079 494 aa12.73□□□□□ -0.37
C1D-207ENST00000485709 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
C1D-207ENST00000485709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
C1D-207ENST00000485709 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
C1D-207ENST00000485709 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
C1D-207ENST00000485709 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
C1D-207ENST00000485709 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
C1D-207ENST00000485709 G3V3G9 751 aa12.66□□□□□ -0.38
C1D-207ENST00000485709 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
C1D-207ENST00000485709 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
C1D-207ENST00000485709 SOX12O15370 315 aa12.62□□□□□ -0.39
C1D-207ENST00000485709 MS4A4AQ96JQ5 239 aa12.6□□□□□ -0.39
C1D-207ENST00000485709 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
C1D-207ENST00000485709 PKD2Q13563 968 aa12.57□□□□□ -0.4
C1D-207ENST00000485709 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
C1D-207ENST00000485709 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
C1D-207ENST00000485709 HOXB3P14651 431 aaPredicted RBP12.54□□□□□ -0.4
C1D-207ENST00000485709 EMP3P54852 163 aa12.52□□□□□ -0.41
C1D-207ENST00000485709 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
C1D-207ENST00000485709 STK24Q9Y6E0 443 aa12.52□□□□□ -0.41
C1D-207ENST00000485709 RGL2O15211 777 aa12.5□□□□□ -0.41
C1D-207ENST00000485709 STK25O00506 426 aa12.49□□□□□ -0.41
C1D-207ENST00000485709 FBXO22Q8NEZ5 403 aa12.49□□□□□ -0.41
C1D-207ENST00000485709 POTEB3A0JP26 581 aa12.48□□□□□ -0.41
C1D-207ENST00000485709 NLRP6P59044 892 aa12.48□□□□□ -0.41
C1D-207ENST00000485709 POTEBQ6S5H4 581 aa12.48□□□□□ -0.41
C1D-207ENST00000485709 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
C1D-207ENST00000485709 FAM205CA6NFA0 338 aa12.45□□□□□ -0.42
C1D-207ENST00000485709 DOK7Q18PE1 504 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms