RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
FN1-222ENST00000485567 HS6ST3Q8IZP7 471 aa9.47□□□□□ -0.89
FN1-222ENST00000485567 TAOK2Q9UL54 1235 aa9.47□□□□□ -0.89
FN1-222ENST00000485567 DNAJC5Q9H3Z4 198 aa9.46□□□□□ -0.9
FN1-222ENST00000485567 CHRM1P11229 460 aaPredicted RBP9.45□□□□□ -0.9
FN1-222ENST00000485567 FAM212AQ96EL1 285 aa9.45□□□□□ -0.9
FN1-222ENST00000485567 RNF25Q96BH1 459 aaPredicted RBP9.44□□□□□ -0.9
FN1-222ENST00000485567 BCANQ96GW7 911 aa9.44□□□□□ -0.9
FN1-222ENST00000485567 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
FN1-222ENST00000485567 RIOK3O14730 519 aaKnown RBP9.42□□□□□ -0.9
FN1-222ENST00000485567 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
FN1-222ENST00000485567 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
FN1-222ENST00000485567 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
FN1-222ENST00000485567 VGFO15240 615 aaPredicted RBP9.37□□□□□ -0.91
FN1-222ENST00000485567 SGIP1Q9BQI5 828 aa9.37□□□□□ -0.91
FN1-222ENST00000485567 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
FN1-222ENST00000485567 STK25O00506 426 aa9.29□□□□□ -0.92
FN1-222ENST00000485567 GTPBP6O43824 516 aaPredicted RBP9.28□□□□□ -0.92
FN1-222ENST00000485567 PYGBP11216 843 aa9.27□□□□□ -0.93
FN1-222ENST00000485567 FARP1Q9Y4F1 1045 aaPredicted RBP9.26□□□□□ -0.93
FN1-222ENST00000485567 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
FN1-222ENST00000485567 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
FN1-222ENST00000485567 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
FN1-222ENST00000485567 CHADLQ6NUI6 762 aa9.24□□□□□ -0.93
FN1-222ENST00000485567 BCL11BQ9C0K0 894 aaPredicted RBP9.24□□□□□ -0.93
FN1-222ENST00000485567 STK24Q9Y6E0 443 aa9.23□□□□□ -0.93
FN1-222ENST00000485567 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
FN1-222ENST00000485567 TSPYL2Q9H2G4 693 aaPredicted RBP9.2□□□□□ -0.94
FN1-222ENST00000485567 FXR2P51116 673 aaKnown RBP eCLIP9.19□□□□□ -0.94
FN1-222ENST00000485567 PRKAR2AP13861 404 aaKnown RBP9.18□□□□□ -0.94
FN1-222ENST00000485567 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
FN1-222ENST00000485567 CCDC61Q9Y6R9 512 aa9.15□□□□□ -0.94
FN1-222ENST00000485567 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
FN1-222ENST00000485567 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
FN1-222ENST00000485567 NBR1Q14596 966 aa9.11□□□□□ -0.95
FN1-222ENST00000485567 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
FN1-222ENST00000485567 PCDHB8Q9UN66 801 aa9.1□□□□□ -0.95
FN1-222ENST00000485567 PCDHB13Q9Y5F0 798 aa9.1□□□□□ -0.95
FN1-222ENST00000485567 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
FN1-222ENST00000485567 PSEN1P49768 467 aa9.08□□□□□ -0.96
FN1-222ENST00000485567 CHRDL2Q6WN34 429 aa9.08□□□□□ -0.96
FN1-222ENST00000485567 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
FN1-222ENST00000485567 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
FN1-222ENST00000485567 IFNL1Q8IU54 200 aa9.03□□□□□ -0.96
FN1-222ENST00000485567 MAP3K13O43283 966 aa9.02□□□□□ -0.97
FN1-222ENST00000485567 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
FN1-222ENST00000485567 SOX12O15370 315 aa9□□□□□ -0.97
FN1-222ENST00000485567 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
FN1-222ENST00000485567 NLRP6P59044 892 aa8.97□□□□□ -0.97
FN1-222ENST00000485567 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
FN1-222ENST00000485567 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
FN1-222ENST00000485567 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
FN1-222ENST00000485567 ZRANB1Q9UGI0 708 aa8.96□□□□□ -0.98
FN1-222ENST00000485567 FBXO22Q8NEZ5 403 aa8.95□□□□□ -0.98
FN1-222ENST00000485567 CABP2Q9NPB3 220 aa8.95□□□□□ -0.98
FN1-222ENST00000485567 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
FN1-222ENST00000485567 PPP1R37O75864 691 aa8.91□□□□□ -0.98
FN1-222ENST00000485567 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
FN1-222ENST00000485567 PHF12Q96QT6 1004 aa8.89□□□□□ -0.99
FN1-222ENST00000485567 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
FN1-222ENST00000485567 C19orf67A6NJJ6 358 aa8.86□□□□□ -0.99
FN1-222ENST00000485567 ARHGEF1Q92888 912 aaKnown RBP8.84□□□□□ -0.99
FN1-222ENST00000485567 TMEM106CQ9BVX2 250 aa8.84□□□□□ -0.99
FN1-222ENST00000485567 GOLGA2Q08379 1002 aa8.83□□□□□ -1
FN1-222ENST00000485567 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
FN1-222ENST00000485567 PDE4AP27815 886 aa8.82□□□□□ -1
FN1-222ENST00000485567 E2F4Q16254 413 aa8.82□□□□□ -1
FN1-222ENST00000485567 MS4A3Q96HJ5 214 aa8.81□□□□□ -1
FN1-222ENST00000485567 TIE1P35590 1138 aa8.8□□□□□ -1
FN1-222ENST00000485567 MKRN3Q13064 507 aaKnown RBP8.8□□□□□ -1
FN1-222ENST00000485567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -15e-7■■■□□ 19.2
FN1-222ENST00000485567 NCKAP5LQ9HCH0 1330 aa8.79□□□□□ -1
FN1-222ENST00000485567 MFSD10Q14728 455 aa8.78□□□□□ -1
FN1-222ENST00000485567 TRPC6Q9Y210 931 aa8.78□□□□□ -1
FN1-222ENST00000485567 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
FN1-222ENST00000485567 CRISPLD2Q9H0B8 497 aa8.77□□□□□ -1.01
FN1-222ENST00000485567 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
FN1-222ENST00000485567 CLCN6P51797 869 aa8.76□□□□□ -1.01
FN1-222ENST00000485567 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
FN1-222ENST00000485567 LARP6Q9BRS8 491 aaKnown RBP8.76□□□□□ -1.01
FN1-222ENST00000485567 ARIH1Q9Y4X5 557 aaPredicted RBP8.75□□□□□ -1.01
FN1-222ENST00000485567 TTLL13PA6NNM8 815 aa8.74□□□□□ -1.01
FN1-222ENST00000485567 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
FN1-222ENST00000485567 BMP2KQ9NSY1 1161 aaPredicted RBP8.72□□□□□ -1.01
FN1-222ENST00000485567 TESPA1A2RU30 521 aaPredicted RBP8.71□□□□□ -1.02
FN1-222ENST00000485567 CAMK2BQ13554 666 aa8.71□□□□□ -1.02
FN1-222ENST00000485567 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.02
FN1-222ENST00000485567 SEMA3EO15041 775 aa8.68□□□□□ -1.02
FN1-222ENST00000485567 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
FN1-222ENST00000485567 GPHNQ9NQX3 736 aaPredicted RBP8.67□□□□□ -1.02
FN1-222ENST00000485567 TRIM35Q9UPQ4 493 aa8.67□□□□□ -1.02
FN1-222ENST00000485567 GALR2O43603 387 aaPredicted RBP8.66□□□□□ -1.02
FN1-222ENST00000485567 HAX1O00165 279 aa8.63□□□□□ -1.03
FN1-222ENST00000485567 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
FN1-222ENST00000485567 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
FN1-222ENST00000485567 IER5LQ5T953 404 aa8.61□□□□□ -1.03
FN1-222ENST00000485567 DPY19L2Q6NUT2 758 aa8.61□□□□□ -1.03
FN1-222ENST00000485567 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
FN1-222ENST00000485567 MICALL2Q8IY33 904 aa8.6□□□□□ -1.03
FN1-222ENST00000485567 PDCD7Q8N8D1 485 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms