RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
MDH1-212ENST00000485155 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
MDH1-212ENST00000485155 ASTLQ6HA08 431 aaPredicted RBP11.17□□□□□ -0.62
MDH1-212ENST00000485155 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
MDH1-212ENST00000485155 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
MDH1-212ENST00000485155 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
MDH1-212ENST00000485155 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
MDH1-212ENST00000485155 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
MDH1-212ENST00000485155 MAP3K13O43283 966 aa11.1□□□□□ -0.63
MDH1-212ENST00000485155 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
MDH1-212ENST00000485155 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
MDH1-212ENST00000485155 C7P10643 843 aa11.07□□□□□ -0.64
MDH1-212ENST00000485155 NUBP1P53384 320 aa11.07□□□□□ -0.64
MDH1-212ENST00000485155 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
MDH1-212ENST00000485155 TRPC6Q9Y210 931 aa11.06□□□□□ -0.64
MDH1-212ENST00000485155 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
MDH1-212ENST00000485155 TIE1P35590 1138 aa11.02□□□□□ -0.65
MDH1-212ENST00000485155 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
MDH1-212ENST00000485155 FAM212AQ96EL1 285 aa11□□□□□ -0.65
MDH1-212ENST00000485155 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
MDH1-212ENST00000485155 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
MDH1-212ENST00000485155 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
MDH1-212ENST00000485155 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
MDH1-212ENST00000485155 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
MDH1-212ENST00000485155 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
MDH1-212ENST00000485155 IFNL1Q8IU54 200 aa10.93□□□□□ -0.66
MDH1-212ENST00000485155 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
MDH1-212ENST00000485155 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
MDH1-212ENST00000485155 DCAF8Q5TAQ9 597 aa10.89□□□□□ -0.67
MDH1-212ENST00000485155 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
MDH1-212ENST00000485155 SEC24BO95487 1268 aa10.87□□□□□ -0.67
MDH1-212ENST00000485155 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
MDH1-212ENST00000485155 IER5LQ5T953 404 aa10.86□□□□□ -0.67
MDH1-212ENST00000485155 PYGBP11216 843 aa10.85□□□□□ -0.67
MDH1-212ENST00000485155 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
MDH1-212ENST00000485155 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
MDH1-212ENST00000485155 POTEMA6NI47 508 aa10.8□□□□□ -0.68
MDH1-212ENST00000485155 GSE1Q14687 1217 aa10.78□□□□□ -0.68
MDH1-212ENST00000485155 POTEGQ6S5H5 508 aa10.77□□□□□ -0.69
MDH1-212ENST00000485155 PCDHB8Q9UN66 801 aa10.77□□□□□ -0.69
MDH1-212ENST00000485155 PLCG2P16885 1265 aa10.75□□□□□ -0.69
MDH1-212ENST00000485155 PLSCR2Q9NRY7 297 aa10.73□□□□□ -0.69
MDH1-212ENST00000485155 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
MDH1-212ENST00000485155 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
MDH1-212ENST00000485155 FAM163AQ96GL9 167 aaPredicted RBP10.71□□□□□ -0.69
MDH1-212ENST00000485155 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
MDH1-212ENST00000485155 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
MDH1-212ENST00000485155 IFNLR1Q8IU57 520 aaPredicted RBP10.68□□□□□ -0.7
MDH1-212ENST00000485155 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
MDH1-212ENST00000485155 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
MDH1-212ENST00000485155 SLAIN1Q8ND83 568 aa10.65□□□□□ -0.7
MDH1-212ENST00000485155 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
MDH1-212ENST00000485155 PCDH10Q9P2E7 1040 aa10.61□□□□□ -0.71
MDH1-212ENST00000485155 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
MDH1-212ENST00000485155 PSEN1P49768 467 aa10.6□□□□□ -0.71
MDH1-212ENST00000485155 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
MDH1-212ENST00000485155 PDCD7Q8N8D1 485 aaKnown RBP10.57□□□□□ -0.72
MDH1-212ENST00000485155 PDAP1Q13442 181 aaKnown RBP10.56□□□□□ -0.72
MDH1-212ENST00000485155 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.55□□□□□ -0.72
MDH1-212ENST00000485155 ST18O60284 1047 aa10.52□□□□□ -0.73
MDH1-212ENST00000485155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.73
MDH1-212ENST00000485155 L3MBTL3Q96JM7 780 aaPredicted RBP10.49□□□□□ -0.73
MDH1-212ENST00000485155 CABP2Q9NPB3 220 aa10.49□□□□□ -0.73
MDH1-212ENST00000485155 C3orf67Q6ZVT6 689 aa10.48□□□□□ -0.73
MDH1-212ENST00000485155 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
MDH1-212ENST00000485155 SNPHO15079 494 aa10.46□□□□□ -0.73
MDH1-212ENST00000485155 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
MDH1-212ENST00000485155 CDAN1Q8IWY9 1227 aa10.44□□□□□ -0.74
MDH1-212ENST00000485155 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
MDH1-212ENST00000485155 DPY19L2Q6NUT2 758 aa10.41□□□□□ -0.74
MDH1-212ENST00000485155 G3V3G9 751 aa10.37□□□□□ -0.75
MDH1-212ENST00000485155 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
MDH1-212ENST00000485155 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
MDH1-212ENST00000485155 MARVELD3Q96A59 401 aa10.35□□□□□ -0.75
MDH1-212ENST00000485155 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
MDH1-212ENST00000485155 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
MDH1-212ENST00000485155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.28□□□□□ -0.76
MDH1-212ENST00000485155 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
MDH1-212ENST00000485155 EMP3P54852 163 aa10.28□□□□□ -0.76
MDH1-212ENST00000485155 ZFP91Q96JP5 570 aaPredicted RBP10.28□□□□□ -0.76
MDH1-212ENST00000485155 SOX12O15370 315 aa10.25□□□□□ -0.77
MDH1-212ENST00000485155 HOXB3P14651 431 aaPredicted RBP10.23□□□□□ -0.77
MDH1-212ENST00000485155 MICALL2Q8IY33 904 aa10.22□□□□□ -0.77
MDH1-212ENST00000485155 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
MDH1-212ENST00000485155 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
MDH1-212ENST00000485155 PHF8Q9UPP1 1060 aa10.21□□□□□ -0.77
MDH1-212ENST00000485155 FAM205CA6NFA0 338 aa10.2□□□□□ -0.78
MDH1-212ENST00000485155 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
MDH1-212ENST00000485155 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
MDH1-212ENST00000485155 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
MDH1-212ENST00000485155 SPNS2Q8IVW8 549 aa10.18□□□□□ -0.78
MDH1-212ENST00000485155 ZNF710Q8N1W2 664 aa10.18□□□□□ -0.78
MDH1-212ENST00000485155 TAOK2Q9UL54 1235 aa10.18□□□□□ -0.78
MDH1-212ENST00000485155 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
MDH1-212ENST00000485155 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
MDH1-212ENST00000485155 HOXB1P14653 301 aaPredicted RBP10.16□□□□□ -0.78
MDH1-212ENST00000485155 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
MDH1-212ENST00000485155 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
MDH1-212ENST00000485155 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
MDH1-212ENST00000485155 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms