RNA–Protein interactions for RNA: ENST00000485090.1

RABGAP1-211, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 331 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-211ENST00000485090 C7P10643 843 aa11.77□□□□□ -0.53
RABGAP1-211ENST00000485090 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
RABGAP1-211ENST00000485090 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
RABGAP1-211ENST00000485090 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
RABGAP1-211ENST00000485090 ATMINO43313 823 aaPredicted RBP11.71□□□□□ -0.53
RABGAP1-211ENST00000485090 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
RABGAP1-211ENST00000485090 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.53
RABGAP1-211ENST00000485090 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
RABGAP1-211ENST00000485090 LCE2DQ5TA82 110 aaPredicted RBP11.67□□□□□ -0.54
RABGAP1-211ENST00000485090 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
RABGAP1-211ENST00000485090 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
RABGAP1-211ENST00000485090 CDAN1Q8IWY9 1227 aa11.52□□□□□ -0.57
RABGAP1-211ENST00000485090 TSPYL2Q9H2G4 693 aaPredicted RBP11.52□□□□□ -0.57
RABGAP1-211ENST00000485090 PROM2Q8N271 834 aa11.46□□□□□ -0.57
RABGAP1-211ENST00000485090 POTEFA5A3E0 1075 aa11.45□□□□□ -0.58
RABGAP1-211ENST00000485090 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
RABGAP1-211ENST00000485090 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
RABGAP1-211ENST00000485090 SEC24BO95487 1268 aa11.43□□□□□ -0.58
RABGAP1-211ENST00000485090 KIF12Q96FN5 646 aa11.43□□□□□ -0.58
RABGAP1-211ENST00000485090 TIE1P35590 1138 aa11.39□□□□□ -0.59
RABGAP1-211ENST00000485090 FKBP8Q14318 412 aa11.37□□□□□ -0.59
RABGAP1-211ENST00000485090 TRPC6Q9Y210 931 aa11.37□□□□□ -0.59
RABGAP1-211ENST00000485090 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
RABGAP1-211ENST00000485090 MAP3K13O43283 966 aa11.33□□□□□ -0.6
RABGAP1-211ENST00000485090 ST18O60284 1047 aa11.31□□□□□ -0.6
RABGAP1-211ENST00000485090 SLAIN1Q8ND83 568 aa11.31□□□□□ -0.6
RABGAP1-211ENST00000485090 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
RABGAP1-211ENST00000485090 IER5LQ5T953 404 aa11.28□□□□□ -0.6
RABGAP1-211ENST00000485090 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
RABGAP1-211ENST00000485090 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
RABGAP1-211ENST00000485090 TRIM35Q9UPQ4 493 aa11.25□□□□□ -0.61
RABGAP1-211ENST00000485090 SPNS2Q8IVW8 549 aa11.23□□□□□ -0.61
RABGAP1-211ENST00000485090 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
RABGAP1-211ENST00000485090 MIER1Q8N108 512 aa11.19□□□□□ -0.62
RABGAP1-211ENST00000485090 TMEM121BQ9BXQ6 578 aaPredicted RBP11.17□□□□□ -0.62
RABGAP1-211ENST00000485090 PLCG2P16885 1265 aa11.16□□□□□ -0.62
RABGAP1-211ENST00000485090 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
RABGAP1-211ENST00000485090 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
RABGAP1-211ENST00000485090 PLCD3Q8N3E9 789 aa11.15□□□□□ -0.62
RABGAP1-211ENST00000485090 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
RABGAP1-211ENST00000485090 SNPHO15079 494 aa11.13□□□□□ -0.63
RABGAP1-211ENST00000485090 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
RABGAP1-211ENST00000485090 ZBTB47Q9UFB7 747 aaPredicted RBP11.09□□□□□ -0.63
RABGAP1-211ENST00000485090 MARVELD3Q96A59 401 aa11.06□□□□□ -0.64
RABGAP1-211ENST00000485090 IFNL1Q8IU54 200 aa11.05□□□□□ -0.64
RABGAP1-211ENST00000485090 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
RABGAP1-211ENST00000485090 IRX5P78411 483 aaPredicted RBP11.03□□□□□ -0.64
RABGAP1-211ENST00000485090 OCEL1Q9H607 264 aa11□□□□□ -0.65
RABGAP1-211ENST00000485090 EMP3P54852 163 aa10.96□□□□□ -0.65
RABGAP1-211ENST00000485090 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
RABGAP1-211ENST00000485090 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
RABGAP1-211ENST00000485090 NUBP1P53384 320 aa10.92□□□□□ -0.66
RABGAP1-211ENST00000485090 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
RABGAP1-211ENST00000485090 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
RABGAP1-211ENST00000485090 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
RABGAP1-211ENST00000485090 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
RABGAP1-211ENST00000485090 KRTAP3-2Q9BYR7 98 aa10.88□□□□□ -0.67
RABGAP1-211ENST00000485090 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
RABGAP1-211ENST00000485090 POTEB3A0JP26 581 aa10.81□□□□□ -0.68
RABGAP1-211ENST00000485090 POTEBQ6S5H4 581 aa10.81□□□□□ -0.68
RABGAP1-211ENST00000485090 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
RABGAP1-211ENST00000485090 L3MBTL3Q96JM7 780 aaPredicted RBP10.8□□□□□ -0.68
RABGAP1-211ENST00000485090 PYGBP11216 843 aa10.77□□□□□ -0.69
RABGAP1-211ENST00000485090 GOLGA2Q08379 1002 aa10.76□□□□□ -0.69
RABGAP1-211ENST00000485090 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
RABGAP1-211ENST00000485090 PDCD7Q8N8D1 485 aaKnown RBP10.75□□□□□ -0.69
RABGAP1-211ENST00000485090 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
RABGAP1-211ENST00000485090 GSE1Q14687 1217 aa10.74□□□□□ -0.69
RABGAP1-211ENST00000485090 IFNLR1Q8IU57 520 aaPredicted RBP10.72□□□□□ -0.69
RABGAP1-211ENST00000485090 SPOCK2Q92563 424 aa10.72□□□□□ -0.69
RABGAP1-211ENST00000485090 RNF166Q96A37 237 aaPredicted RBP10.7□□□□□ -0.7
RABGAP1-211ENST00000485090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.67□□□□□ -0.71e-15■■■■■ 31.7
RABGAP1-211ENST00000485090 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
RABGAP1-211ENST00000485090 ERBB3P21860 1342 aa10.63□□□□□ -0.71
RABGAP1-211ENST00000485090 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
RABGAP1-211ENST00000485090 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
RABGAP1-211ENST00000485090 G3V3G9 751 aa10.61□□□□□ -0.71
RABGAP1-211ENST00000485090 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
RABGAP1-211ENST00000485090 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
RABGAP1-211ENST00000485090 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
RABGAP1-211ENST00000485090 HOXB3P14651 431 aaPredicted RBP10.58□□□□□ -0.72
RABGAP1-211ENST00000485090 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
RABGAP1-211ENST00000485090 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
RABGAP1-211ENST00000485090 PSEN1P49768 467 aa10.53□□□□□ -0.72
RABGAP1-211ENST00000485090 BOLA1Q9Y3E2 137 aa10.53□□□□□ -0.72
RABGAP1-211ENST00000485090 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
RABGAP1-211ENST00000485090 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
RABGAP1-211ENST00000485090 RIMBP2O15034 1052 aa10.51□□□□□ -0.73
RABGAP1-211ENST00000485090 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
RABGAP1-211ENST00000485090 PTGER2P43116 358 aa10.48□□□□□ -0.73
RABGAP1-211ENST00000485090 PDAP1Q13442 181 aaKnown RBP10.45□□□□□ -0.74
RABGAP1-211ENST00000485090 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
RABGAP1-211ENST00000485090 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
RABGAP1-211ENST00000485090 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
RABGAP1-211ENST00000485090 ANKRD13DQ6ZTN6 518 aa10.37□□□□□ -0.75
RABGAP1-211ENST00000485090 RIOK3O14730 519 aaKnown RBP10.34□□□□□ -0.75
RABGAP1-211ENST00000485090 GPR153Q6NV75 609 aa10.3□□□□□ -0.76
RABGAP1-211ENST00000485090 PLA2G2EQ9NZK7 142 aa10.3□□□□□ -0.76
RABGAP1-211ENST00000485090 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
RABGAP1-211ENST00000485090 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms