RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
PCDH17-202ENST00000484979 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.41■■□□□ 1.02
PCDH17-202ENST00000484979 NPM2Q86SE8 214 aaKnown RBP21.41■■□□□ 1.02
PCDH17-202ENST00000484979 C14orf37Q86TY3 774 aa21.39■■□□□ 1.02
PCDH17-202ENST00000484979 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
PCDH17-202ENST00000484979 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
PCDH17-202ENST00000484979 RGL3Q3MIN7 710 aa21.35■■□□□ 1.01
PCDH17-202ENST00000484979 HSP90AA1P07900 732 aaKnown RBP21.32■■□□□ 1
PCDH17-202ENST00000484979 CEP162Q5TB80 1403 aa21.31■■□□□ 1
PCDH17-202ENST00000484979 CDCA8Q53HL2 280 aa21.31■■□□□ 1
PCDH17-202ENST00000484979 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
PCDH17-202ENST00000484979 FKBP8Q14318 412 aa21.29■■□□□ 1
PCDH17-202ENST00000484979 A0A0G2JS52 829 aa21.28■■□□□ 1
PCDH17-202ENST00000484979 CEP164Q9UPV0 1460 aa21.27■■□□□ 1
PCDH17-202ENST00000484979 TNIKQ9UKE5 1360 aa21.25■□□□□ 0.99
PCDH17-202ENST00000484979 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
PCDH17-202ENST00000484979 CCDC136Q96JN2 1154 aa21.22■□□□□ 0.99
PCDH17-202ENST00000484979 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
PCDH17-202ENST00000484979 ZBTB7CA1YPR0 619 aa21.2■□□□□ 0.98
PCDH17-202ENST00000484979 CFAP53Q96M91 514 aa21.2■□□□□ 0.98
PCDH17-202ENST00000484979 PLEKHG5O94827 1062 aa21.19■□□□□ 0.98
PCDH17-202ENST00000484979 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
PCDH17-202ENST00000484979 MYH16Q9H6N6 1097 aa21.16■□□□□ 0.98
PCDH17-202ENST00000484979 CARMIL1Q5VZK9 1371 aa21.16■□□□□ 0.98
PCDH17-202ENST00000484979 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.98
PCDH17-202ENST00000484979 FHAD1B1AJZ9 1412 aa21.14■□□□□ 0.97
PCDH17-202ENST00000484979 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
PCDH17-202ENST00000484979 CCNB3Q8WWL7 1395 aa21.13■□□□□ 0.97
PCDH17-202ENST00000484979 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
PCDH17-202ENST00000484979 ANP32BQ92688 251 aaKnown RBP21.12■□□□□ 0.97
PCDH17-202ENST00000484979 POGKQ9P215 609 aa21.11■□□□□ 0.97
PCDH17-202ENST00000484979 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
PCDH17-202ENST00000484979 CUX2O14529 1486 aa21.09■□□□□ 0.97
PCDH17-202ENST00000484979 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
PCDH17-202ENST00000484979 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
PCDH17-202ENST00000484979 PPM1GO15355 546 aaPredicted RBP21.04■□□□□ 0.96
PCDH17-202ENST00000484979 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
PCDH17-202ENST00000484979 NUDCQ9Y266 331 aa21.02■□□□□ 0.96
PCDH17-202ENST00000484979 KANK1Q14678 1352 aa21■□□□□ 0.95
PCDH17-202ENST00000484979 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
PCDH17-202ENST00000484979 MIER1Q8N108 512 aa20.98■□□□□ 0.95
PCDH17-202ENST00000484979 MLECQ14165 292 aa20.96■□□□□ 0.95
PCDH17-202ENST00000484979 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
PCDH17-202ENST00000484979 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
PCDH17-202ENST00000484979 ARXQ96QS3 562 aa20.92■□□□□ 0.94
PCDH17-202ENST00000484979 EFCAB2Q5VUJ9 269 aa20.9■□□□□ 0.94
PCDH17-202ENST00000484979 GGT6Q6P531 493 aa20.9■□□□□ 0.94
PCDH17-202ENST00000484979 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
PCDH17-202ENST00000484979 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
PCDH17-202ENST00000484979 DCAF11Q8TEB1 546 aa20.88■□□□□ 0.93
PCDH17-202ENST00000484979 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
PCDH17-202ENST00000484979 SOGA1O94964 1423 aa20.88■□□□□ 0.93
PCDH17-202ENST00000484979 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
PCDH17-202ENST00000484979 TMF1P82094 1093 aa20.86■□□□□ 0.93
PCDH17-202ENST00000484979 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
PCDH17-202ENST00000484979 PNNQ9H307 717 aaKnown RBP20.82■□□□□ 0.92
PCDH17-202ENST00000484979 IRX6P78412 446 aaPredicted RBP20.82■□□□□ 0.92
PCDH17-202ENST00000484979 FTSJ3Q8IY81 847 aaKnown RBP20.82■□□□□ 0.92
PCDH17-202ENST00000484979 MYO15BQ96JP2 1530 aa20.81■□□□□ 0.92
PCDH17-202ENST00000484979 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
PCDH17-202ENST00000484979 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
PCDH17-202ENST00000484979 U2SURPO15042 1029 aaKnown RBP20.78■□□□□ 0.92
PCDH17-202ENST00000484979 TNNT2P45379 298 aaPredicted RBP20.78■□□□□ 0.92
PCDH17-202ENST00000484979 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
PCDH17-202ENST00000484979 CHMP4BQ9H444 224 aaKnown RBP20.78■□□□□ 0.92
PCDH17-202ENST00000484979 EIF5BO60841 1220 aaKnown RBP20.77■□□□□ 0.92
PCDH17-202ENST00000484979 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.91
PCDH17-202ENST00000484979 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
PCDH17-202ENST00000484979 FMN1Q68DA7 1419 aa20.76■□□□□ 0.91
PCDH17-202ENST00000484979 PKD2Q13563 968 aa20.75■□□□□ 0.91
PCDH17-202ENST00000484979 MS4A1P11836 297 aa20.73■□□□□ 0.91
PCDH17-202ENST00000484979 BECN1Q14457 450 aa20.73■□□□□ 0.91
PCDH17-202ENST00000484979 VPS8Q8N3P4 1428 aa20.73■□□□□ 0.91
PCDH17-202ENST00000484979 NPHP1O15259 732 aa20.72■□□□□ 0.91
PCDH17-202ENST00000484979 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
PCDH17-202ENST00000484979 RSPH4AQ5TD94 716 aa20.7■□□□□ 0.9
PCDH17-202ENST00000484979 ARHGAP35Q9NRY4 1499 aa20.7■□□□□ 0.9
PCDH17-202ENST00000484979 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
PCDH17-202ENST00000484979 SAFB2Q14151 953 aaKnown RBP eCLIP20.68■□□□□ 0.9
PCDH17-202ENST00000484979 CASC1Q6TDU7 716 aa20.68■□□□□ 0.9
PCDH17-202ENST00000484979 JPH4Q96JJ6 628 aa20.67■□□□□ 0.9
PCDH17-202ENST00000484979 MORC1Q86VD1 984 aa20.67■□□□□ 0.9
PCDH17-202ENST00000484979 NCLP19338 710 aaKnown RBP20.67■□□□□ 0.9
PCDH17-202ENST00000484979 CDK11BP21127 795 aaKnown RBP20.66■□□□□ 0.9
PCDH17-202ENST00000484979 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
PCDH17-202ENST00000484979 ANKRD30AQ9BXX3 1397 aa20.66■□□□□ 0.9
PCDH17-202ENST00000484979 SOX12O15370 315 aa20.65■□□□□ 0.9
PCDH17-202ENST00000484979 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
PCDH17-202ENST00000484979 STK26Q9P289 416 aa20.65■□□□□ 0.9
PCDH17-202ENST00000484979 KIF3BO15066 747 aa20.65■□□□□ 0.9
PCDH17-202ENST00000484979 FRAT1Q92837 279 aaPredicted RBP20.65■□□□□ 0.9
PCDH17-202ENST00000484979 NUP155O75694 1391 aa20.64■□□□□ 0.9
PCDH17-202ENST00000484979 DDRGK1Q96HY6 314 aa20.64■□□□□ 0.89
PCDH17-202ENST00000484979 GOLGA6L22H0YM25 854 aa20.63■□□□□ 0.89
PCDH17-202ENST00000484979 KANK4Q5T7N3 995 aaPredicted RBP20.61■□□□□ 0.89
PCDH17-202ENST00000484979 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
PCDH17-202ENST00000484979 ANP32EQ9BTT0 268 aa20.6■□□□□ 0.89
PCDH17-202ENST00000484979 SPAG9O60271 1321 aaKnown RBP20.6■□□□□ 0.89
PCDH17-202ENST00000484979 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
PCDH17-202ENST00000484979 MPHOSPH9Q99550 1183 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms