RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 RASEFQ8IZ41 740 aa17.2■□□□□ 0.34
POLR2B-209ENST00000484821 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
POLR2B-209ENST00000484821 KIF12Q96FN5 646 aa17.16■□□□□ 0.34
POLR2B-209ENST00000484821 ASTLQ6HA08 431 aaPredicted RBP17.13■□□□□ 0.33
POLR2B-209ENST00000484821 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
POLR2B-209ENST00000484821 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
POLR2B-209ENST00000484821 NUBP1P53384 320 aa17.07■□□□□ 0.32
POLR2B-209ENST00000484821 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
POLR2B-209ENST00000484821 MAP3K13O43283 966 aa17.06■□□□□ 0.32
POLR2B-209ENST00000484821 FBXO3Q9UK99 471 aa17■□□□□ 0.31
POLR2B-209ENST00000484821 TRPC6Q9Y210 931 aa16.99■□□□□ 0.31
POLR2B-209ENST00000484821 METRNQ9UJH8 293 aa16.98■□□□□ 0.31
POLR2B-209ENST00000484821 ATN1P54259 1190 aaPredicted RBP16.97■□□□□ 0.31
POLR2B-209ENST00000484821 SLC39A7Q92504 469 aa16.97■□□□□ 0.31
POLR2B-209ENST00000484821 C7P10643 843 aa16.96■□□□□ 0.31
POLR2B-209ENST00000484821 OTUD5Q96G74 571 aa16.96■□□□□ 0.31
POLR2B-209ENST00000484821 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
POLR2B-209ENST00000484821 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
POLR2B-209ENST00000484821 TIE1P35590 1138 aa16.9■□□□□ 0.3
POLR2B-209ENST00000484821 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
POLR2B-209ENST00000484821 PCDHB13Q9Y5F0 798 aa16.87■□□□□ 0.29
POLR2B-209ENST00000484821 POTEJP0CG39 1038 aa16.83■□□□□ 0.28
POLR2B-209ENST00000484821 TTLL13PA6NNM8 815 aa16.82■□□□□ 0.28
POLR2B-209ENST00000484821 VASPP50552 380 aaPredicted RBP16.81■□□□□ 0.28
POLR2B-209ENST00000484821 IFNL1Q8IU54 200 aa16.8■□□□□ 0.28
POLR2B-209ENST00000484821 POTEFA5A3E0 1075 aa16.78■□□□□ 0.28
POLR2B-209ENST00000484821 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
POLR2B-209ENST00000484821 KLHL34Q8N239 644 aa16.72■□□□□ 0.27
POLR2B-209ENST00000484821 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
POLR2B-209ENST00000484821 PYGBP11216 843 aa16.7■□□□□ 0.26
POLR2B-209ENST00000484821 MAMSTRQ6ZN01 415 aa16.69■□□□□ 0.26
POLR2B-209ENST00000484821 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
POLR2B-209ENST00000484821 TMEM106CQ9BVX2 250 aa16.65■□□□□ 0.26
POLR2B-209ENST00000484821 IER5LQ5T953 404 aa16.64■□□□□ 0.25
POLR2B-209ENST00000484821 SEC24BO95487 1268 aa16.63■□□□□ 0.25
POLR2B-209ENST00000484821 GSE1Q14687 1217 aa16.6■□□□□ 0.25
POLR2B-209ENST00000484821 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
POLR2B-209ENST00000484821 PCDHB8Q9UN66 801 aa16.58■□□□□ 0.24
POLR2B-209ENST00000484821 IFNLR1Q8IU57 520 aaPredicted RBP16.55■□□□□ 0.24
POLR2B-209ENST00000484821 CHRM1P11229 460 aaPredicted RBP16.49■□□□□ 0.23
POLR2B-209ENST00000484821 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
POLR2B-209ENST00000484821 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
POLR2B-209ENST00000484821 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
POLR2B-209ENST00000484821 POTEMA6NI47 508 aa16.44■□□□□ 0.22
POLR2B-209ENST00000484821 PLCG2P16885 1265 aa16.44■□□□□ 0.22
POLR2B-209ENST00000484821 POTEGQ6S5H5 508 aa16.41■□□□□ 0.22
POLR2B-209ENST00000484821 LCE2DQ5TA82 110 aaPredicted RBP16.39■□□□□ 0.21
POLR2B-209ENST00000484821 OCEL1Q9H607 264 aa16.39■□□□□ 0.21
POLR2B-209ENST00000484821 FAM163AQ96GL9 167 aaPredicted RBP16.37■□□□□ 0.21
POLR2B-209ENST00000484821 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
POLR2B-209ENST00000484821 PSEN1P49768 467 aa16.32■□□□□ 0.2
POLR2B-209ENST00000484821 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
POLR2B-209ENST00000484821 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
POLR2B-209ENST00000484821 PLSCR2Q9NRY7 297 aa16.25■□□□□ 0.19
POLR2B-209ENST00000484821 MKRN3Q13064 507 aaKnown RBP16.24■□□□□ 0.19
POLR2B-209ENST00000484821 PDAP1Q13442 181 aaKnown RBP16.24■□□□□ 0.19
POLR2B-209ENST00000484821 PDCD7Q8N8D1 485 aaKnown RBP16.24■□□□□ 0.19
POLR2B-209ENST00000484821 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
POLR2B-209ENST00000484821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.186e-6■□□□□ 8.9
POLR2B-209ENST00000484821 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
POLR2B-209ENST00000484821 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
POLR2B-209ENST00000484821 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
POLR2B-209ENST00000484821 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
POLR2B-209ENST00000484821 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
POLR2B-209ENST00000484821 ST18O60284 1047 aa16.09■□□□□ 0.17
POLR2B-209ENST00000484821 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
POLR2B-209ENST00000484821 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
POLR2B-209ENST00000484821 SNPHO15079 494 aa15.99■□□□□ 0.15
POLR2B-209ENST00000484821 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
POLR2B-209ENST00000484821 EFCAB3Q8N7B9 438 aa15.94■□□□□ 0.14
POLR2B-209ENST00000484821 RIOK3O14730 519 aaKnown RBP15.93■□□□□ 0.14
POLR2B-209ENST00000484821 CDAN1Q8IWY9 1227 aa15.93■□□□□ 0.14
POLR2B-209ENST00000484821 TMEM121BQ9BXQ6 578 aaPredicted RBP15.92■□□□□ 0.14
POLR2B-209ENST00000484821 BOLA1Q9Y3E2 137 aa15.92■□□□□ 0.14
POLR2B-209ENST00000484821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
POLR2B-209ENST00000484821 G3V3G9 751 aa15.86■□□□□ 0.13
POLR2B-209ENST00000484821 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
POLR2B-209ENST00000484821 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
POLR2B-209ENST00000484821 MARVELD3Q96A59 401 aa15.82■□□□□ 0.12
POLR2B-209ENST00000484821 SOX12O15370 315 aa15.8■□□□□ 0.12
POLR2B-209ENST00000484821 MS4A4AQ96JQ5 239 aa15.74■□□□□ 0.11
POLR2B-209ENST00000484821 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
POLR2B-209ENST00000484821 HOXB3P14651 431 aaPredicted RBP15.71■□□□□ 0.11
POLR2B-209ENST00000484821 EMP3P54852 163 aa15.7■□□□□ 0.1
POLR2B-209ENST00000484821 MICALL2Q8IY33 904 aa15.7■□□□□ 0.1
POLR2B-209ENST00000484821 BCL11BQ9C0K0 894 aaPredicted RBP15.68■□□□□ 0.1
POLR2B-209ENST00000484821 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
POLR2B-209ENST00000484821 ECM2O94769 699 aaPredicted RBP15.66■□□□□ 0.1
POLR2B-209ENST00000484821 TMEM92Q6UXU6 159 aa15.65■□□□□ 0.1
POLR2B-209ENST00000484821 PKD2Q13563 968 aa15.64■□□□□ 0.09
POLR2B-209ENST00000484821 POTEB3A0JP26 581 aa15.63■□□□□ 0.09
POLR2B-209ENST00000484821 POTEBQ6S5H4 581 aa15.63■□□□□ 0.09
POLR2B-209ENST00000484821 STK24Q9Y6E0 443 aa15.62■□□□□ 0.09
POLR2B-209ENST00000484821 FAM205CA6NFA0 338 aa15.6■□□□□ 0.09
POLR2B-209ENST00000484821 NLRP6P59044 892 aa15.6■□□□□ 0.09
POLR2B-209ENST00000484821 DOK7Q18PE1 504 aa15.6■□□□□ 0.09
POLR2B-209ENST00000484821 FBXO22Q8NEZ5 403 aa15.6■□□□□ 0.09
POLR2B-209ENST00000484821 HS3ST6Q96QI5 342 aa15.6■□□□□ 0.09
POLR2B-209ENST00000484821 ZNF710Q8N1W2 664 aa15.58■□□□□ 0.08
POLR2B-209ENST00000484821 STK25O00506 426 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms