RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 CCDC61Q9Y6R9 512 aa19.08■□□□□ 0.64
UBR3-210ENST00000484596 IFNLR1Q8IU57 520 aaPredicted RBP19.03■□□□□ 0.64
UBR3-210ENST00000484596 GALR2O43603 387 aaPredicted RBP19.02■□□□□ 0.64
UBR3-210ENST00000484596 FAM212AQ96EL1 285 aa18.97■□□□□ 0.63
UBR3-210ENST00000484596 KIF12Q96FN5 646 aa18.93■□□□□ 0.62
UBR3-210ENST00000484596 POTEIP0CG38 1075 aa18.92■□□□□ 0.62
UBR3-210ENST00000484596 DCAF8Q5TAQ9 597 aa18.91■□□□□ 0.62
UBR3-210ENST00000484596 MS4A3Q96HJ5 214 aa18.91■□□□□ 0.62
UBR3-210ENST00000484596 DCBLD2Q96PD2 775 aa18.89■□□□□ 0.61
UBR3-210ENST00000484596 MAP3K13O43283 966 aa18.86■□□□□ 0.61
UBR3-210ENST00000484596 SPOCK2Q92563 424 aa18.85■□□□□ 0.61
UBR3-210ENST00000484596 GSE1Q14687 1217 aa18.76■□□□□ 0.59
UBR3-210ENST00000484596 PYGBP11216 843 aa18.74■□□□□ 0.59
UBR3-210ENST00000484596 PCDHB13Q9Y5F0 798 aa18.73■□□□□ 0.59
UBR3-210ENST00000484596 SGIP1Q9BQI5 828 aa18.71■□□□□ 0.59
UBR3-210ENST00000484596 TRPC6Q9Y210 931 aa18.7■□□□□ 0.58
UBR3-210ENST00000484596 CIZ1Q9ULV3 898 aaPredicted RBP18.67■□□□□ 0.58
UBR3-210ENST00000484596 IFNL1Q8IU54 200 aa18.66■□□□□ 0.58
UBR3-210ENST00000484596 ASTLQ6HA08 431 aaPredicted RBP18.65■□□□□ 0.58
UBR3-210ENST00000484596 ATMINO43313 823 aaPredicted RBP18.64■□□□□ 0.57
UBR3-210ENST00000484596 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
UBR3-210ENST00000484596 BMP2KQ9NSY1 1161 aaPredicted RBP18.6■□□□□ 0.57
UBR3-210ENST00000484596 TIE1P35590 1138 aa18.58■□□□□ 0.56
UBR3-210ENST00000484596 CHRM1P11229 460 aaPredicted RBP18.57■□□□□ 0.56
UBR3-210ENST00000484596 ATN1P54259 1190 aaPredicted RBP18.56■□□□□ 0.56
UBR3-210ENST00000484596 PCDHB8Q9UN66 801 aa18.55■□□□□ 0.56
UBR3-210ENST00000484596 TTLL13PA6NNM8 815 aa18.51■□□□□ 0.55
UBR3-210ENST00000484596 LHX8Q68G74 356 aa18.48■□□□□ 0.55
UBR3-210ENST00000484596 ZNF467Q7Z7K2 595 aaPredicted RBP18.44■□□□□ 0.54
UBR3-210ENST00000484596 SLC39A7Q92504 469 aa18.44■□□□□ 0.54
UBR3-210ENST00000484596 TMEM106CQ9BVX2 250 aa18.44■□□□□ 0.54
UBR3-210ENST00000484596 METRNQ9UJH8 293 aa18.42■□□□□ 0.54
UBR3-210ENST00000484596 C7P10643 843 aa18.41■□□□□ 0.54
UBR3-210ENST00000484596 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
UBR3-210ENST00000484596 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
UBR3-210ENST00000484596 POTEB2H3BUK9 544 aa18.32■□□□□ 0.52
UBR3-210ENST00000484596 PSEN1P49768 467 aa18.3■□□□□ 0.52
UBR3-210ENST00000484596 POTEFA5A3E0 1075 aa18.26■□□□□ 0.51
UBR3-210ENST00000484596 PDAP1Q13442 181 aaKnown RBP18.26■□□□□ 0.51
UBR3-210ENST00000484596 IER5LQ5T953 404 aa18.25■□□□□ 0.51
UBR3-210ENST00000484596 COLQQ9Y215 455 aaPredicted RBP18.22■□□□□ 0.51
UBR3-210ENST00000484596 RNF25Q96BH1 459 aaPredicted RBP18.21■□□□□ 0.51
UBR3-210ENST00000484596 SEC24BO95487 1268 aa18.2■□□□□ 0.5
UBR3-210ENST00000484596 PKD2Q13563 968 aa18.19■□□□□ 0.5
UBR3-210ENST00000484596 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
UBR3-210ENST00000484596 POTEJP0CG39 1038 aa18.16■□□□□ 0.5
UBR3-210ENST00000484596 ECM2O94769 699 aaPredicted RBP18.15■□□□□ 0.5
UBR3-210ENST00000484596 IRX5P78411 483 aaPredicted RBP18.12■□□□□ 0.49
UBR3-210ENST00000484596 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
UBR3-210ENST00000484596 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
UBR3-210ENST00000484596 PLCG2P16885 1265 aa18.08■□□□□ 0.48
UBR3-210ENST00000484596 MKRN3Q13064 507 aaKnown RBP18.08■□□□□ 0.48
UBR3-210ENST00000484596 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
UBR3-210ENST00000484596 OCEL1Q9H607 264 aa18.06■□□□□ 0.48
UBR3-210ENST00000484596 VGFO15240 615 aaPredicted RBP18.05■□□□□ 0.48
UBR3-210ENST00000484596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.03■□□□□ 0.48
UBR3-210ENST00000484596 ZFP91Q96JP5 570 aaPredicted RBP18.03■□□□□ 0.48
UBR3-210ENST00000484596 RGL2O15211 777 aa18.01■□□□□ 0.47
UBR3-210ENST00000484596 MAMSTRQ6ZN01 415 aa17.99■□□□□ 0.47
UBR3-210ENST00000484596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.97■□□□□ 0.47
UBR3-210ENST00000484596 PDCD7Q8N8D1 485 aaKnown RBP17.95■□□□□ 0.46
UBR3-210ENST00000484596 SCUBE2Q9NQ36 999 aa17.94■□□□□ 0.46
UBR3-210ENST00000484596 TAOK2Q9UL54 1235 aa17.94■□□□□ 0.46
UBR3-210ENST00000484596 EFCAB3Q8N7B9 438 aa17.93■□□□□ 0.46
UBR3-210ENST00000484596 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
UBR3-210ENST00000484596 AMER1Q5JTC6 1135 aaPredicted RBP17.89■□□□□ 0.45
UBR3-210ENST00000484596 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
UBR3-210ENST00000484596 STK24Q9Y6E0 443 aa17.84■□□□□ 0.45
UBR3-210ENST00000484596 STK25O00506 426 aa17.83■□□□□ 0.44
UBR3-210ENST00000484596 DPY19L2Q6NUT2 758 aa17.82■□□□□ 0.44
UBR3-210ENST00000484596 L3MBTL3Q96JM7 780 aaPredicted RBP17.78■□□□□ 0.44
UBR3-210ENST00000484596 SOX12O15370 315 aa17.77■□□□□ 0.44
UBR3-210ENST00000484596 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
UBR3-210ENST00000484596 SLAIN1Q8ND83 568 aa17.71■□□□□ 0.43
UBR3-210ENST00000484596 RTN4Q9NQC3 1192 aaKnown RBP17.7■□□□□ 0.42
UBR3-210ENST00000484596 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.69■□□□□ 0.42
UBR3-210ENST00000484596 MS4A4AQ96JQ5 239 aa17.68■□□□□ 0.42
UBR3-210ENST00000484596 BOLA1Q9Y3E2 137 aa17.67■□□□□ 0.42
UBR3-210ENST00000484596 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
UBR3-210ENST00000484596 G3V3G9 751 aa17.63■□□□□ 0.41
UBR3-210ENST00000484596 NLRP6P59044 892 aa17.63■□□□□ 0.41
UBR3-210ENST00000484596 MFRPQ9BY79 579 aa17.63■□□□□ 0.41
UBR3-210ENST00000484596 FBXO22Q8NEZ5 403 aa17.62■□□□□ 0.41
UBR3-210ENST00000484596 HS6ST3Q8IZP7 471 aa17.6■□□□□ 0.41
UBR3-210ENST00000484596 CHGAP10645 457 aaKnown RBP17.59■□□□□ 0.41
UBR3-210ENST00000484596 TMEM121BQ9BXQ6 578 aaPredicted RBP17.58■□□□□ 0.4
UBR3-210ENST00000484596 FAM163AQ96GL9 167 aaPredicted RBP17.54■□□□□ 0.4
UBR3-210ENST00000484596 MICALL2Q8IY33 904 aa17.53■□□□□ 0.4
UBR3-210ENST00000484596 LCE2DQ5TA82 110 aaPredicted RBP17.47■□□□□ 0.39
UBR3-210ENST00000484596 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
UBR3-210ENST00000484596 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
UBR3-210ENST00000484596 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
UBR3-210ENST00000484596 SNPHO15079 494 aa17.39■□□□□ 0.37
UBR3-210ENST00000484596 PPP1R37O75864 691 aa17.38■□□□□ 0.37
UBR3-210ENST00000484596 TMEM92Q6UXU6 159 aa17.38■□□□□ 0.37
UBR3-210ENST00000484596 POTEMA6NI47 508 aa17.35■□□□□ 0.37
UBR3-210ENST00000484596 ST18O60284 1047 aa17.35■□□□□ 0.37
UBR3-210ENST00000484596 POTEGQ6S5H5 508 aa17.34■□□□□ 0.37
UBR3-210ENST00000484596 HOXB3P14651 431 aaPredicted RBP17.23■□□□□ 0.35
UBR3-210ENST00000484596 RYDENQ9NUL5 291 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms