RNA–Protein interactions for RNA: ENST00000484538.1

MDH1-211, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-211ENST00000484538 PHF12Q96QT6 1004 aa17.54■□□□□ 0.4
MDH1-211ENST00000484538 AMER1Q5JTC6 1135 aaPredicted RBP17.48■□□□□ 0.39
MDH1-211ENST00000484538 CLCN6P51797 869 aa17.47■□□□□ 0.39
MDH1-211ENST00000484538 SPOCK2Q92563 424 aa17.46■□□□□ 0.39
MDH1-211ENST00000484538 FAM212AQ96EL1 285 aa17.44■□□□□ 0.38
MDH1-211ENST00000484538 GALR2O43603 387 aaPredicted RBP17.4■□□□□ 0.38
MDH1-211ENST00000484538 KIF12Q96FN5 646 aa17.4■□□□□ 0.38
MDH1-211ENST00000484538 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
MDH1-211ENST00000484538 DCAF8Q5TAQ9 597 aa17.38■□□□□ 0.37
MDH1-211ENST00000484538 MS4A3Q96HJ5 214 aa17.33■□□□□ 0.36
MDH1-211ENST00000484538 MAP3K13O43283 966 aa17.32■□□□□ 0.36
MDH1-211ENST00000484538 GSE1Q14687 1217 aa17.31■□□□□ 0.36
MDH1-211ENST00000484538 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
MDH1-211ENST00000484538 PYGBP11216 843 aa17.24■□□□□ 0.35
MDH1-211ENST00000484538 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
MDH1-211ENST00000484538 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
MDH1-211ENST00000484538 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
MDH1-211ENST00000484538 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
MDH1-211ENST00000484538 PCDHB13Q9Y5F0 798 aa17.18■□□□□ 0.34
MDH1-211ENST00000484538 IFNL1Q8IU54 200 aa17.16■□□□□ 0.34
MDH1-211ENST00000484538 DCBLD2Q96PD2 775 aa17.15■□□□□ 0.34
MDH1-211ENST00000484538 ASTLQ6HA08 431 aaPredicted RBP17.09■□□□□ 0.33
MDH1-211ENST00000484538 ATMINO43313 823 aaPredicted RBP17.06■□□□□ 0.32
MDH1-211ENST00000484538 BMP2KQ9NSY1 1161 aaPredicted RBP17.06■□□□□ 0.32
MDH1-211ENST00000484538 PCDHB8Q9UN66 801 aa17.06■□□□□ 0.32
MDH1-211ENST00000484538 TIE1P35590 1138 aa17.05■□□□□ 0.32
MDH1-211ENST00000484538 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
MDH1-211ENST00000484538 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
MDH1-211ENST00000484538 ATN1P54259 1190 aaPredicted RBP16.99■□□□□ 0.31
MDH1-211ENST00000484538 PKD2Q13563 968 aa16.99■□□□□ 0.31
MDH1-211ENST00000484538 TTLL13PA6NNM8 815 aa16.98■□□□□ 0.31
MDH1-211ENST00000484538 ZNF467Q7Z7K2 595 aaPredicted RBP16.98■□□□□ 0.31
MDH1-211ENST00000484538 RNF25Q96BH1 459 aaPredicted RBP16.94■□□□□ 0.3
MDH1-211ENST00000484538 TMEM106CQ9BVX2 250 aa16.9■□□□□ 0.3
MDH1-211ENST00000484538 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
MDH1-211ENST00000484538 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
MDH1-211ENST00000484538 PSEN1P49768 467 aa16.84■□□□□ 0.29
MDH1-211ENST00000484538 SLC39A7Q92504 469 aa16.83■□□□□ 0.28
MDH1-211ENST00000484538 PDAP1Q13442 181 aaKnown RBP16.82■□□□□ 0.28
MDH1-211ENST00000484538 RIOK3O14730 519 aaKnown RBP16.8■□□□□ 0.28
MDH1-211ENST00000484538 C7P10643 843 aa16.8■□□□□ 0.28
MDH1-211ENST00000484538 METRNQ9UJH8 293 aa16.8■□□□□ 0.28
MDH1-211ENST00000484538 POTEFA5A3E0 1075 aa16.77■□□□□ 0.28
MDH1-211ENST00000484538 RGL2O15211 777 aa16.76■□□□□ 0.27
MDH1-211ENST00000484538 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
MDH1-211ENST00000484538 IER5LQ5T953 404 aa16.73■□□□□ 0.27
MDH1-211ENST00000484538 LHX8Q68G74 356 aa16.72■□□□□ 0.27
MDH1-211ENST00000484538 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
MDH1-211ENST00000484538 COLQQ9Y215 455 aaPredicted RBP16.7■□□□□ 0.26
MDH1-211ENST00000484538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.68■□□□□ 0.26
MDH1-211ENST00000484538 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
MDH1-211ENST00000484538 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
MDH1-211ENST00000484538 POTEJP0CG39 1038 aa16.62■□□□□ 0.25
MDH1-211ENST00000484538 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
MDH1-211ENST00000484538 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
MDH1-211ENST00000484538 SEC24BO95487 1268 aa16.57■□□□□ 0.24
MDH1-211ENST00000484538 ILDR1Q86SU0 546 aaPredicted RBP16.57■□□□□ 0.24
MDH1-211ENST00000484538 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
MDH1-211ENST00000484538 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
MDH1-211ENST00000484538 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
MDH1-211ENST00000484538 OCEL1Q9H607 264 aa16.54■□□□□ 0.24
MDH1-211ENST00000484538 EFCAB3Q8N7B9 438 aa16.53■□□□□ 0.24
MDH1-211ENST00000484538 PDCD7Q8N8D1 485 aaKnown RBP16.53■□□□□ 0.24
MDH1-211ENST00000484538 PLCG2P16885 1265 aa16.52■□□□□ 0.24
MDH1-211ENST00000484538 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
MDH1-211ENST00000484538 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
MDH1-211ENST00000484538 STK25O00506 426 aa16.48■□□□□ 0.23
MDH1-211ENST00000484538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.234e-11■□□□□ 8.9
MDH1-211ENST00000484538 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
MDH1-211ENST00000484538 SOX12O15370 315 aa16.41■□□□□ 0.22
MDH1-211ENST00000484538 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
MDH1-211ENST00000484538 DPY19L2Q6NUT2 758 aa16.39■□□□□ 0.21
MDH1-211ENST00000484538 MAMSTRQ6ZN01 415 aa16.36■□□□□ 0.21
MDH1-211ENST00000484538 MS4A4AQ96JQ5 239 aa16.36■□□□□ 0.21
MDH1-211ENST00000484538 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
MDH1-211ENST00000484538 FBXO22Q8NEZ5 403 aa16.33■□□□□ 0.2
MDH1-211ENST00000484538 MFRPQ9BY79 579 aa16.33■□□□□ 0.2
MDH1-211ENST00000484538 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
MDH1-211ENST00000484538 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
MDH1-211ENST00000484538 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
MDH1-211ENST00000484538 L3MBTL3Q96JM7 780 aaPredicted RBP16.28■□□□□ 0.2
MDH1-211ENST00000484538 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
MDH1-211ENST00000484538 NLRP6P59044 892 aa16.26■□□□□ 0.19
MDH1-211ENST00000484538 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
MDH1-211ENST00000484538 TMEM121BQ9BXQ6 578 aaPredicted RBP16.23■□□□□ 0.19
MDH1-211ENST00000484538 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
MDH1-211ENST00000484538 BOLA1Q9Y3E2 137 aa16.22■□□□□ 0.19
MDH1-211ENST00000484538 PLCB2Q00722 1185 aa16.18■□□□□ 0.18
MDH1-211ENST00000484538 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
MDH1-211ENST00000484538 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.15■□□□□ 0.18
MDH1-211ENST00000484538 MICALL2Q8IY33 904 aa16.14■□□□□ 0.17
MDH1-211ENST00000484538 SLAIN1Q8ND83 568 aa16.13■□□□□ 0.17
MDH1-211ENST00000484538 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
MDH1-211ENST00000484538 PPP1R37O75864 691 aa16.1■□□□□ 0.17
MDH1-211ENST00000484538 G3V3G9 751 aa16.07■□□□□ 0.16
MDH1-211ENST00000484538 TMEM92Q6UXU6 159 aa16.04■□□□□ 0.16
MDH1-211ENST00000484538 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.16
MDH1-211ENST00000484538 GTPBP6O43824 516 aaPredicted RBP16.01■□□□□ 0.15
MDH1-211ENST00000484538 SPRYD3Q8NCJ5 442 aa16■□□□□ 0.15
MDH1-211ENST00000484538 LCE2DQ5TA82 110 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms