RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 PAXIP1Q6ZW49 1069 aaPredicted RBP5.24□□□□□ -1.57
ABCA4-206ENST00000484388 HS6ST3Q8IZP7 471 aa5.24□□□□□ -1.57
ABCA4-206ENST00000484388 FAM212AQ96EL1 285 aa5.24□□□□□ -1.57
ABCA4-206ENST00000484388 TAOK2Q9UL54 1235 aa5.24□□□□□ -1.57
ABCA4-206ENST00000484388 CHRM1P11229 460 aaPredicted RBP5.23□□□□□ -1.57
ABCA4-206ENST00000484388 SPRYD3Q8NCJ5 442 aa5.23□□□□□ -1.57
ABCA4-206ENST00000484388 RNF25Q96BH1 459 aaPredicted RBP5.23□□□□□ -1.57
ABCA4-206ENST00000484388 RIOK3O14730 519 aaKnown RBP5.21□□□□□ -1.58
ABCA4-206ENST00000484388 CFAP44Q96MT7 982 aa5.21□□□□□ -1.58
ABCA4-206ENST00000484388 RASEFQ8IZ41 740 aa5.2□□□□□ -1.58
ABCA4-206ENST00000484388 VGFO15240 615 aaPredicted RBP5.19□□□□□ -1.58
ABCA4-206ENST00000484388 SGIP1Q9BQI5 828 aa5.19□□□□□ -1.58
ABCA4-206ENST00000484388 KDM2AQ9Y2K7 1162 aa5.18□□□□□ -1.58
ABCA4-206ENST00000484388 BCANQ96GW7 911 aa5.17□□□□□ -1.58
ABCA4-206ENST00000484388 TSHZ2Q9NRE2 1034 aa5.16□□□□□ -1.58
ABCA4-206ENST00000484388 STK25O00506 426 aa5.14□□□□□ -1.59
ABCA4-206ENST00000484388 PYGBP11216 843 aa5.14□□□□□ -1.59
ABCA4-206ENST00000484388 NKX1-1Q15270 411 aaPredicted RBP5.14□□□□□ -1.59
ABCA4-206ENST00000484388 FARP1Q9Y4F1 1045 aaPredicted RBP5.14□□□□□ -1.59
ABCA4-206ENST00000484388 GTPBP6O43824 516 aaPredicted RBP5.13□□□□□ -1.59
ABCA4-206ENST00000484388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.12□□□□□ -1.59
ABCA4-206ENST00000484388 FXR2P51116 673 aaKnown RBP eCLIP5.12□□□□□ -1.59
ABCA4-206ENST00000484388 CHADLQ6NUI6 762 aa5.12□□□□□ -1.59
ABCA4-206ENST00000484388 ZFP91Q96JP5 570 aaPredicted RBP5.12□□□□□ -1.59
ABCA4-206ENST00000484388 ZNF467Q7Z7K2 595 aaPredicted RBP5.11□□□□□ -1.59
ABCA4-206ENST00000484388 BCL11BQ9C0K0 894 aaPredicted RBP5.11□□□□□ -1.59
ABCA4-206ENST00000484388 RYDENQ9NUL5 291 aaKnown RBP5.11□□□□□ -1.59
ABCA4-206ENST00000484388 PRKAR2AP13861 404 aaKnown RBP5.1□□□□□ -1.59
ABCA4-206ENST00000484388 TSPYL2Q9H2G4 693 aaPredicted RBP5.09□□□□□ -1.59
ABCA4-206ENST00000484388 STK24Q9Y6E0 443 aa5.09□□□□□ -1.59
ABCA4-206ENST00000484388 CCDC61Q9Y6R9 512 aa5.09□□□□□ -1.59
ABCA4-206ENST00000484388 PDAP1Q13442 181 aaKnown RBP5.07□□□□□ -1.6
ABCA4-206ENST00000484388 CHRDL2Q6WN34 429 aa5.07□□□□□ -1.6
ABCA4-206ENST00000484388 ZNF579Q8NAF0 562 aaKnown RBP5.07□□□□□ -1.6
ABCA4-206ENST00000484388 PAK3O75914 559 aaPredicted RBP5.05□□□□□ -1.6
ABCA4-206ENST00000484388 PIP4P2Q8N4L2 257 aa5.05□□□□□ -1.6
ABCA4-206ENST00000484388 PSEN1P49768 467 aa5.04□□□□□ -1.6
ABCA4-206ENST00000484388 PCDHB8Q9UN66 801 aa5.03□□□□□ -1.6
ABCA4-206ENST00000484388 PCDHB13Q9Y5F0 798 aa5.03□□□□□ -1.6
ABCA4-206ENST00000484388 KIF12Q96FN5 646 aa5.02□□□□□ -1.61
ABCA4-206ENST00000484388 MAP3K13O43283 966 aa5□□□□□ -1.61
ABCA4-206ENST00000484388 NBR1Q14596 966 aa5□□□□□ -1.61
ABCA4-206ENST00000484388 IFNL1Q8IU54 200 aa5□□□□□ -1.61
ABCA4-206ENST00000484388 PRKCSHP14314 528 aaPredicted RBP4.99□□□□□ -1.61
ABCA4-206ENST00000484388 MFRPQ9BY79 579 aa4.99□□□□□ -1.61
ABCA4-206ENST00000484388 SOX12O15370 315 aa4.98□□□□□ -1.61
ABCA4-206ENST00000484388 ZRANB1Q9UGI0 708 aa4.98□□□□□ -1.61
ABCA4-206ENST00000484388 CD44P16070 742 aaKnown RBP4.97□□□□□ -1.61
ABCA4-206ENST00000484388 NLRP6P59044 892 aa4.97□□□□□ -1.61
ABCA4-206ENST00000484388 TPRNQ4KMQ1 711 aa4.97□□□□□ -1.61
ABCA4-206ENST00000484388 P3H3Q8IVL6 736 aa4.96□□□□□ -1.62
ABCA4-206ENST00000484388 FBXO22Q8NEZ5 403 aa4.96□□□□□ -1.62
ABCA4-206ENST00000484388 EFCAB3Q8N7B9 438 aa4.95□□□□□ -1.62
ABCA4-206ENST00000484388 C19orf67A6NJJ6 358 aa4.94□□□□□ -1.62
ABCA4-206ENST00000484388 CADPS2Q86UW7 1296 aa4.94□□□□□ -1.62
ABCA4-206ENST00000484388 PHF12Q96QT6 1004 aa4.94□□□□□ -1.62
ABCA4-206ENST00000484388 CABP2Q9NPB3 220 aa4.94□□□□□ -1.62
ABCA4-206ENST00000484388 WDR70Q9NW82 654 aa4.94□□□□□ -1.62
ABCA4-206ENST00000484388 PHF8Q9UPP1 1060 aa4.93□□□□□ -1.62
ABCA4-206ENST00000484388 PPP1R37O75864 691 aa4.92□□□□□ -1.62
ABCA4-206ENST00000484388 POTEHQ6S545 545 aa4.91□□□□□ -1.62
ABCA4-206ENST00000484388 KCNV2Q8TDN2 545 aa4.9□□□□□ -1.63
ABCA4-206ENST00000484388 MS4A3Q96HJ5 214 aa4.9□□□□□ -1.63
ABCA4-206ENST00000484388 MS4A4AQ96JQ5 239 aa4.9□□□□□ -1.63
ABCA4-206ENST00000484388 TMEM106CQ9BVX2 250 aa4.9□□□□□ -1.63
ABCA4-206ENST00000484388 TIE1P35590 1138 aa4.89□□□□□ -1.63
ABCA4-206ENST00000484388 CLCN6P51797 869 aa4.88□□□□□ -1.63
ABCA4-206ENST00000484388 GOLGA2Q08379 1002 aa4.88□□□□□ -1.63
ABCA4-206ENST00000484388 ILDR1Q86SU0 546 aaPredicted RBP4.88□□□□□ -1.63
ABCA4-206ENST00000484388 ARHGEF1Q92888 912 aaKnown RBP4.88□□□□□ -1.63
ABCA4-206ENST00000484388 PDE4AP27815 886 aa4.87□□□□□ -1.63
ABCA4-206ENST00000484388 MKRN3Q13064 507 aaKnown RBP4.87□□□□□ -1.63
ABCA4-206ENST00000484388 E2F4Q16254 413 aa4.87□□□□□ -1.63
ABCA4-206ENST00000484388 TRPC6Q9Y210 931 aa4.87□□□□□ -1.63
ABCA4-206ENST00000484388 TTLL13PA6NNM8 815 aa4.86□□□□□ -1.63
ABCA4-206ENST00000484388 MFSD10Q14728 455 aa4.86□□□□□ -1.63
ABCA4-206ENST00000484388 CRISPLD2Q9H0B8 497 aa4.86□□□□□ -1.63
ABCA4-206ENST00000484388 NCKAP5LQ9HCH0 1330 aa4.86□□□□□ -1.63
ABCA4-206ENST00000484388 BMP2KQ9NSY1 1161 aaPredicted RBP4.85□□□□□ -1.63
ABCA4-206ENST00000484388 ARIH1Q9Y4X5 557 aaPredicted RBP4.85□□□□□ -1.63
ABCA4-206ENST00000484388 GALR2O43603 387 aaPredicted RBP4.83□□□□□ -1.64
ABCA4-206ENST00000484388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.83□□□□□ -1.64
ABCA4-206ENST00000484388 LARP6Q9BRS8 491 aaKnown RBP4.83□□□□□ -1.64
ABCA4-206ENST00000484388 TULP1O00294 542 aaPredicted RBP4.82□□□□□ -1.64
ABCA4-206ENST00000484388 CAMK2BQ13554 666 aa4.82□□□□□ -1.64
ABCA4-206ENST00000484388 DDX27Q96GQ7 796 aaKnown RBP4.82□□□□□ -1.64
ABCA4-206ENST00000484388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.82□□□□□ -1.64
ABCA4-206ENST00000484388 TRIM35Q9UPQ4 493 aa4.82□□□□□ -1.64
ABCA4-206ENST00000484388 TESPA1A2RU30 521 aaPredicted RBP4.81□□□□□ -1.64
ABCA4-206ENST00000484388 LMOD2Q6P5Q4 547 aa4.81□□□□□ -1.64
ABCA4-206ENST00000484388 HAX1O00165 279 aa4.8□□□□□ -1.64
ABCA4-206ENST00000484388 GPHNQ9NQX3 736 aaPredicted RBP4.8□□□□□ -1.64
ABCA4-206ENST00000484388 EVX2Q03828 476 aa4.79□□□□□ -1.64
ABCA4-206ENST00000484388 IER5LQ5T953 404 aa4.79□□□□□ -1.64
ABCA4-206ENST00000484388 ASTLQ6HA08 431 aaPredicted RBP4.79□□□□□ -1.64
ABCA4-206ENST00000484388 SEMA3EO15041 775 aa4.78□□□□□ -1.64
ABCA4-206ENST00000484388 ATMINO43313 823 aaPredicted RBP4.78□□□□□ -1.64
ABCA4-206ENST00000484388 ATN1P54259 1190 aaPredicted RBP4.78□□□□□ -1.64
ABCA4-206ENST00000484388 SMYD5Q6GMV2 418 aa4.78□□□□□ -1.64
ABCA4-206ENST00000484388 PDCD7Q8N8D1 485 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms