RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 DCBLD2Q96PD2 775 aa15.56■□□□□ 0.08
SCAF11-207ENST00000484275 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-207ENST00000484275 MS4A3Q96HJ5 214 aa15.54■□□□□ 0.08
SCAF11-207ENST00000484275 VASPP50552 380 aaPredicted RBP15.53■□□□□ 0.08
SCAF11-207ENST00000484275 KIF12Q96FN5 646 aa15.49■□□□□ 0.07
SCAF11-207ENST00000484275 MAP3K13O43283 966 aa15.43■□□□□ 0.06
SCAF11-207ENST00000484275 LHX8Q68G74 356 aa15.4■□□□□ 0.06
SCAF11-207ENST00000484275 PELP1Q8IZL8 1130 aaKnown RBP15.39■□□□□ 0.05
SCAF11-207ENST00000484275 TRPC6Q9Y210 931 aa15.38■□□□□ 0.05
SCAF11-207ENST00000484275 FAM212AQ96EL1 285 aa15.37■□□□□ 0.05
SCAF11-207ENST00000484275 ASTLQ6HA08 431 aaPredicted RBP15.36■□□□□ 0.05
SCAF11-207ENST00000484275 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-207ENST00000484275 KLHL34Q8N239 644 aa15.34■□□□□ 0.05
SCAF11-207ENST00000484275 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-207ENST00000484275 DCAF8Q5TAQ9 597 aa15.3■□□□□ 0.04
SCAF11-207ENST00000484275 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
SCAF11-207ENST00000484275 PCDHB13Q9Y5F0 798 aa15.27■□□□□ 0.04
SCAF11-207ENST00000484275 ATN1P54259 1190 aaPredicted RBP15.26■□□□□ 0.03
SCAF11-207ENST00000484275 SGIP1Q9BQI5 828 aa15.24■□□□□ 0.03
SCAF11-207ENST00000484275 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
SCAF11-207ENST00000484275 PYGBP11216 843 aa15.23■□□□□ 0.03
SCAF11-207ENST00000484275 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
SCAF11-207ENST00000484275 TIE1P35590 1138 aa15.21■□□□□ 0.03
SCAF11-207ENST00000484275 METRNQ9UJH8 293 aa15.18■□□□□ 0.02
SCAF11-207ENST00000484275 TTLL13PA6NNM8 815 aa15.17■□□□□ 0.02
SCAF11-207ENST00000484275 SLC39A7Q92504 469 aa15.16■□□□□ 0.02
SCAF11-207ENST00000484275 SPOCK2Q92563 424 aa15.15■□□□□ 0.02
SCAF11-207ENST00000484275 C7P10643 843 aa15.14■□□□□ 0.01
SCAF11-207ENST00000484275 GSE1Q14687 1217 aa15.14■□□□□ 0.01
SCAF11-207ENST00000484275 PCDHB8Q9UN66 801 aa15.1■□□□□ 0.01
SCAF11-207ENST00000484275 POTEFA5A3E0 1075 aa15.09■□□□□ 0.01
SCAF11-207ENST00000484275 POTEJP0CG39 1038 aa15.07■□□□□ 0
SCAF11-207ENST00000484275 OTUD5Q96G74 571 aa15.06■□□□□ 0
SCAF11-207ENST00000484275 TMEM106CQ9BVX2 250 aa15.06■□□□□ 0
SCAF11-207ENST00000484275 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
SCAF11-207ENST00000484275 CHRM1P11229 460 aaPredicted RBP15.04■□□□□ -0
SCAF11-207ENST00000484275 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
SCAF11-207ENST00000484275 COLQQ9Y215 455 aaPredicted RBP15□□□□□ -0.01
SCAF11-207ENST00000484275 IER5LQ5T953 404 aa14.94□□□□□ -0.02
SCAF11-207ENST00000484275 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
SCAF11-207ENST00000484275 SEC24BO95487 1268 aa14.9□□□□□ -0.02
SCAF11-207ENST00000484275 IRX5P78411 483 aaPredicted RBP14.86□□□□□ -0.03
SCAF11-207ENST00000484275 PSEN1P49768 467 aa14.85□□□□□ -0.03
SCAF11-207ENST00000484275 MAMSTRQ6ZN01 415 aa14.81□□□□□ -0.04
SCAF11-207ENST00000484275 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
SCAF11-207ENST00000484275 PLCG2P16885 1265 aa14.78□□□□□ -0.04
SCAF11-207ENST00000484275 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
SCAF11-207ENST00000484275 SCUBE2Q9NQ36 999 aa14.77□□□□□ -0.05
SCAF11-207ENST00000484275 OCEL1Q9H607 264 aa14.76□□□□□ -0.05
SCAF11-207ENST00000484275 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
SCAF11-207ENST00000484275 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
SCAF11-207ENST00000484275 GOLGA2Q08379 1002 aa14.69□□□□□ -0.06
SCAF11-207ENST00000484275 MKRN3Q13064 507 aaKnown RBP14.69□□□□□ -0.06
SCAF11-207ENST00000484275 CABP2Q9NPB3 220 aa14.68□□□□□ -0.06
SCAF11-207ENST00000484275 RIOK3O14730 519 aaKnown RBP14.64□□□□□ -0.07
SCAF11-207ENST00000484275 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-207ENST00000484275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.071e-8■■■□□ 18.1
SCAF11-207ENST00000484275 LCE2DQ5TA82 110 aaPredicted RBP14.59□□□□□ -0.07
SCAF11-207ENST00000484275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-207ENST00000484275 PKD2Q13563 968 aa14.57□□□□□ -0.08
SCAF11-207ENST00000484275 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
SCAF11-207ENST00000484275 SLAIN1Q8ND83 568 aa14.57□□□□□ -0.08
SCAF11-207ENST00000484275 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-207ENST00000484275 EFCAB3Q8N7B9 438 aa14.56□□□□□ -0.08
SCAF11-207ENST00000484275 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
SCAF11-207ENST00000484275 ECM2O94769 699 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-207ENST00000484275 FAM163AQ96GL9 167 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-207ENST00000484275 POTEMA6NI47 508 aa14.48□□□□□ -0.09
SCAF11-207ENST00000484275 L3MBTL3Q96JM7 780 aaPredicted RBP14.48□□□□□ -0.09
SCAF11-207ENST00000484275 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.48□□□□□ -0.09
SCAF11-207ENST00000484275 RGL2O15211 777 aa14.46□□□□□ -0.09
SCAF11-207ENST00000484275 POTEGQ6S5H5 508 aa14.46□□□□□ -0.09
SCAF11-207ENST00000484275 C3orf67Q6ZVT6 689 aa14.42□□□□□ -0.1
SCAF11-207ENST00000484275 BCL11BQ9C0K0 894 aaPredicted RBP14.41□□□□□ -0.1
SCAF11-207ENST00000484275 BOLA1Q9Y3E2 137 aa14.4□□□□□ -0.1
SCAF11-207ENST00000484275 MS4A4AQ96JQ5 239 aa14.39□□□□□ -0.11
SCAF11-207ENST00000484275 SOX12O15370 315 aa14.38□□□□□ -0.11
SCAF11-207ENST00000484275 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
SCAF11-207ENST00000484275 STK24Q9Y6E0 443 aa14.36□□□□□ -0.11
SCAF11-207ENST00000484275 ST18O60284 1047 aa14.35□□□□□ -0.11
SCAF11-207ENST00000484275 TAOK2Q9UL54 1235 aa14.35□□□□□ -0.11
SCAF11-207ENST00000484275 STK25O00506 426 aa14.34□□□□□ -0.11
SCAF11-207ENST00000484275 TMEM121BQ9BXQ6 578 aaPredicted RBP14.34□□□□□ -0.11
SCAF11-207ENST00000484275 G3V3G9 751 aa14.3□□□□□ -0.12
SCAF11-207ENST00000484275 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
SCAF11-207ENST00000484275 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
SCAF11-207ENST00000484275 MICALL2Q8IY33 904 aa14.27□□□□□ -0.13
SCAF11-207ENST00000484275 SNPHO15079 494 aa14.24□□□□□ -0.13
SCAF11-207ENST00000484275 NLRP6P59044 892 aa14.24□□□□□ -0.13
SCAF11-207ENST00000484275 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
SCAF11-207ENST00000484275 HOXB3P14651 431 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-207ENST00000484275 MARVELD3Q96A59 401 aa14.16□□□□□ -0.14
SCAF11-207ENST00000484275 PCDH10Q9P2E7 1040 aa14.15□□□□□ -0.14
SCAF11-207ENST00000484275 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
SCAF11-207ENST00000484275 HS6ST3Q8IZP7 471 aa14.11□□□□□ -0.15
SCAF11-207ENST00000484275 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
SCAF11-207ENST00000484275 PPP1R37O75864 691 aa14.07□□□□□ -0.16
SCAF11-207ENST00000484275 CHGAP10645 457 aaKnown RBP14.06□□□□□ -0.16
SCAF11-207ENST00000484275 EMP3P54852 163 aa14.03□□□□□ -0.16
SCAF11-207ENST00000484275 POTEB3A0JP26 581 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms