RNA–Protein interactions for RNA: ENST00000484179.5

USP34-215, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 927 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-215ENST00000484179 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
USP34-215ENST00000484179 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
USP34-215ENST00000484179 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
USP34-215ENST00000484179 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
USP34-215ENST00000484179 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
USP34-215ENST00000484179 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
USP34-215ENST00000484179 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
USP34-215ENST00000484179 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
USP34-215ENST00000484179 KIF12Q96FN5 646 aa12.57□□□□□ -0.4
USP34-215ENST00000484179 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
USP34-215ENST00000484179 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
USP34-215ENST00000484179 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
USP34-215ENST00000484179 NUBP1P53384 320 aa12.52□□□□□ -0.41
USP34-215ENST00000484179 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
USP34-215ENST00000484179 ATMINO43313 823 aaPredicted RBP12.51□□□□□ -0.41
USP34-215ENST00000484179 MAP3K13O43283 966 aa12.49□□□□□ -0.41
USP34-215ENST00000484179 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
USP34-215ENST00000484179 C7P10643 843 aa12.45□□□□□ -0.42
USP34-215ENST00000484179 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
USP34-215ENST00000484179 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
USP34-215ENST00000484179 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
USP34-215ENST00000484179 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
USP34-215ENST00000484179 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
USP34-215ENST00000484179 TIE1P35590 1138 aa12.4□□□□□ -0.42
USP34-215ENST00000484179 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
USP34-215ENST00000484179 BMP2KQ9NSY1 1161 aaPredicted RBP12.4□□□□□ -0.42
USP34-215ENST00000484179 TRPC6Q9Y210 931 aa12.4□□□□□ -0.42
USP34-215ENST00000484179 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
USP34-215ENST00000484179 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
USP34-215ENST00000484179 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
USP34-215ENST00000484179 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
USP34-215ENST00000484179 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
USP34-215ENST00000484179 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
USP34-215ENST00000484179 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
USP34-215ENST00000484179 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
USP34-215ENST00000484179 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
USP34-215ENST00000484179 PYGBP11216 843 aa12.24□□□□□ -0.45
USP34-215ENST00000484179 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
USP34-215ENST00000484179 GSE1Q14687 1217 aa12.23□□□□□ -0.45
USP34-215ENST00000484179 IER5LQ5T953 404 aa12.22□□□□□ -0.45
USP34-215ENST00000484179 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.45
USP34-215ENST00000484179 SEC24BO95487 1268 aa12.19□□□□□ -0.46
USP34-215ENST00000484179 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
USP34-215ENST00000484179 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
USP34-215ENST00000484179 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
USP34-215ENST00000484179 CHRM1P11229 460 aaPredicted RBP12.14□□□□□ -0.47
USP34-215ENST00000484179 SPOCK2Q92563 424 aa12.13□□□□□ -0.47
USP34-215ENST00000484179 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
USP34-215ENST00000484179 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
USP34-215ENST00000484179 PLCG2P16885 1265 aa12.07□□□□□ -0.48
USP34-215ENST00000484179 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
USP34-215ENST00000484179 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
USP34-215ENST00000484179 OCEL1Q9H607 264 aa12.02□□□□□ -0.49
USP34-215ENST00000484179 PSEN1P49768 467 aa11.99□□□□□ -0.49
USP34-215ENST00000484179 ST18O60284 1047 aa11.97□□□□□ -0.49
USP34-215ENST00000484179 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
USP34-215ENST00000484179 PDAP1Q13442 181 aaKnown RBP11.95□□□□□ -0.5
USP34-215ENST00000484179 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
USP34-215ENST00000484179 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
USP34-215ENST00000484179 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
USP34-215ENST00000484179 PDCD7Q8N8D1 485 aaKnown RBP11.89□□□□□ -0.51
USP34-215ENST00000484179 MMRN1Q13201 1228 aa11.86□□□□□ -0.51
USP34-215ENST00000484179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.512e-10■■□□□ 14.3
USP34-215ENST00000484179 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
USP34-215ENST00000484179 SPNS2Q8IVW8 549 aa11.84□□□□□ -0.51
USP34-215ENST00000484179 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
USP34-215ENST00000484179 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
USP34-215ENST00000484179 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
USP34-215ENST00000484179 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
USP34-215ENST00000484179 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.53
USP34-215ENST00000484179 SNPHO15079 494 aa11.75□□□□□ -0.53
USP34-215ENST00000484179 RIOK3O14730 519 aaKnown RBP11.74□□□□□ -0.53
USP34-215ENST00000484179 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
USP34-215ENST00000484179 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
USP34-215ENST00000484179 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
USP34-215ENST00000484179 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
USP34-215ENST00000484179 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
USP34-215ENST00000484179 G3V3G9 751 aa11.68□□□□□ -0.54
USP34-215ENST00000484179 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
USP34-215ENST00000484179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.65□□□□□ -0.54
USP34-215ENST00000484179 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
USP34-215ENST00000484179 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
USP34-215ENST00000484179 SOX12O15370 315 aa11.62□□□□□ -0.55
USP34-215ENST00000484179 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
USP34-215ENST00000484179 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
USP34-215ENST00000484179 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
USP34-215ENST00000484179 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
USP34-215ENST00000484179 KRTAP3-3Q9BYR6 98 aa11.56□□□□□ -0.56
USP34-215ENST00000484179 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
USP34-215ENST00000484179 EMP3P54852 163 aa11.55□□□□□ -0.56
USP34-215ENST00000484179 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
USP34-215ENST00000484179 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
USP34-215ENST00000484179 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
USP34-215ENST00000484179 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
USP34-215ENST00000484179 BCL11BQ9C0K0 894 aaPredicted RBP11.53□□□□□ -0.56
USP34-215ENST00000484179 PKD2Q13563 968 aa11.5□□□□□ -0.57
USP34-215ENST00000484179 HS3ST6Q96QI5 342 aa11.5□□□□□ -0.57
USP34-215ENST00000484179 HOXB3P14651 431 aaPredicted RBP11.49□□□□□ -0.57
USP34-215ENST00000484179 NLRP6P59044 892 aa11.49□□□□□ -0.57
USP34-215ENST00000484179 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms